maker-scaffold43_size480169-snap-gene-3.28-mRNA-1, maker-scaffold43_size480169-snap-gene-3.28-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold43_size480169-snap-gene-3.28-mRNA-1
Unique Namemaker-scaffold43_size480169-snap-gene-3.28-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold43_size480169supercontigscaffold43_size480169:350027..351692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
dead-box helicase dbp80-likemaker-scaffold43_size480169-snap-gene-3.28Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:449maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:449Tigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:450maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:450Tigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:451maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:451Tigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:452maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:exon:452Tigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:five_prime_utrmaker-scaffold43_size480169-snap-gene-3.28-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cdsmaker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cdsmaker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cds-2017526Tigriopus kingsejongensisexon
maker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cdsmaker-scaffold43_size480169-snap-gene-3.28-mRNA-1:cds-2017527Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2017528auto2017528Tigriopus kingsejongensispolypeptide
Tk12734Tk12734Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12734

>Tk12734 ID=Tk12734|Name=Tk12734|organism=Tigriopus kingsejongensis|type=polypeptide|length=477bp
LLPSNCEMASEGKKDLDWAGAADAQEKSLIKQVGGLDVNGKPKEEESEEP
ASVADQSLFQKIIRKGLIESSNDLEIQRRDPKSPLYSVKSFEALNLKPQL
LKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML
SRVDQSKNYPQVLCLSPTYELALQTGEVASKMSQFATDLTIRYAVRGEEI
PRGSSITDHIIIGTPGKVLDWALKFRFFDLSKIRVFVLDEADVMIATQGH
QDQSIRIQKQLSKECQMMLFSATYDTTVMDFAENIVRNPVIIRLRREEET
VFNIGQYWVQCETPELKYEAIANIYGVITVGQAIIFCHTRKTASWLADKL
TQDGHTCALLSGELSVGDRINVLDRFRDGKEKILITTNVLSRGIDVEQVT
IVINYDLPVDHTNGKADCETYLHRIGRTGRFGKSGLAINLVDCEQSMDVL
RDIESHFGKPIVKLDTENVTEIENLQK
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mRNA from alignment at scaffold43_size480169:350027..351692+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold43_size480169-snap-gene-3.28-mRNA-1 ID=maker-scaffold43_size480169-snap-gene-3.28-mRNA-1|Name=maker-scaffold43_size480169-snap-gene-3.28-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1666bp|location=Sequence derived from alignment at scaffold43_size480169:350027..351692+ (Tigriopus kingsejongensis)
AGATCGTCGTCCTTGCTCCCCTCGAATTGCGAAATGGCCTCCGAAGGAAA
GAAAGATTTGGATTGGGCGGGAGCAGCCGATGCTCAAGAGAAATCCCTGA
TCAAGCAAGTGGGCGGACTTGATGTGAATGGCAAGCCCAAAGAGGAGGAG
AGCGAAGAGCCGGCGTCCGTGGCCGACCAAAGCCTGTTCCAGAAGATTAT
CCGGAAGGGTCTCATCGAGTCCAGTAACGATCTTGAGATTCAGCGAAGGG
ACCCCAAATCGCCCCTCTATTCCGTGAAGTCCTTCGAAGCCCTCAATTTG
AAGCCGCAGCTCCTCAAAGGCGTCTATGCCATGGGATTCAACGCCCCCAG
CAAGATCCAAGAAACCGCTCTTCCCACACTCTTGGCCGATCCCCCGCAAA
ACATGATTGCCCAATCACAGTCTGGAACCGGCAAGACAGCCGCCTTCGTT
CTTGCCATGCTGAGCCGGGTGGATCAAAGCAAGAATTACCCACAGGTAAC
TCGGCGAGGGAAAAGCACCTCCCGGGAGAGGGAAGACGGCTTGAGCCTGA
TTCTTCTTCGCAATGCAGGTCTTGTGCTTGTCGCCCACGTACGAATTGGC
CCTCCAAACTGGGGAGGTGGCATCGAAGATGTCTCAGTTTGCCACGGATC
TGACCATTCGCTATGCCGTCAGAGGCGAGGAAATCCCCAGAGGGAGCAGT
ATCACTGATCACATCATCATCGGAACGCCGGGGAAGGTAAGGAACGACCC
ATTGGATTAATCAGTCACGCCTTGGTTGACACATCTCTCGTCCTCATAGG
TGCTGGATTGGGCTCTCAAATTTAGATTTTTCGACCTATCGAAGATCCGA
GTCTTTGTCTTGGATGAAGCTGATGTGATGATTGCTACGCAAGGTCACCA
AGACCAGAGCATTCGCATCCAAAAACAACTTTCGAAGGAATGCCAAATGA
TGCTATTCTCCGCCACCTACGATACCACGGTGATGGACTTTGCGGAGAAT
ATAGTGCGCAATCCAGTCGTGAGTACACATACATCGTCGAGGAAAATATA
CATATTCCAGGGCATTGAGGATCGTGATATCCCCCCTTTAGATCATCCGG
TTGCGACGGGAAGAAGAAACCGTGTTCAATATTGGCCAGTATTGGGTCCA
GTGCGAGACACCCGAGCTCAAATACGAGGCTATTGCCAACATCTATGGCG
TCATCACTGTAGGGCAAGCAATTATATTTTGCCACACCCGCAAGACGGCC
TCTTGGCTGGCTGACAAGCTAACACAGGACGGGCACACTTGTGCGTTGCT
CTCCGGCGAGCTGAGCGTGGGGGACAGGATCAATGTCCTTGATCGCTTCA
GAGACGGAAAGGAAAAAATCCTCATCACCACCAACGTGCTCTCGCGGGGA
ATTGATGTAGAGCAGGTCACGATAGTTATCAACTACGATCTGCCCGTGGA
CCACACCAACGGCAAGGCTGACTGCGAGACCTATCTACATCGGATTGGGC
GGACGGGTCGCTTCGGGAAATCCGGATTGGCCATCAACTTGGTGGATTGC
GAGCAGTCCATGGACGTGCTCCGGGACATCGAGTCCCACTTTGGCAAGCC
CATTGTCAAATTGGACACCGAGAACGTGACGGAAATAGAAAATTTGCAAA
AGTGAAGGAACCCGAT
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