maker-scaffold433_size172344-snap-gene-0.8-mRNA-1, maker-scaffold433_size172344-snap-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold433_size172344-snap-gene-0.8-mRNA-1
Unique Namemaker-scaffold433_size172344-snap-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold433_size172344supercontigscaffold433_size172344:83716..89088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
multispecies: succinate dehydrogenase flavoprotein subunitmaker-scaffold433_size172344-snap-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:708maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:708Tigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:709maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:709Tigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:710maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:710Tigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:711maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:exon:711Tigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold433_size172344-snap-gene-0.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cdsmaker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cdsmaker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cds-1989657Tigriopus kingsejongensisexon
maker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cdsmaker-scaffold433_size172344-snap-gene-0.8-mRNA-1:cds-1989658Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1989659auto1989659Tigriopus kingsejongensispolypeptide
Tk05889Tk05889Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05889

>Tk05889 ID=Tk05889|Name=Tk05889|organism=Tigriopus kingsejongensis|type=polypeptide|length=1429bp
MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNAHEDHWEQHM
YDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFDNGSIYQRPF
GGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTVFSEWYALDL
VKNEDGAILGTTALCMETGEVCYFKAKATILATGGAGRIYASTTNAHINT
GDGVGMAIRAGVPMQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDG
ERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHIKLKLDHLG
KETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGGVPTQVSGQAI
KQTEDGTDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHL
GETLNKQAEAKPATEADIERSLERYNRWENSTDGEDPAVIRKDLQQCMQN
NFSVFREGKAMADGLEELKVIRERLKNAHLSDKSTEFNTQRIECLELENL
METAFATAVAANFRTESRGAHARFDFPDRDDEQWLCHSLYNPESESMTKR
GVNMEPIHREAFPPKARLPVVRDLIVDMTQFYDNYEKVKPFLVSDGNVPP
ARENLQSPDERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAY
RWLIDSRDTATDERLSDLDDAFSVFRCHGIMNCVLQLINAYRFRGHQSAN
LDPLGLWERDTVAELDPSFHTLTEDDLNETFNVGSYAIGQETMVLRDLYK
SLKQTYCGSIGAEYMHMTNTEQKRWIQQRLESVSGQPSFDKEEKQAFLEE
LTAAEGLERYLGAKFPGAKRFSLEGGDALIPMTKEIIRHAGGQGMREVVV
GMAHRGRLNMLVNVLGKKPQDLFDEFAGKHSDDSWGTGDVKYHQGFSADF
ATPDIAKMVQAPIFHVNSDDPEAVAFVARLALDYRNTFKRDVVIDLVCYR
RHGHNEADEPNATQPLMYQKIKKHPTPRKLYADVLMERGEFGIDTATQLV
NEYRDALDHGEVVVKEWRPMALHSVDWSPYLGHDWNIEWDNKIDIERLKE
LGSKLCQYPDSHKLQSRVNKLYNDRTAMVNGEKQVDWGMAETLAYATLVD
DGKRIRISGQDSGRGTFFHRHSVLHNQSDASTYVPLANIHDKQGPFQVFD
SVLSEEAVLAFEYGYATAEPSGLTLWEAQFGDFANGAQVVIDQFISSGEQ
KWARLCGLTMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQ
VYHMIRRQVVRPMRRPLIVMSPKSLLRHPLCTSSMEDLAEGTFQPAIAEI
DDLAPENVKRVVFCSGKVYFDLLDQRRKNEQDDVAIVRIEQLYPFPYEDV
RAAIAQYTNVVDYVWCQEEPQNQGAWYSSQHNFRAAIPVGADIQYAGRPA
SASPAVGYMSVHLKQQKALVDDALTLLKN
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mRNA from alignment at scaffold433_size172344:83716..89088+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold433_size172344-snap-gene-0.8-mRNA-1 ID=maker-scaffold433_size172344-snap-gene-0.8-mRNA-1|Name=maker-scaffold433_size172344-snap-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5373bp|location=Sequence derived from alignment at scaffold433_size172344:83716..89088+ (Tigriopus kingsejongensis)
TAATCGGCGCTGGTGGTGCTGGTATGCGTGCCGCGCTACAAATTTCTGAG
CAAGGCCTATCTTGTGCGTTGCTTTCTAAAGTTTTCCCAACTCGTTCTCA
TACTGTATCTGCGCAAGGTGGTATCACCGTTGCTCTTGGTAATGCGCATG
AAGATCACTGGGAACAACACATGTACGATACGGTTAAAGGTTCCGATTAT
ATCGGCGACCAAGATGCTATCGAGTACATGTGTAAAAATGGCCCTGAGTC
GGTTATCGAATTAGAAAAAATGGGTCTTCCATTTTCTCGCTTTGATAACG
GCAGTATTTACCAACGTCCGTTTGGTGGCCAATCTAAGAATTTTGGTGGT
GAGCAAGCGGCTCGTACTGCAGCGGCAGCTGACCGTACTGGTCACGCACT
GCTTCATACGCTTTACCAACAAAACATTAAACACAAAACGACGGTTTTCT
CTGAGTGGTATGCACTGGATCTTGTTAAAAACGAAGATGGTGCAATCTTA
GGTACTACCGCGCTTTGTATGGAAACGGGCGAGGTTTGCTACTTCAAAGC
GAAGGCAACAATCCTTGCTACTGGTGGTGCTGGTCGTATCTACGCATCAA
CAACGAATGCACACATTAACACTGGTGACGGTGTTGGTATGGCGATTCGT
GCAGGCGTTCCAATGCAAGACATCGAAATGTGGCAGTTCCACCCAACGGG
TATCGCTGGCGCAGGTGTTTTGGTAACAGAAGGTTGTCGTGGTGAAGGTG
GTTACCTTCTCAATAAAGACGGCGAGCGCTTCATGGAACGTTATGCTCCG
AATGCTAAAGATTTAGCAGGTCGTGATGTGGTAGCTCGTTCAATGATGGT
TGAGATTCGTGAAGGTCGTGGTTGCGATGGCCCATGGGGTCCACACATCA
AGCTGAAACTTGATCACTTAGGTAAAGAGACGCTTGAATCTCGTCTGCCG
GGTGTATGTGAGCTTTCTCGTACGTTTGCTCACGTTGATCCAGTTAAAGA
ACCAATTCCTGTAATCCCAACGTGTCACTACATGATGGGTGGTGTTCCAA
CTCAGGTTTCTGGTCAAGCAATTAAACAAACTGAAGACGGTACAGACGTT
GAAATTCAAGGTCTATTCGCTTGTGGCGAAATCGCTTCAGTATCTGTACA
TGGTGCAAACCGTCTAGGTGGCAACTCGCTACTTGATTTGGTTGTGTTCG
GTCGTGCAACAGGTCTTCACCTTGGTGAGACTTTGAATAAGCAAGCTGAA
GCAAAACCTGCAACTGAAGCCGACATTGAACGTTCACTAGAGCGCTACAA
TCGTTGGGAAAACAGTACTGACGGTGAAGACCCTGCGGTAATTCGTAAAG
ATCTTCAGCAATGTATGCAGAACAACTTCTCTGTATTCCGTGAAGGTAAA
GCGATGGCTGATGGCTTAGAAGAGCTTAAAGTGATTCGTGAGCGTCTTAA
GAATGCACACCTTTCAGATAAGTCGACAGAGTTCAACACGCAACGTATTG
AGTGTTTAGAGCTTGAAAACTTGATGGAAACGGCATTCGCAACTGCGGTT
GCAGCAAACTTCCGTACAGAGAGTCGTGGAGCGCATGCTCGTTTTGACTT
CCCAGACCGTGATGATGAGCAATGGCTATGCCACTCACTTTACAACCCAG
AATCAGAAAGTATGACTAAGCGTGGCGTGAACATGGAACCTATCCATCGT
GAAGCATTCCCGCCGAAAGCACGTACGTACTAAGGAGATATGACCATGAA
ACTGAATTTCTCTTTATACCGTTACAACCCAGATGTGGACCAGAAGCCTT
ACATGAAAGAGTACACCCTAGAGGTGGAAGAAGGCTCTGACATGATGCTT
TTGGATGCGCTTATTCTTTTGAAAGAGCAAGATCCAACGATTTCATTCCG
TCGTTCATGCCGTGAAGGTGTATGTGGTTCTGATGGCTTGAACATGAATG
GTAAAAATGGATTGGCGTGTATTACACCTCTGTCTGCTCTTACTGGCCAA
GATAAAATCGTAATTCGCCCACTTCCAGGTTTGCCTGTGGTGCGTGATTT
AATCGTAGACATGACTCAGTTCTACGATAACTACGAAAAAGTTAAGCCGT
TCTTAGTGTCTGATGGCAATGTGCCACCGGCTCGTGAAAACCTACAAAGC
CCTGATGAGCGTGCTCATTTAGATGGTTTGTATGAATGTATCATGTGTGC
ATGTTGTACGACTTCGTGCCCATCATTCTGGTGGAATCCAGATAAGTTCA
TCGGACCAGCTGGCCTGCTTGCAGCATACCGTTGGCTAATAGATAGCCGA
GATACGGCGACAGACGAACGTCTGTCCGATCTTGATGATGCATTTAGCGT
TTTTCGTTGCCATGGCATCATGAATTGTGTAAGTGTTTGTCCTAAGGGAT
TAAATCCGACGAAAGCGATTGGTCATATTAAGACCATGCTAATAAATCGT
TCGGTTTAAGTTATATAAAAATTGCCGCCCTAGAAGTTTTGGGGCGGCCT
TTTAATAGCTCGGCATAGACCGCAGCACACGTGAAAACTACTGGTTAAGG
GAAAATATGCACAACGGCGTGATGAAGGCATGGCTCGAGTCTTCACACTT
GGCTGGCGCCAATGCAACGTACGTAGAAGAACTCTACGAACTGTATCTAA
GTGACCCCGACTCGGTAAGTGACGAATGGAGAAGCGTATTTGAAGAATTG
CCTGTGCAAGCTTCAGAAACGGTGGAACAACCACACTCTCGCGTTCGTGA
ATACTTCCGTCGACTCGCTCAAGAAACAAAGCATTACAGTGTCCAAGTTA
GTGATCCTGATGTCGATGCGAAACAAGTAAAGGTTCTGCAACTTATTAAT
GCCTATCGATTCCGAGGGCATCAATCAGCAAATCTAGACCCCCTAGGTTT
ATGGGAAAGAGATACAGTCGCTGAACTGGATCCTTCTTTCCACACTCTTA
CCGAAGATGACCTCAATGAGACGTTTAACGTCGGCTCTTACGCCATTGGC
CAAGAGACGATGGTGCTTCGAGATTTGTACAAATCTTTAAAGCAAACTTA
TTGTGGTTCGATTGGTGCTGAATACATGCACATGACTAACACAGAGCAAA
AGCGTTGGATCCAACAACGTTTAGAGTCTGTTTCTGGTCAACCCTCTTTC
GATAAAGAAGAAAAGCAAGCTTTCCTAGAAGAGCTAACTGCTGCTGAAGG
TCTTGAGCGCTATCTTGGTGCTAAATTCCCAGGCGCAAAACGCTTCTCGT
TGGAAGGTGGTGATGCGTTGATCCCAATGACGAAGGAAATTATTCGTCAT
GCAGGTGGACAAGGCATGCGTGAAGTTGTTGTTGGTATGGCTCACCGTGG
TCGTCTAAACATGCTGGTCAATGTGCTTGGTAAAAAGCCACAAGACCTGT
TTGACGAGTTTGCGGGCAAGCACAGCGATGACTCGTGGGGCACTGGTGAT
GTGAAATACCACCAAGGTTTCTCTGCGGATTTCGCAACACCAGGTGGCAA
CGTTCACTTAGCACTTGCATTTAACCCATCTCACTTAGAAATCGTAAACC
CGGTAGTTATCGGTTCTGTACGTGCTCGCCAAGATCGTCTAGACGATAAA
GATGGCAGCCGCGTACTTCCAATTACTATCCATGGTGATTCAGCTATCGC
TGGCCAGGGTGTAGTACAAGAGACGTTCAACATGTCTCAAGCTCGTGGTT
TCTGTGTTGGTGGTACGGTTCGTATTGTTGTAAATAACCAAGTTGGTTTT
ACAACGTCTAACCCTCGCGATACTCGTTCTACGATGTACTGTACAGATAT
CGCGAAGATGGTTCAGGCTCCGATTTTCCACGTTAACTCTGATGATCCAG
AAGCTGTCGCTTTCGTAGCGCGTCTTGCATTAGATTACCGTAATACGTTT
AAGCGTGATGTTGTTATTGATTTGGTTTGTTACCGTCGCCACGGTCACAA
TGAAGCCGATGAGCCGAATGCAACGCAGCCTTTGATGTACCAAAAAATCA
AGAAGCATCCAACGCCACGTAAGCTTTATGCTGACGTGCTAATGGAACGC
GGTGAGTTTGGTATTGATACGGCAACTCAACTCGTTAACGAATATCGTGA
TGCACTTGATCACGGTGAAGTTGTGGTTAAAGAGTGGCGCCCAATGGCAC
TTCACTCAGTGGACTGGTCACCTTACCTAGGTCACGACTGGAACATCGAA
TGGGACAACAAGATTGATATCGAGCGCCTGAAAGAGCTTGGTAGCAAACT
TTGCCAGTACCCAGACAGCCATAAGCTGCAAAGCCGAGTAAACAAACTGT
ACAACGATCGTACTGCCATGGTGAATGGTGAGAAACAAGTCGATTGGGGT
ATGGCCGAGACTCTGGCTTACGCAACACTTGTTGATGACGGTAAGCGTAT
TCGTATCTCAGGCCAAGATTCAGGTCGTGGTACGTTCTTCCACCGTCACT
CAGTACTGCACAATCAATCAGATGCAAGCACGTATGTTCCTCTTGCGAAC
ATTCATGATAAACAAGGGCCATTCCAAGTATTTGACTCTGTGTTATCTGA
AGAAGCGGTACTCGCATTTGAGTATGGTTATGCAACGGCAGAACCAAGCG
GTCTAACCCTTTGGGAAGCGCAATTTGGTGATTTCGCAAACGGTGCACAA
GTTGTAATCGATCAATTCATTTCGTCAGGTGAGCAAAAGTGGGCACGTTT
ATGTGGTCTAACTATGCTGCTTCCTCACGGCTATGAAGGCCAAGGCCCAG
AGCACTCATCTGCACGTCTTGAACGTTACCTTCAATTATGTGCTGAACAA
AACATGCAGGTTGTTGTTCCTTCAACACCGGCACAGGTTTATCACATGAT
TCGCCGTCAGGTTGTTCGACCAATGCGTCGTCCACTGATCGTAATGTCAC
CTAAGTCATTGCTTCGTCACCCTCTATGTACGTCTTCTATGGAAGATTTA
GCAGAAGGTACGTTCCAACCAGCTATCGCAGAAATTGATGATCTGGCTCC
TGAGAACGTAAAACGCGTCGTGTTCTGTTCAGGTAAGGTTTACTTTGACC
TGCTTGATCAAAGACGTAAGAACGAGCAAGACGATGTCGCTATTGTACGT
ATTGAGCAACTTTACCCGTTCCCTTACGAGGACGTGAGAGCTGCAATCGC
ACAATACACAAATGTAGTCGATTACGTTTGGTGTCAAGAAGAGCCACAAA
ACCAAGGTGCTTGGTACAGTAGCCAACATAATTTCCGAGCTGCTATCCCA
GTGGGTGCTGATATTCAATATGCAGGTCGTCCTGCATCAGCATCACCAGC
TGTTGGCTATATGTCGGTACACTTGAAACAACAAAAAGCGTTAGTTGACG
ACGCTTTGACCCTACTTAAGAAC
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