maker-scaffold383_size189472-snap-gene-0.42-mRNA-1, maker-scaffold383_size189472-snap-gene-0.42-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold383_size189472-snap-gene-0.42-mRNA-1
Unique Namemaker-scaffold383_size189472-snap-gene-0.42-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold383_size189472supercontigscaffold383_size189472:183921..187968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
structural maintenance of chromosomes protein 1amaker-scaffold383_size189472-snap-gene-0.42Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:exon:1668maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:exon:1668Tigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:exon:1669maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:exon:1669Tigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:three_prime_utrmaker-scaffold383_size189472-snap-gene-0.42-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cdsmaker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cdsmaker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cds-2007233Tigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:three_prime_utrmaker-scaffold383_size189472-snap-gene-0.42-mRNA-1:three_prime_utr-2007238Tigriopus kingsejongensisexon
maker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cdsmaker-scaffold383_size189472-snap-gene-0.42-mRNA-1:cds-2007239Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2007236auto2007236Tigriopus kingsejongensispolypeptide
polypeptide-auto2007240auto2007240Tigriopus kingsejongensispolypeptide
Tk11349Tk11349Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11349

>Tk11349 ID=Tk11349|Name=Tk11349|organism=Tigriopus kingsejongensis|type=polypeptide|length=1270bp
LRQQQRLKPASINLRRGRGRFEKRIRANLRHRAAKMPAQLTYIELENFKS
YKGYLRLGPLASFVAVIGPNGSGKSNFMDAISFVMGEKTVSLRVKKLSDL
IHGASINRPVANRAFVSAIFQNEDGSETKFTRSIISSSSDHKINGEAVSS
QVYLRELEKLGINVNAKNFLVFQGAVESIAMKNPKERTALFEEISGSGAL
KKEYERLKAEMMDAEENTQFTYQKKKTLGMERKEAKLEKAEAEKYQKLKD
TVQSRQVELQLFKLFHNERRIKECETTAEETKKSIQKIEKRKEKSEEKLK
DAKKDFGKSQREFTKVDSDIREMENEIQKKRPAFIKAKEKTAHMQKKLDN
AKKSLKQAEKAYKSHQADVQELETDLSANEKRKDEYDAITANESQSQGRN
LQLEDKQIIEYHKLKEKAGKESARYMGELDSINREHKSDQDQLDTENRKK
YELESKLKTKGHELEESQKRLEKLIEHIRSSEAQLDEQQKIFNELQGDVG
CSKDRIQQLQQDLDEATSELGDARVDKHEENRRKKKQEIVENFKRLYPGV
FDRMINMCQPIHKKYNVAITKQLGRYMEAIIVDNESTARQCIQYLKDQML
EPETFLPLDYIQAKPLKERLRSINNPKGVKLLYDVLRYEPSEIRRAVLFV
TNNALVCETPDDAMKVAYELEDGQRYDAVALDGTFYQKSGIISGGSMDLA
RKAKRWDDKQVSTLKSKKEKLTEELRQAMKNSRKESEIQTIQSQISGLKT
RLKYSVSDRDNTKKKIEALQRQMDKMREELDTFGPNIREIEGLMRERETK
IEDTKDKMNTVEDRIFAKFCEQIGVVNIRMYEERELKTQQDRAKKKMEFE
NQINRITTQLEYERKREDQLRANMEKFERTVQDDEDSLESAKKAEQVQMS
EIDSDMKEVDKLKHRKSFLKSEMDKMEEDVNTVRRDVGLIAKELQQANKA
ANQSENQVEQEKANRHSILIQCKMDNIQVPMKKGNLEEIDDDASEDPSIE
VSSSQPSHIIYEKESKIVIEYGSLEEGLTELEDNDDVRKIEKSLEKQINE
LQNTITRIQAPNMRAMQKLDEAREKLEETNKEFDMVRKKAKTAKQVFERL
KQERYDLFMKCFEHVSNTIDEIYKSLAKNQSAQAFLGPDNPEEPYLEGIN
YNCVAPGKRFQPMSNLSGGEKTIAALALLFAIHSYQPAPFFVLDEIDAAL
DNTNIGKVASYISNRTGTGMNVIVISLKDEFYSHADGLIGVCPDNSMGEN
ADCLVSKVLTLDLSKYPKAT
back to top

mRNA from alignment at scaffold383_size189472:183921..187968-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold383_size189472-snap-gene-0.42-mRNA-1 ID=maker-scaffold383_size189472-snap-gene-0.42-mRNA-1|Name=maker-scaffold383_size189472-snap-gene-0.42-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4048bp|location=Sequence derived from alignment at scaffold383_size189472:183921..187968- (Tigriopus kingsejongensis)
CAGGCTTTAGCTGCTGCCTGGTCACTCTGCTGAGATTGGGCCGTAGAGAC
TTCAGAGTTCGGCGTCAAATTGCGCCAGCAGCAGCGCTTGAAGCCCGCCT
CAATAAATCTCCGGCGAGGCCGAGGCCGGTTTGAGAAGAGAATCCGAGCC
AATCTCCGGCATCGAGCGGCCAAGATGCCGGCCCAACTGACTTACATCGA
GTTGGAGAACTTCAAGTCCTACAAGGGCTACCTACGGCTGGGTCCCCTGG
CCTCCTTCGTGGCCGTCATCGGGCCCAATGGATCGGGCAAGTCCAACTTC
ATGGACGCCATCTCCTTCGTCATGGGGGAGAAGACGGTTTCGTTGCGCGT
TAAGAAACTCTCCGACCTAATCCATGGAGCCTCCATCAATCGGCCTGTGG
CCAATCGGGCCTTCGTTTCAGCCATTTTCCAGGTGAGTCCAGCCCTGAGT
TCCGATCTGCTTGAGTCTGGCCCATGTCTAATGTGTCGTTTCTTTTCTCG
GTCAGAATGAGGATGGCAGCGAGACCAAGTTCACCCGCTCCATCATCAGC
TCTTCCTCGGACCACAAGATCAACGGTGAGGCCGTGTCCTCGCAGGTGTA
TCTACGTGAGCTCGAGAAGCTGGGCATCAACGTGAACGCTAAGAACTTCT
TGGTTTTCCAAGGTGCGGTCGAATCGATCGCCATGAAAAATCCCAAGGAA
AGGACCGCTCTCTTCGAGGAGATCTCCGGCTCGGGTGCTCTCAAGAAGGA
GTACGAACGCCTCAAGGCTGAAATGATGGATGCCGAAGAGAATACGCAGT
TCACTTACCAGAAGAAAAAGACCCTGGGCATGGAGCGCAAAGAGGCCAAG
CTGGAGAAGGCCGAGGCCGAAAAGTATCAGAAGCTCAAGGATACAGTTCA
GTCGCGCCAGGTGGAGTTGCAGCTTTTCAAGCTATTCCACAACGAGCGAC
GAATCAAAGAGTGCGAGACGACGGCTGAAGAGACCAAGAAGTCCATTCAA
AAGATCGAGAAGCGCAAGGAAAAATCCGAGGAGAAACTGAAAGACGCCAA
GAAGGACTTTGGCAAGAGCCAACGGGAGTTCACCAAGGTCGACTCTGACA
TTCGCGAGATGGAGAACGAGATCCAAAAGAAGCGCCCGGCCTTCATCAAA
GCCAAAGAGAAGACGGCTCACATGCAAAAAAAGCTGGACAACGCCAAGAA
ATCGCTCAAGCAAGCTGAGAAAGCCTATAAATCCCACCAGGCAGATGTAC
AAGAGTTAGAGACGGATCTGAGTGCCAATGAGAAGCGCAAAGACGAGTAC
GACGCTATCACGGCCAATGAATCTCAATCCCAAGGGCGGAACCTCCAGTT
GGAGGACAAACAGATCATCGAGTACCATAAATTGAAGGAGAAGGCGGGCA
AGGAGTCGGCTAGGTACATGGGTGAGCTGGATTCCATCAATCGGGAGCAC
AAATCCGACCAGGACCAATTGGATACAGAGAATCGGAAAAAGTACGAATT
GGAGAGCAAGCTCAAGACCAAGGGTCACGAGCTAGAGGAATCTCAAAAGC
GCCTCGAGAAGCTCATCGAGCACATCCGCTCTTCCGAGGCCCAATTAGAC
GAGCAGCAGAAGATCTTCAACGAGCTCCAAGGTGATGTGGGCTGTAGTAA
GGATCGTATCCAACAGCTCCAACAGGACCTCGATGAGGCCACTTCCGAGT
TGGGTGACGCCAGAGTCGACAAACATGAAGAGAATCGTCGGAAGAAGAAG
CAAGAGATTGTTGAGAACTTCAAACGTCTGTATCCGGGCGTGTTCGATCG
AATGATCAATATGTGTCAGCCCATTCACAAAAAGTACAACGTCGCCATCA
CCAAGCAACTGGGCCGCTATATGGAAGCCATCATCGTTGACAACGAGTCC
ACCGCTCGACAGTGCATCCAGTACCTGAAGGATCAGATGTTGGAGCCCGA
GACCTTCCTCCCATTGGACTATATCCAAGCCAAGCCCCTCAAGGAGCGTC
TGCGCTCCATCAACAATCCCAAGGGTGTTAAACTTCTCTATGACGTCCTT
CGCTACGAACCGAGTGAGATCCGACGGGCAGTTTTGTTCGTCACGAACAA
CGCCTTGGTGTGTGAAACGCCCGACGATGCCATGAAAGTGGCCTACGAGC
TCGAGGACGGTCAAAGGTACGATGCCGTAGCCTTGGACGGAACGTTTTAT
CAGAAATCGGGCATCATTTCGGGCGGGAGTATGGACTTGGCCCGGAAAGC
CAAGCGATGGGACGATAAGCAAGTGTCGACGTTAAAGTCCAAGAAAGAGA
AGCTCACGGAAGAGTTGCGACAGGCCATGAAAAACTCGCGGAAAGAGTCT
GAAATTCAAACCATTCAGAGCCAAATCAGTGGTCTCAAGACAAGACTCAA
ATACTCTGTGAGCGATCGAGACAACACCAAGAAGAAGATCGAAGCCCTTC
AAAGACAAATGGATAAGATGAGGGAAGAGCTGGACACGTTTGGTCCCAAC
ATTCGAGAGATTGAAGGCCTTATGAGGGAGAGGGAGACCAAAATTGAGGA
CACAAAGGATAAAATGAACACTGTCGAGGATCGTATCTTCGCCAAGTTTT
GCGAGCAAATTGGTGTCGTCAACATCCGAATGTACGAGGAGAGGGAGCTC
AAGACTCAACAAGATCGAGCGAAGAAGAAGATGGAGTTCGAGAATCAGAT
CAATCGCATCACCACCCAATTGGAGTACGAGCGAAAGCGTGAGGATCAGT
TAAGAGCCAACATGGAGAAATTTGAGAGGACTGTCCAGGACGACGAAGAC
AGCCTCGAGTCTGCCAAGAAGGCGGAGCAGGTTCAGATGAGCGAGATTGA
CTCGGACATGAAGGAGGTGGACAAGCTAAAACACAGAAAGTCCTTCCTCA
AGAGCGAGATGGACAAGATGGAAGAGGATGTGAACACTGTGCGACGTGAC
GTGGGCCTCATTGCCAAAGAGTTGCAGCAAGCCAACAAGGCGGCTAACCA
GTCCGAGAATCAAGTAGAGCAAGAAAAAGCCAACCGACACAGTATTCTGA
TCCAGTGCAAAATGGACAACATTCAAGTGCCCATGAAGAAGGGCAATCTC
GAGGAAATTGACGATGACGCGAGCGAGGATCCAAGTATAGAGGTATCTTC
CAGTCAGCCCAGTCATATCATTTACGAGAAAGAGTCCAAGATCGTCATCG
AGTACGGATCTTTGGAGGAAGGCCTCACGGAGCTCGAAGACAACGACGAT
GTACGTAAAATCGAGAAAAGCCTCGAGAAGCAAATCAACGAGCTGCAAAA
CACCATTACGAGAATTCAAGCCCCCAACATGAGAGCCATGCAGAAGCTGG
ACGAGGCCCGAGAGAAGTTGGAGGAGACCAACAAAGAATTCGACATGGTC
AGGAAGAAGGCCAAGACAGCCAAGCAAGTGTTTGAGAGGCTCAAGCAGGA
GAGGTACGACTTATTCATGAAATGCTTCGAGCACGTGTCCAACACCATCG
ACGAAATCTACAAGTCCCTGGCCAAGAATCAGTCGGCTCAGGCTTTCCTC
GGACCGGACAACCCCGAAGAGCCCTACTTGGAGGGCATCAACTATAATTG
CGTGGCTCCCGGCAAGCGCTTCCAACCCATGTCCAACTTGTCTGGTGGCG
AGAAGACCATTGCAGCCCTGGCCCTGCTGTTTGCCATCCACTCGTACCAA
CCCGCCCCATTTTTCGTCCTGGATGAGATCGACGCCGCCCTGGACAACAC
CAATATCGGCAAGGTGGCCTCGTACATTAGCAATCGAACGGGCACGGGAA
TGAACGTGATCGTGATCTCACTCAAAGACGAGTTCTATTCCCACGCCGAT
GGGCTCATCGGCGTTTGCCCGGACAACTCCATGGGCGAGAATGCAGACTG
CCTCGTGAGCAAAGTGCTCACCCTCGACCTTTCGAAATACCCCAAGGCCA
CCTAAAGTGAACCGTTATAACCCAAGTATTCCCAAGCGGAAATGTAAATT
TAAATGAGTTGTTTAGTAGCCTCGGCTGTAGCTTGTAAATAAAGTGCA
back to top
Add to Basket