maker-scaffold430_size173499-snap-gene-0.37-mRNA-1, maker-scaffold430_size173499-snap-gene-0.37-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold430_size173499-snap-gene-0.37-mRNA-1
Unique Namemaker-scaffold430_size173499-snap-gene-0.37-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold430_size173499supercontigscaffold430_size173499:49435..51601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PREDICTED: uncharacterized protein LOC593001maker-scaffold430_size173499-snap-gene-0.37Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1157maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1157Tigriopus kingsejongensisexon
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1158maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1158Tigriopus kingsejongensisexon
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1159maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:exon:1159Tigriopus kingsejongensisexon
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:five_prime_utrmaker-scaffold430_size173499-snap-gene-0.37-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:cdsmaker-scaffold430_size173499-snap-gene-0.37-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold430_size173499-snap-gene-0.37-mRNA-1:cdsmaker-scaffold430_size173499-snap-gene-0.37-mRNA-1:cds-1978424Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1978425auto1978425Tigriopus kingsejongensispolypeptide
Tk06993Tk06993Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06993

>Tk06993 ID=Tk06993|Name=Tk06993|organism=Tigriopus kingsejongensis|type=polypeptide|length=477bp
MADGPAPLSPAPTPPSYLIDHLALVWALDVTEDPDVTWLLRDGRVHSDLP
PLAAACPGLRLILAEGQTHSEPVCLHLPQFSRSEVRTFLALLYTGQSPPA
SVRVMERVRALNGLLGGPSLSARSWPPASPGPADAQPPTGVDSFRPTNED
SVQALTIVASPEPATPRPAPPAVPRSRIPPGTVLDWRNAFRSAEAYPYKP
CPVCERVFLGRHALLAHLQAEHDASEACPLCPWTGDSGLELYSHLRAHYQ
RDQWAPESSAGARTSNGSGQYPCLEPGCRYQSHSLKVHREHMRRVHARKP
FLCAQCGQAFMTKASLTSHVDARHVGVVTRISCDLCSMVFKRKSSLNTHR
REQHEMSPQARQVQCPICQQSFRGRKNLRKHTQSIHARASGAPQCTYCPK
GFSKRNGLVVHERIHTGEKPYECTTCAIKFKRLHHLNFHLKSNAHAMNLD
KSQASNGDSMAGPRTKFEENGVVLAPP
back to top

mRNA from alignment at scaffold430_size173499:49435..51601+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold430_size173499-snap-gene-0.37-mRNA-1 ID=maker-scaffold430_size173499-snap-gene-0.37-mRNA-1|Name=maker-scaffold430_size173499-snap-gene-0.37-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2167bp|location=Sequence derived from alignment at scaffold430_size173499:49435..51601+ (Tigriopus kingsejongensis)
GCGGCAACAACTTCCGGGCCCTAGGCCCAGGACCTGGGCCTAGGCCTAGC
TCAGTACCCGTGTCCGGATCTGGCTGATGGACGAGCCGGAACGCTATTCG
GGGCTATCCCAGGCGGGTCCCACGGTCGAAACCAGGCGTGGCTGAGCCCG
GGCGTTCGGCCGACGATCCGGACTTGGAGCCCCTCGGATACCGCTCAGCC
GGCCGCTCTGGCGGGTGGCGGAGGCCATCGGAGGCCATTGTCGGCCGTGA
CTCGTCGAGGAAATCTCGAGCCAGGCCGACGGCCGGCCCACTGAGACCGA
TCCGGACCTGGCCCTGCCCGTCGGGGCGCGTGAGGCTCGGTGGAGGCCCT
CGGGGGGCAAGTGGCGCGTAGCCTCGCACCCCCGACCCATATGGCGGACG
GTCCAGCCCCGTTGAGCCCGGCGCCCACACCGCCCAGCTATCTGATCGAC
CACTTGGCGCTCGTCTGGGCGTTGGACGTGACTGAGGATCCCGACGTGAC
CTGGCTGCTCCGGGATGGGCGTGTTCATTCCGATCTTCCGCCCTTGGCCG
CCGCCTGCCCGGGACTGCGCCTGATCTTGGCTGAGGGTCAGACTCACTCG
GAGCCCGTGTGCCTCCACTTGCCCCAGTTCTCGCGCTCGGAAGTGCGGAC
CTTCTTGGCCCTCCTCTACACGGGCCAGAGCCCGCCCGCCTCAGTCCGGG
TCATGGAGCGGGTCCGGGCCCTCAACGGCCTCCTGGGTGGCCCCTCACTC
AGCGCCCGCTCGTGGCCGCCCGCGAGTCCCGGACCGGCTGACGCCCAGCC
ACCGACCGGGGTCGACAGCTTCCGGCCCACCAACGAGGACTCGGTTCAAG
CTCTGACCATAGTCGCTTCGCCCGAGCCGGCCACCCCTCGCCCGGCCCCG
CCGGCCGTGCCGCGGAGCCGAATTCCCCCGGGCACGGTCCTGGACTGGCG
TAATGCCTTTCGCTCGGCCGAGGCCTATCCCTATAAACCCTGTCCCGTGT
GTGAGCGCGTATTCTTGGGCCGCCACGCCCTTTTGGCCCACTTGCAGGCT
GAGCATGACGCGTCCGAAGCGTGCCCCCTGTGCCCGTGGACCGGCGATTC
GGGCCTTGAGCTCTATAGTCACCTGCGAGCTCACTATCAACGGGACCAGT
GGGCACCGGAGTCGTCCGCGGGGGCTCGGACGTCGAATGGGTCGGGCCAA
TACCCGTGCTTGGAACCCGGCTGCCGCTACCAAAGTCACTCGCTCAAAGT
GCACCGAGAGCACATGCGCCGCGTCCACGCGCGCAAACCGTTCTTGTGCG
CCCAATGTGGTCAGGCCTTCATGACCAAGGTGAGTTGGGGCCCGCCCCTA
ACCCGGACCCCACAACTTTTCCAGACGCCATTCTCGCCATTTAGGCCTCG
TTAACCAGCCATGTGGATGCTCGACACGTGGGCGTGGTGACTCGAATATC
CTGTGACCTCTGTTCTATGGTCTTCAAAAGAAAGTCGTCGCTCAATACCC
ATCGGCGCGAGCAACATGAAATGAGCCCCCAAGCACGCCAGGTCCAATGC
CCCATATGCCAACAATCATTCCGAGGGCGGAAGAATCTCAGGAAACATAC
CCAGTCCATACATGCCCGGGCAAGTGGGGCTCCCCAGGTTAGTGGTAATG
TTCTTGACATACGTTACCACTAGCGACTAATAGAGAGGCGACAGCGCTCA
AATAGCGAGGATCTCTAAATTAGAGCGGAATTATTTCTCCCCATAAAACC
CTCCCCCCCCCCTGTTATGTGGGGAGAAATACTTCACCACAAAATACATC
ACCCACCTGCACAGGGGCCAAGCTCAGCCCATTATGACGGAGCTGATCAG
GAACAAGCCCTGGTACGCTTACGAACATGCACTAACACTCATTTCTTTAC
TTCCCACAGTTCCAGTGCACATACTGCCCTAAAGGCTTTTCTAAACGAAA
TGGTCTGGTTGTCCACGAGAGAATCCACACTGGAGAAAAACCATACGAAT
GCACAACGTGTGCAATCAAGTTCAAACGATTGCATCACCTCAATTTCCAT
CTCAAATCCAACGCTCATGCCATGAACCTCGATAAATCCCAAGCTTCCAA
CGGCGATTCAATGGCAGGACCTAGGACAAAATTCGAAGAAAACGGGGTAG
TGCTGGCCCCGCCGTAG
back to top
Add to Basket