maker-scaffold401_size182380-snap-gene-0.21-mRNA-1, maker-scaffold401_size182380-snap-gene-0.21-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold401_size182380-snap-gene-0.21-mRNA-1
Unique Namemaker-scaffold401_size182380-snap-gene-0.21-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold401_size182380supercontigscaffold401_size182380:167806..174658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
twitchin isoform x9maker-scaffold401_size182380-snap-gene-0.21Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:137maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:137Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:138maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:138Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:139maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:139Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:140maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:140Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:141maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:141Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:142maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:142Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:143maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:143Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:144maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:exon:144Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005261Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005262Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005263Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005264Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005265Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005266Tigriopus kingsejongensisexon
maker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cdsmaker-scaffold401_size182380-snap-gene-0.21-mRNA-1:cds-2005267Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2005268auto2005268Tigriopus kingsejongensispolypeptide
Tk02134Tk02134Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02134

>Tk02134 ID=Tk02134|Name=Tk02134|organism=Tigriopus kingsejongensis|type=polypeptide|length=1690bp
KKEIGSSVWNRVNDYNLPDVEYTVSDLTEGREYQFRIRAVNSTGQSEPCP
ATNPVRVGELDDGESPDFIRFLQNAGAGLGKSEKNGKFILTITELWDIDQ
GEYTCQAYNHHGYSSTHCRMKVGAPPKIEYIPSELHYPEGDNSKIKVKWS
GDLPFDIEVYRDGKLITESSKFKMSIFDEFLIIFMREISIDFAGRYTIKV
SNESGSAEGSFNMYISGLPGAPIGPLETTAITSHTCNLSWQPPSHDGGSK
VTHYVVERRDFQSQQWITISSFCKTTTFGVQGLTENQEYYFRVRAANANG
SGPPLEGVNPIKAKPPYDVPGPPGMPNILAVGGDFVNLSWERPESDGGSR
IKGYWIEKREAGYNLWQKVNTYNHSATQINITNLIEGRQYEFRVMAENDA
GIGTPSSNSSSVVAKDPEDPNPPEIIQPLKNIHCVEEKHARFACRVNGYP
KPKVTWLKGARELFDGAKHEIIVTGNLYELVVKGVYGEDEDTYTARAVNT
GGTKSTKADLKIKTAPKLNVPPRFRGTADFDKGENGSIKIPFTGNPKPKI
TWTKDGEKIESGARFQVVTEERHALLTIVDVSKADTGTYTITAENELGQD
FAIIHVQVSDRPDPPRFPICGQIGADSLVVEWQPPAWDGGSAITNYVVEK
QELPMTAWTRCGHTRFNLFPVTDLTPAHEYRFRIFAQNVHGQSASSEETS
IVTTLGVVQKKKANTKYEIDPATGKKIRGQKCEVKDYDQFVFDIYSKYIP
QPVDIKTRDSVYDQYDILEEIGTGAFGVVHRCREIRSGHVYAAKFIPISH
AMEKALIRKEIDIMNHLHHCKLINLHDAYEDEDEMVLIFEFLSGGELFEQ
ITSEGYVMSEAEVINYMRQICEGVKHMHERNIIHLDIKPENIMCQTSKST
NIKIIDFGLATKLDPNELVKISTGTAEFAAPEIVEREPVGFFTDMWSIGV
LSYVLLSGLSPFAGANDIDTLKNVKSCDWEFDDEAFRNVSEEGRDFIRKL
LIKHKEKRMTAHECLQHSWLTGDHSHRTLEIARQRFFAIRDKIRQKYANW
NDYKLPLGRLSEYSSLRKLQMEKYRIQEVLVDRKSAAPRFVIKPISTFAI
EGHSARFTCRIISMTNVTVSWYHNNVELRQSVKYMKRYSGDDYTFIINRT
KLSDRGEFIIRAENNCGVTEEIVFLNVQAAPKEITRYTPEPLPVRKREPR
TIKLYKQERTSAPMFTFHLRPRVIQGGQTCKLLACLTGKPHPSIKWMKGG
KELDPSKYPITHTDGVITIEIINAQPGDSGKYKCIATNEKGSDASDCVVI
VEGANMSDEQRNMSDQILYSDKRFVDHCQRVVHPPANTVDPADKKKKNKA
YRRNDSTTSSTGSRSRSATKELALLPDDSLMCPPSFLAGLNPEVTAQDGQ
RFELRVQVKGDPDPQVNWFKDGKPLTSSSILEVKYKNGVSTVTIKEAFPE
DAGRYSCKASNSKGSVETSSQVTVAAMAKKATNGKVNGASPSVGSSNAGP
NVHTHIRSSVVKDGEPVVLECTIAGDSRFDVVWLHNEKEIKPSKDFNYST
AGNKHRLEIQEIFPEDSGTYTCEAFNDIGECYSTCTLEVEVPGEDIPGPR
FKSYPESLTVVKNASATFNVETMGTPKTISWMKDGKEVKEIPLKIKISSA
KSKFTLDVMDCSAADAGQYAIIVTSDKGESKSAFSLNVNV
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mRNA from alignment at scaffold401_size182380:167806..174658+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold401_size182380-snap-gene-0.21-mRNA-1 ID=maker-scaffold401_size182380-snap-gene-0.21-mRNA-1|Name=maker-scaffold401_size182380-snap-gene-0.21-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6853bp|location=Sequence derived from alignment at scaffold401_size182380:167806..174658+ (Tigriopus kingsejongensis)
AAAAAGGAGATTGGCTCGTCCGTCTGGAACCGAGTCAATGACTACAATCT
TCCTGATGTTGAATACACCGTCAGCGACCTCACCGAGGGTAGAGAGTACC
AATTCAGGATTCGAGCCGTCAACTCGACTGGCCAGAGTGAGCCTTGTCCC
GCCACCAATCCCGTGCGAGTGGGTGAATTGGACGATGGAGAATCGCCCGA
TTTCATCCGCTTCCTCCAAAATGCCGGAGCTGGCTTGGGCAAGAGTGTCA
CTCTGGAATGTGAGGCCACTGGCCGACCAGCCCCGAAAGCCAGGTGGATG
AAGAATGGTCGTGAGATCACGGAGCATCCCGGCCGAGTCATGATGGAGGA
GAAGAATGGCAAGTTTATTCTCACCATCACCGAGCTGTGGGATATTGACC
AGGGTGAATACACTTGTCAAGCCTACAATCATCACGGATATTCGAGCACC
CATTGCCGCATGAAGGTGGGAGCCCCACCCAAGATTGAGTACATACCGAG
TGAGTTGCATTACCCCGAGGGTGACAACTCCAAGATCAAGGTGAAATGGT
CGGGCGATTTGCCCTTCGACATCGAGGTCTACCGCGATGGCAAACTCATC
ACCGAGTCGAGCAAGTTCAAGATGAGCATCTTTGACGAGTTCCTCATCAT
CTTCATGCGCGAGATCTCCATTGACTTTGCCGGACGATACACCATCAAGG
TATCCAATGAGAGCGGCAGCGCCGAGGGATCCTTCAATATGTACATATCT
GGCCTACCTGGAGCTCCCATTGGACCACTCGAAACTACTGCGATAACCAG
CCACACGTGCAACCTCTCTTGGCAGCCACCGTCTCACGATGGTGGGTCCA
AGGTTACTCACTATGTGGTTGAGCGACGTGATTTCCAGAGCCAACAATGG
ATCACGATCTCCAGCTTCTGCAAGACTACCACCTTCGGCGTGCAGGGCCT
CACGGAGAATCAAGAGTACTACTTCCGAGTGCGGGCCGCCAATGCCAATG
GCAGCGGTCCTCCCTTGGAGGGCGTCAACCCGATCAAGGCCAAACCACCC
TATGACGTGCCTGGACCCCCAGGAATGCCCAACATCTTGGCTGTGGGTGG
GGATTTCGTCAATCTCTCTTGGGAGCGTCCCGAGAGCGACGGTGGCTCGA
GGATCAAGGGCTACTGGATAGAGAAGCGCGAAGCTGGCTACAATCTGTGG
CAGAAGGTGAACACCTACAACCACTCTGCCACCCAGATCAACATCACCAA
CCTCATCGAGGGCCGTCAGTACGAGTTCCGAGTGATGGCCGAGAATGACG
CCGGCATTGGAACGCCCTCAAGCAATTCGTCCTCCGTGGTGGCCAAGGAT
CCCGAAGATCCCAATCCCCCCGAGATCATTCAGCCCCTCAAGAATATCCA
TTGTGTGGAGGAGAAGCACGCCCGATTCGCATGCCGAGTTAATGGCTATC
CCAAGCCCAAGGTCACGTGGCTGAAGGGCGCTCGAGAGCTGTTTGACGGG
GCCAAGCACGAGATCATTGTCACTGGCAACCTCTACGAGCTAGTGGTCAA
GGGAGTCTACGGCGAGGATGAGGACACCTACACTGCGCGAGCTGTCAACA
CGGGTGGCACCAAATCCACCAAAGCCGATCTCAAGATCAAGACCGCTCCC
AAGCTCAACGTTCCTCCTCGATTCCGTGGCACAGCCGACTTTGATAAGGG
AGAGAATGGCTCCATCAAGATCCCGTTCACCGGTAATCCCAAGCCCAAAA
TCACTTGGACCAAGGACGGTGAGAAGATCGAATCTGGAGCTCGCTTCCAA
GTTGTCACCGAAGAACGCCACGCTCTCCTCACCATTGTGGATGTGTCCAA
GGCAGACACTGGCACCTACACCATCACGGCCGAGAACGAGCTGGGACAGG
ACTTTGCCATCATCCATGTCCAAGTGAGCGATCGCCCAGATCCACCCCGC
TTCCCCATCTGCGGCCAAATTGGCGCAGATTCCCTGGTGGTTGAATGGCA
ACCCCCAGCTTGGGACGGAGGATCCGCTATCACCAATTACGTGGTGGAGA
AACAAGAGCTGCCCATGACTGCCTGGACGAGATGCGGGCACACGAGGTTC
AACTTGTTCCCCGTCACCGACCTGACTCCGGCCCATGAGTATCGGTTCCG
AATCTTTGCCCAGAACGTGCACGGACAGAGTGCTTCGAGCGAGGAGACCT
CGATTGTGACCACTTTGGGTGTGGTTCAAAAGAAGAAGGCCAACACCAAA
TACGAGAGTAAGTCGAAAGAATTACACATTATTGTTTGGACTTCTTGTAA
CAGGTAGTTTCCAGTTGATCCAGCCACCGGGAAGAAGATCCGAGGTCAAA
AGTGCGAGGTCAAGGACTACGACCAGTTTGTCTTCGACATCTACTCCAAG
TATATCCCACAACCGGTTGATATCAAGACCCGGGACTCAGTCTATGATCA
GTATGACATCCTGGAGGAGATTGGCACTGGCGCCTTTGGCGTGGTTCATC
GCTGCCGTGAGATCCGCAGCGGCCACGTCTATGCGGCCAAGTTCATTCCC
ATCTCCCATGCCATGGAGAAGGCTCTAATCCGGAAGGAAATTGACATCAT
GAACCATTTGCACCACTGCAAGCTCATCAACCTCCACGACGCCTATGAAG
ACGAGGACGAGATGGTCCTCATCTTTGAATTGTAAGTACCTAAACTTAGA
GTTATTGCACTCTCAATTCAACAACTTGGGTTGAATGTCTAAAGAAATCA
AAAACCAATTGAACGGTTCTCGCTTAAGTCGCTTCTCACTGTGATTCTTG
TACTTCATCACTCGATGAACACGGTTTTCTTTGTCATGTCTAATGCAGCC
TCTAACCCAATCGCGCTTTCATTTGGATTCCCCACCTCGTTTTCAGTGTG
TCCGGCGAGAGTTTAATGTCCCGCATCTCTTCTAGTTTGTCGGGTGGTGA
GCTGTTTGAACAGATCACCTCCGAGGGCTATGTCATGTCCGAGGCTGAGG
TCATCAACTACATGCGTCAAATTTGTGAAGGTGTCAAACATATGCACGAG
CGTAACATCATTCACTTGGGTAAGGGGCAATTCGAAGACGCAAACAGCAG
CCTCGAAACTGGGTCGGGGTTCATTATGAAATTTCCTTTTAGACATCAAG
CCGGAGAACATCATGTGCCAGACCTCAAAGAGCACGAACATCAAGATCAT
CGACTTCGGCTTGGCCACCAAGCTCGATCCCAACGAGTTGGTCAAGATAT
CTACGGGCACAGCCGAGTTTGCGGCGCCCGAAATCGTAGAGAGGGAGCCC
GTGGGTTTCTTCACTGACATGTGGTCCATTGGCGTGTTGTCTTACGTCCT
CCTCTCGGGATTGTCGCCATTCGCAGGTGCCAATGACATCGACACCCTCA
AGAATGTCAAGAGCTGTGACTGGGAGTTCGACGACGAGGCCTTCAGGAAC
GTCAGTGAAGAGGGCCGAGACTTCATCCGAAAGCTGTTGATCAAGCACAA
GGAGAAGCGAATGACAGCTCATGAGTGCCTCCAGCACTCGTGGCTGACCG
GCGACCACTCCCACAGAACCTTGGAGATCGCTCGCCAACGATTCTTCGCC
ATTCGGGACAAGATTCGACAGAAGTACGCCAACTGGAACGATTACAAGCT
CCCCTTGGGACGCCTCTCGGAGTACAGCTCCCTGAGGAAGCTCCAGATGG
AGAAGTATCGCATCCAGGAAGTCCTGGTCGATCGCAAGAGTGCCGCCCCC
AGATTCGTCATCAAGCCCATCTCGACCTTCGCCATTGAGGGACACAGTGC
CCGCTTTACTTGCCGCATCATCTCCATGACCAATGTGACCGTGTCTTGGT
ACCACAACAACGTGGAGCTCCGACAGAGCGTCAAGTACATGAAGCGATAC
TCCGGCGATGACTACACCTTCATCATTAACCGGACCAAGCTCTCCGACCG
GGGCGAGTTCATCATCCGGGCCGAGAACAATTGCGGCGTCACGGAGGAGA
TCGTCTTCCTCAACGTCCAGGCCGCTCCCAAAGAGATCACCCGATACACC
CCTGAGCCTCTGCCCGTCAGGAAGAGGGAGCCCAGGACCATCAAGTTGTA
CAAGCAGGAGCGAACCTCGGCTCCAATGTTCACATTCCATCTCCGCCCAC
GTGTTATTCAAGGGGGTCAAACGTGTAAACTGCTGGCCTGTCTCACTGGC
AAACCTCATCCATCGGTAATACTAGTCTCGGGCTACTTTATTTGATATTG
AGAGTGGTGTACCCAAGGCCAAGTCGGGGAAGTTCTCTCGTTTCATCCTT
ACTTTCCTGGAAAGAAAAGGAGTTACTTGAGTTATTGATTTGTCACTTTA
TAATCGGCAAGTTTAGACATTTTCCACGGGACAAAGTAATGAGCAGAAGA
ATGTTAAGTAACTTGCTCGGGGACCATCGGAGCAAAACTCGGGGAAAAGC
AGTCTTGATGTGTGTGTGACCGCACCCTTCAACGGTGGCATCGTGTTCCC
ATTCAAGGAAAGTCATCCATGGGAAAACACAGGATCCATTGATGTTATTA
GCTAGTTAGCCTCTAGCCCCTTCCAATCCAATTACTTCACAACTTAAATT
TGTGGAGAACCTGATGGGACCCTTCCGTAAGATCTGAACGCCCCTGTAAA
GCAATTGAGGTAGCGAATTGCTGATCATATTTCATTTCATGGTTAGCGTG
GGTCCGTTACCATTGCATAACCCTAGCTCATGATTGGAGCAACAATATTC
ACACCGTTGTTCCTGATGCATTAGATCAAATGGATGAAGGGTGGGAAGGA
GTTGGATCCCTCCAAGTATCCGATCACTCACACCGATGGTGTCATCACCA
TTGAGATCATCAACGCTCAACCGGGAGATTCTGGCAAATACAAATGCATT
GCCACCAACGAAAAGGGTTCCGATGCATCTGATTGTGTTGTCATTGTCGA
AGGTCAGTTCATTCGATTTCCCCACTAGCTTTTGATCTGTTGTTAATGGG
ATTATTCTTGTTCCAGGTGCTAACATGAGCGATGAGCAGAGAAACATGTC
TGACCAGATACTATATTCAGGTATGTATTTGAGTGTCTTTGACCACTGCT
GACTTCATTCAGAAGCGCTTCACCGTGGATTTTTACCTCTCCGTTCCACA
GATCACAGTTATATCAGTCGACTCACGTGAGCCTATCCTAAAGAGCTCAA
AATCATCCCATTTCATCTTAAAAAACATATAGAATGCATTTTTTAGTATT
TCTAAGAAAACTACATTTTCACAACCAAAAAAATCAAAACGTTAGTAAGT
GGCACAGCCTTTGAAATGCGATGGAACATATTTGGGACAAAATGTCGAAT
ACATTATTTAATGAATGGTTTGGACACTCCTCATGGTGTAGCAATACTTG
ACAAGTCGGCTGAATTATTTCGAAAAATCGCCGACCGCTTCTAACAGCTT
TGGAAAGATCACAATTCATTGTTTATTGTAACCAGCTGCAATTGCATGGG
ACATTGCAACTCTTCTCATGACAAATGTTCCATGGAGGATCGAACGAATG
TTCCCAATTTCCAACCCATCACCTCGAGACCGTCTAATATGAGACCCTCT
ATCCTCTTTTAAATAAGTGTTCCACATTGGTTAGTCCATTGCTTCAATGC
GTGTTCCAAACTTCTTGCAGATAAGCGTTTCGTGGACCATTGCCAACGAG
TGGTCCATCCCCCAGCCAATACCGTCGATCCTGCCGATAAGAAGAAAAAG
AACAAAGCTTATCGGAGGAACGACTCCACCACCTCCTCCACCGGTTCCAG
GTCCAGGAGTGCCACCAAGGAACTGGCCCTCCTGCCCGACGATTCCCTCA
TGTGCCCTCCCAGCTTCCTCGCCGGCCTCAATCCCGAGGTGACTGCCCAA
GATGGGCAGCGTTTCGAGCTGAGGGTCCAGGTCAAGGGGGATCCTGATCC
TCAGGTCAACTGGTTCAAGGATGGGAAGCCGCTAACCTCCAGCTCCATCC
TCGAGGTCAAGTACAAGAATGGAGTGTCCACCGTCACCATCAAGGAGGCT
TTCCCCGAGGACGCCGGCCGCTACTCATGCAAAGCCTCCAACTCCAAGGG
CAGCGTGGAAACCTCTAGCCAAGTCACAGTGGCGGCCATGGCTAAAAAGG
CCACTAATGGCAAGGTTAATGGCGCTTCGCCCTCGGTAGGATCCTCCAAT
GCCGGCCCCAATGTCCACACCCACATTCGTTCGTCGGTGGTCAAGGACGG
CGAGCCGGTTGTCTTGGAGTGCACAATTGCCGGAGATTCCCGCTTTGACG
TGGTTTGGCTTCACAACGAGAAGGAGATCAAGCCCAGCAAGGACTTCAAC
TACAGTACCGCGGGCAACAAGCACCGCCTCGAGATCCAAGAGATCTTCCC
GGAGGATTCCGGCACCTACACGTGTGAAGCGTTCAACGACATCGGCGAAT
GCTATTCCACGTGCACACTCGAGGTCGAGGTTCCCGGCGAAGACATTCCC
GGACCTCGCTTCAAGAGCTACCCCGAGTCCCTAACCGTGGTCAAGAACGC
ATCGGCCACCTTCAACGTCGAGACCATGGGCACTCCCAAGACCATCTCGT
GGATGAAGGACGGGAAAGAGGTCAAGGAGATCCCCCTCAAGATCAAAATC
TCCTCGGCCAAATCCAAATTCACCCTCGACGTGATGGACTGCAGTGCGGC
CGATGCAGGCCAGTATGCTATAATTGTGACGAGTGACAAGGGAGAGAGCA
AATCCGCTTTCTCTCTGAATGTGAATGTGTAAGAATGTGAGCCAAGCATG
CAATGTACAGAAGTTTTTATACACATTCGCCAACAACAACAACAACAATG
TCG
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