maker-scaffold417_size177606-snap-gene-0.53-mRNA-1, maker-scaffold417_size177606-snap-gene-0.53-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold417_size177606-snap-gene-0.53-mRNA-1
Unique Namemaker-scaffold417_size177606-snap-gene-0.53-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold417_size177606supercontigscaffold417_size177606:43591..45853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
vacuolar protein sorting-associated protein 33amaker-scaffold417_size177606-snap-gene-0.53Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:226maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:226Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:227maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:227Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:228maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:228Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:229maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:229Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:230maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:230Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:231maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:exon:231Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:three_prime_utrmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cds-1976028Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cds-1976029Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cds-1976030Tigriopus kingsejongensisexon
maker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cdsmaker-scaffold417_size177606-snap-gene-0.53-mRNA-1:cds-1976031Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976032auto1976032Tigriopus kingsejongensispolypeptide
Tk07602Tk07602Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07602

>Tk07602 ID=Tk07602|Name=Tk07602|organism=Tigriopus kingsejongensis|type=polypeptide|length=608bp
LSFRSDSMIQFDLLRDLARRELLDHLDKYAGTKLLVWDDGLTAPLDLIAK
HSTLKERQVEKMVPLKPGRLPVDLGQYENVVFVTRPEVHLMEAVADNVKF
EEHSHGTRAEFHIMFVPKRSLLCEMRLKEKEVYGSFTFLDELSLFWFPLD
TDVISMENRQVFRDFHLNDDPTCLNQVAKGMLALQAVFGIIPRVIGKGHA
ARKVFEFMTQMRKELVVDEPQVISKIDTLIIIDRQIDLISPFLTQLTYEG
LIDEMFSINYNTVKLPAEKFHAPDSSDSEEPNPFGMKVIHLNSQDELYSE
LRDKNFNAIGPSLSKKARAVSAQMDERHDAKTVQELRLFVDKIPKMKVLR
QSLSIHTTIAELVKEATNEKRFLENLKVEQELINFQNADRPLEYLEDACC
HDEDIVSVLRLVCLQNVVNSGVKPKVLESYRRLILQTYGYKHLLTLQNLD
RLGLLSPQLQTSRNYPVLRKRLNLTRDDVDEQQPNDIAYVHSVYAPLSIR
LVQNLAHPGWKTIKDVLDLLPGPTLEEAQKTSSNVKRIKPPGEDHQSTTL
VLFVGGCTFAEIAALRYLSQREDSPTEYMVATTAIVNGDTFVKSLLTHVD
DNLAPRFV
back to top

mRNA from alignment at scaffold417_size177606:43591..45853-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold417_size177606-snap-gene-0.53-mRNA-1 ID=maker-scaffold417_size177606-snap-gene-0.53-mRNA-1|Name=maker-scaffold417_size177606-snap-gene-0.53-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2263bp|location=Sequence derived from alignment at scaffold417_size177606:43591..45853- (Tigriopus kingsejongensis)
CAAAAGCTCGGGCGTTTCAAACACCTCCCCAATGACAGTGGCGAGTGGAT
GAGCCACGTGAAGCCAAGTGGACCCATCCCGGTTGAGTTTCAGATCGGAC
AGCATGATTCAGTTTGACCTTCTGCGAGATTTGGCTCGGCGTGAGCTTTT
GGACCACCTGGATAAATATGCTGGAACCAAGGTGAGAGGTCATCCCATCT
TGGCTTCCATGGGGCTGGTCTGACGCTTGCACCTGGATTCCAGCTCCTCG
TGTGGGATGACGGACTCACGGCTCCTTTGGACTTGATCGCCAAGCACTCA
ACCCTGAAGGAGCGACAGGTGGAGAAGATGGTCCCTCTGAAGCCTGGCCG
GCTCCCCGTCGACCTGGGCCAATACGAGAACGTGGTATTTGTCACACGGC
CGGAGGTTCACCTCATGGAGGCTGTGGCCGACAATGTCAAGTTGTGAGTA
CAAGAGAGAGGTATCTAGAGCTGGTAGGGGCGTGGAGGTCACATCGGGCC
ATACATTTTGCAGCGAGGAACACTCCCACGGGACACGAGCCGAGTTTCAC
ATCATGTTTGTGCCCAAGCGGTCGCTCCTGTGCGAAATGAGGCTCAAGGA
GAAAGAGGTGTACGGATCTTTCACTTTCCTCGACGAACTCTCCCTCTTCT
GGTTCCCCTTGGACACCGACGTCATTTCAATGGAGAACAGGTGACCTACC
ATTCATGTCTGCTCCTGATCTCGCGGGGTTAACTTCTGGGTTTTCGGCTT
CAGACAGGTGTTCCGAGATTTTCATCTCAACGACGATCCCACTTGCCTCA
ATCAAGTCGCCAAGGGTATGCTGGCTCTCCAAGCCGTCTTCGGAATCATT
CCCAGGGTCATTGGCAAAGGCCATGCAGCTCGAAAAGTGTTTGAATTCAT
GACCCAAATGCGGAAAGAGCTGGTGGTGGACGAGCCTCAGGTTATCAGCA
AGATCGACACGCTCATCATCATTGACCGACAAGTAAGTTAGAGAGTCATG
AGACCGGACGAACCAACCAGACACCACGTTGTTTCCCTCCATAATTTAGA
TCGATTTGATCTCACCGTTCTTGACGCAACTCACCTACGAAGGCCTCATT
GACGAGATGTTCAGCATCAACTACAACACGGTCAAACTCCCGGCCGAAAA
ATTCCACGCCCCAGACTCGTCCGACAGCGAGGAGCCCAATCCTTTCGGCA
TGAAAGTCATTCACCTTAACTCGCAGGACGAGCTTTATAGCGAGCTGCGG
GACAAGAACTTCAATGCCATTGGTCCGAGCCTAAGTAAGAAGGCTCGGGC
CGTCTCGGCCCAGATGGATGAGAGGCACGATGCCAAGACTGTTCAAGAGC
TGCGACTCTTTGTGGACAAGATACCCAAAATGAAGGTAAAGCTAAACAAG
GGACTGATGGTCTGGGAGTCCAAATGGCTAAAAAGTGAGACTTGTTTTGG
TTGTTATAGGTCCTGAGGCAGTCTCTCTCCATCCATACCACCATAGCTGA
ACTGGTCAAGGAAGCCACCAATGAGAAGCGCTTTCTGGAAAACCTCAAGG
TTGAACAAGAGCTGATCAACTTCCAGAATGCCGACAGGCCTCTGGAGTAT
CTAGAAGACGCTTGCTGTCACGACGAGGATATCGTTTCGGTGCTCCGACT
GGTGTGCCTGCAGAATGTTGTCAACTCTGGGGTCAAGCCCAAAGTCCTCG
AATCCTATCGACGGCTAATTCTCCAAACCTACGGCTACAAGCATTTACTG
ACCCTCCAAAATCTGGATCGTTTGGGTTTACTGTCGCCACAGTTGCAGAC
CTCCAGGAACTATCCGGTTCTACGGAAGCGTCTCAATCTCACGCGGGATG
ACGTCGATGAGCAGCAACCCAATGATATCGCCTACGTCCACAGCGTGTAC
GCACCTTTGTCAATAAGGCTGGTTCAGAACTTGGCTCATCCGGGTTGGAA
AACAATCAAGGATGTTCTGGATCTCCTACCCGGTCCCACCTTGGAGGAAG
CCCAAAAGACGTCCTCGAATGTCAAGCGTATCAAACCTCCGGGCGAGGAC
CACCAATCCACGACTCTAGTTCTGTTCGTTGGCGGGTGCACCTTTGCCGA
GATCGCCGCCCTCCGCTATTTGTCACAGAGGGAGGATTCCCCCACCGAAT
ACATGGTGGCCACCACGGCCATCGTCAATGGAGACACCTTTGTCAAATCA
CTGCTCACTCACGTCGACGACAATTTAGCGCCCAGATTCGTCTAATAACG
TTTGAGGTTTTTT
back to top
Add to Basket