maker-scaffold462_size163801-snap-gene-0.41-mRNA-1, maker-scaffold462_size163801-snap-gene-0.41-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold462_size163801-snap-gene-0.41-mRNA-1
Unique Name	maker-scaffold462_size163801-snap-gene-0.41-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold462_size163801	supercontig	scaffold462_size163801:34541..41233 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
topoisomerase 1b	maker-scaffold462_size163801-snap-gene-0.41	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1972604	auto1972604	Tigriopus kingsejongensis	polypeptide
Tk04567	Tk04567	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold462_size163801:34541..41233-

protein sequence of Tk04567

>Tk04567 ID=Tk04567|Name=Tk04567|organism=Tigriopus kingsejongensis|type=polypeptide|length=920bp
MGENGVETTLMNGNNGSTDHGDADVKNGFHEGKSEHRSSSSSKHKSKDKE
RRKETEEERRIRKDKEKKDRDDRHKKEGRREETEEERKIRKEKERREREE
RYKKEGKRPETEEERRIRKEKERKDREDRSKKEGRREETDEERKIRKEKE
KKDRDDRPKRDGKRDESEEERKIRKERERKEREDRHRSKGKETEEERRER
KERERKERKEKEHKDREGTESQEDEDTNGQSEDPMDDDSQDSQASMKEEP
MDGEDSEEDKPLARNSKKRKVNDDEDEFQPDDDDDEDVPIAKRKRVKKEE
PRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKK
EENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEG
KRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEII
RDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTID
GHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPK
PPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKY
EKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKD
EDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEK
RVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNAS
ITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMT
NLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLM
EQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYN
KTQREKFRWAIEMAGPEYQF

mRNA from alignment at scaffold462_size163801:34541..41233-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold462_size163801-snap-gene-0.41-mRNA-1 ID=maker-scaffold462_size163801-snap-gene-0.41-mRNA-1|Name=maker-scaffold462_size163801-snap-gene-0.41-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6693bp|location=Sequence derived from alignment at scaffold462_size163801:34541..41233- (Tigriopus kingsejongensis)
AGAAAATCGAGCTGTGAGCGTCTAAGTGCCATTGCGAACAGGAACTTAGG
CTCTCGCGAGGAGCGAAGGGAGGTGATCGCTTCTGCCATCTTTGCCACTC
GGTGAGCTCGAAGAAATAGAGTCAAACCCTCGGGAAAATGGGAGAAAATG
GTGTGGAGACCACTCTGATGAACGGGAATAATGTAAGTAGAGCTCGTTCA
GCCCAGCCCCACGCTGCTAATGGCCGTGCGCGTGGAGGCCACGCTCCAGG
CCACGCGCACGGCCACGCGCCAGGCCACGCACTGACCCTCACTCAAGCCC
TGCTCTTTTTTCCACCTTCCAGGGCAGCACGGATCACGGGGATGCGGGTA
AGTCGAGGCCAAGTGCGATAAGGGAAGCCGAGCTCGACCTCGTCCCCGGC
TAGCCGTGCACGGGCTAGCAGGGGGCCCCGGCCCACGGCACTAGGTGGCG
TAAGAGCTTCATGGCTGACTTGGGAACACCCAGGGTTGGATCGCTGCCAT
GTGGCGACGGTGGGTGAATGGAGATGCCCTAAACCGGGCTATGTCCCATA
AGCGAGGGATACTTGTAAAAAAAATCCGTTCCGAAACGGATCAAAACTGG
CAAGCATGTCACCATTCATCCAGCGACCTGACCCATGTTGGCCTTTCAGA
CGTGAAGAACGGCTTCCACGAGGGCAAATCCGAACACCGGAGTAGTTCCT
CGTCCAAGCACAAGAGCAAGGACAAGGAGAGGCGAAAGGAAACCGAGGAA
GAGCGGCGAATTCGCAAGGACAAGGAGAAGAAGGATCGGGACGATCGCCA
TAAAAAAGAAGGCAGACGAGAGGAAACCGAAGAAGAGAGGAAAATCCGGA
AGGAAAAGGAAAGACGTGAGCGTGAGGAACGATACAAGAAGGAAGGGAAA
CGTCCCGAAACTGAGGAAGAGCGCCGCATCCGCAAGGAAAAGGAACGCAA
GGACCGAGAAGACCGCTCCAAGAAGGAAGGCCGCAGGGAGGAGACCGACG
AAGAACGCAAAATCCGGAAGGAAAAAGAGAAAAAGGATCGTGATGACCGG
CCCAAACGCGATGGGAAACGAGATGAGTCTGAGGAAGAGCGCAAGATCCG
GAAAGAAAGAGAACGCAAGGAGCGTGAAGAGTAAGTAGTGGCCACAGATC
GGACCGATAAGACCGTTTGTGTGGAGTCATTTATTTGATCACTCATCAAT
AGTAATGTACAGGCACAATTTATGTCATTTGTCAGGCCGGTGCACTCCTA
TTTACAATCTGACGGGTTAGATTGGCTAGAGGGGTGCTGCTATTGCCAGC
TTAATAGCAACTGGCTTGTCCTTGGCGCGCATCGTACGATCCGGAAAGAA
CTTGGGAGATTAATGAGTATGTTGTTGACGTTTTCTAGCCGCCATCGTTC
TAAAGGCAAAGAAACCGAAGAGGAAAGGCGAGAGCGCAAGGAAAGGGAAC
GGAAAGAGCGGAAAGAGAAGGAGCATAAAGATCGTGAAGGGACCGAGTCC
CAGGAAGATGAGGACACAAACGGGCAATCCGAAGATCCCATGGACGACGA
CTCCCAGGATTCGCAGGCCTCCATGAAAGAAGAGCCCATGGATGGCGAGG
ACAGTGAAGAGGATAAGCCTCTGGTGAGCACTCGAAATGAAAATGACCGA
TTCATCACTGATAACCCTTAATGGCCAATACTATTTATCAACATGGCGCA
AAAACACGCCGGAGCTTGACCACGAACATCATTGCCAAGTAATTATGGTC
TCAATGTTTAGAATATGGTCAGCCAGGTATGTTGGCTTGAATCAATAGAA
ATCATGCCAATTTGACCGAAGAAAGACTTAGTGGCTGTCGTCGAAAGTAT
GTGCCGAATGCTGGCATTATGTACCTAACGCCATGCCCATGCTCTTCCCG
CCTTATGTGCTGGCGATGGTCTGGAATGCCCAATTAGCGGTACAATCTAA
GGCATTTTAATCCTGTAGGTCGGTGCCACGGTAACGATGAGACCTGCTTC
AGCCACGCCGAGCACTTGTCTCAGAACGTTACTCTGTTAGTGAGCCATCA
TTAGTATAATGTATTCATAATCGGGTTGGTCTTTTAGCAAGTACCTTAGT
GAACAGAAATCAATCGGCTCCATTCTTCTCGTGTTTTTAGGCCAGAAATT
CCAAGAAGCGCAAAGTGAATGATGATGAGGACGAATTTCAACCAGATGAT
GATGATGACGAAGATGTCCCTATTGCCAAGAGGAAGCGTGTCAAGAAGGA
AGAGCCCAGGTACAAAGAGGAGGACGATGACTACCAAGAGGATGTCAAAC
CCGCCAAGTCCAAGAAAAAGGCCAAGCCAGAGAAGAAGACTCCATCCAAA
CCAGCCTCTTCCTCGGCCAGTTCAAATCCGAGAGGTGGGAAAAAGGTGAA
GAAGGAAGAAAACCAAGAAGTGTGGAAATGGTGGGAGGAGACGACCCACA
AGAAGGACGATGGCACCAAGTGGCAGTTCCTAGAACACAAGGGTCCCCTT
TTCGCGCCAGACTACGAGCCTCTACCTAGTCATGTTCACTTCTATTACGA
AGGCAAGCGAATGCGATTGTCCCAAGACACTGAGGAGGTGGCTACCTTCT
ACGGTCGCATGTTGGATCACGACTACACTACCAAAGAAGTGTTCAATCGA
AACTACATGAAAGATTGGAGGAAGGTTATGAACGAAAAGGAGAAGGAGAT
CATTCGAGACATCAGCAAATGTGATTTCAAGGAGATCGGCGTGCATTTCA
AGAAAGTCTCGGAAGAGCGAAAGGGTCGGTCCAAGGATGATAGAAAGGCC
GAGAAAGAGCGTAATGAGGCTATTCAGAAGGAATACGGATTCTGTACCAT
TGACGGACACGTGGAAAAAATTGGTAACTTCAGAATTGAGCCTCCGAGCT
TGTTCCGAGGTCGTGGGGAGCATCCCAAGCAAGGGATGTTGAAGAAACGT
GTCTCGCCAGAGGACGTGATCATTAATTGCTCCAAAAATTCGGACATCCC
AAAACCTCCCGAGGGTCGCAAATGGAAAAAGGTCCAGCATGATAATACGG
TAAGCCTAAAATTATCGATGGCTTGTTAGGAAGGAAATTGTTTTTCGCGT
TCGCCAATGTACTGAAAATTCGTTGTGTTGGGCGATTGGAGCAAGAACTC
GGAATGATTGCCCTGCTACCTCATGTTGTAAGAGGGCTATTGGATATCGT
ACATTGTCAGAATACATGGCCACGATTGTTCCACCGTTTTAGAATATATT
TGACCAGAGCCATTCACGGTACTTGCCAAGGTTGAGTTACTATCTGCAAT
GCCATGAACCATGTCCTCGCAAACAAATTTGGAGAAAGACCTAACCGTTG
GGACGTAAATGCTCACGTTTTGCAGATTCCCCCACTTGCATTTGACCAAT
ACGAGTCGGCGTTGTCAAAACTCGTTAGATTGTGCGATGTGTTTGGGAAC
CATACGAAAGGAAACGTTTGTTGTGACATAATTCCCTATCCTTTCTCCCT
TAGGTGACCTGGTTGGCGTGCTGGACAGAAAACATTCAAAACCAAATCAA
GTACGTCATGCTAAATCCCTCGTCCAAGCTCAAGGGCGAGAAGGACATGG
CTAAATATGAAAAAGCTAGAGAACTGAAAAAGCTTATTCACAAGATTCGC
GACGATTACACAGCTGATTTCAAGTCCAAAGAGATGCGCGTCCGACAACG
GTCAGTGGCTCTATACTTCATTGACAAATTGGCGTTGAGAGCGGGCAACG
AGAAAGACGAAGATCAAGCCGATACCGTGGGCTGTTGCTCGCTCAGAGTT
GAGCACATCACGCTTCATCCCGAGAAAGATGGTAAGAATTATAACGATGC
ACGATATTCTAGGGACAATTATAATGCAAATCGGCATACAAGTCGTGTAT
GTTAGGCCCAGAAAGTGCTCGTGCTCTAAAAGGGTTCAGATTATGCTGCA
TTTTGTTGGTGCATTGTGAAAATACCCTACGTAAATACTCGAATGATCTC
TTCGAGACTGGCAATCGTGTTTTGCATTCGATAGTCAGTCAATCTGAGGT
CCACGGTCCATCCTTCAGCCTCATCCCCTTCGATCTCTTCCTATGTATAT
CTTGCTCATTGCCCAGCAATGTCCCCAACACATTTGCTATGCCATTCACC
GACGACCTCCTCCTACACTTAATCGAATTGGGCGAAAATAAGATATAGAT
CAGAAGCGATCACCATAGACTTTTGAAGTACCCATCTCTCACTCCCTGCC
CTCTTTGAAAATGTGATACCGGTACAATGTCCGACTTTAATCTACGAACG
GAGCGGCGTTCCTTCCATTTCCCGTTCTCAAATCATATGAATCTTCTTTT
TGTAGTAACGCTGGTAGAGACGCTACGATCTGTATTGGCTGGAAATATGT
GCATGCGGACAATACGTACTTTTAGATTAGACCTATCAGCTCGGACCTGT
CCTGGCAATACAATGCGATATCCCTGAAGCTCTCTTTCATCCGTATCGAG
CTACAAGATGAAGTTTTTCTCACGCTTCTCCTTCTCCTTGGACCCCAAGG
ATAGCTTGTGCACGACGCCATTCTGCTTATGGCGAGAGTAGAGTTGATGT
TGAAAGTTTTGGGTACCTGCTTCAAGGAGTATATCTTGCCGGAAAGCGTA
ACCTGAAGGGTGTGCAATGCTGTTTTTTCGAATATTCCTCGTATTTGACT
TGCTTTCAAAAAGTGTCTCTGGTTCTTATTTTGGTCCCAGATCTGTCACA
ATCTTCAAGTTTTTCCGTTCTTTCCCTTGAATGAAGAATTTCCAGTCAAC
CAAGAGGGAGACACACACAGGCCTTTGGAAAAGGCCTCAACCAGGGCTCT
TAATTCGCTCTCTAGTGCTCCTGTTAGTGCAATGAGCCCTTAAATGTCTG
TCCAAAGTGAGAACCCTGCGTTGGTGTTAGCTTGAAAATCCGTTTCCATT
TCCGATGATTTGATGATTTCCTGCTGCAATCCAGCCGTCGAACGTCTTCG
AATGTTACAAAACATCGCTCAGTGGTCCTCGAAAATTATAATCCGTCCTT
GATCGGAGCTTACCCAAGACGAAGAAGGAGCAGCCCACTTATCGCCCATC
TTTCTTTCAGGGCAAGAATACGTGGTGGAATTTGATTTCCTCGGAAAGGA
TTCCATCCGTTACAACAACTGTGTCCCCGTTGAGAAACGCGTCTTCAAGA
ACGTTCAATTATTTATGGAGAACAAAAAGGCAGGCGACGACCTGTTCGAT
CGTCTGAACACTTCGATTCTCAATGAGTACTTGAACACGCTCATGCCTGG
GCTCACGGCCAAAGTGTTCCGTACTTACAATGCCTCGATCACTCTCCAAG
AACAGCTGAACCAACTCACCGAGGAAGATGACAATGTCCCTGCCAAGGTA
ATCAATCCTAGGGTATACTTTTCGCGTAGCTCGAGTGCGTGAGTACTTGA
AAGTCTGGAAATTGGCCATTGAAATTGAGTGGGCAGTGCATGATGCCATA
TTCACACCTGTGATGGGTCTGGTAACGAGCTCTAATGAGTGGGTCTCAAT
GAATGCCAATGCTTGGGGTGCAAACGCAAGGTGTTAAGTTATTATGTGCG
GTGTGGCGTGAATGAATCATCGACACGCAACCATCTCGAGGCAAATTATC
ACGATCAAAGCCACTATTTGCCCTCCCAGATCGTCTCAAGTATGACCCAT
TTAGATGGCTCTGGATAATTGGGGCTGTCGGAAATGGAATGAAACGTAGC
CTTTCTCGGATGGAAGAGCTCGTTGCCCGACCATCCTGCGATTTCGTTCG
AGTTGTGTTGGCTTCTAATGTGATTCTTTTGTCGTAGATGTTGTCCTACA
ACCGAGCCAATCGCGCCGTAGCTGTTCTCTGCAACCATCAACGTGCCGTT
CCCAAGACTCACGAGAAGTCCATGACCAACCTTCAGACCAAGATTGAAGG
CAAGAAGGATGCCGTGAACAAGGCTGAAAAGGAATTCAAGGCCGCCAAGA
AATCGCACAAGAATGGCGGATCCGCCACAAGCAAGATCAACATGGACAAG
AAGAAGAAGGCCTTGGAGCGACTGATGGAGCAGTTGAACAAACTGGAGAC
CCAAGCCGTGGATAAAGAGGAGAACAAGAGCATTGCCTTGGGTACCTCGA
AGCTCAACTATCTGGATCCCAGAATCTCCGTGGCTTGGTGCAAGAAATTC
GATGTTCCCATCGAAAAGGTGTACAATAAGACGCAACGCGAAAAGTTCCG
TTGGGCCATCGAAATGGCCGGCCCAGAGTACCAGTTCTAGGCGTCAGTCC
GAGACTCCAATCTCCACCTGGGGTCAGTATTTTCGTAGCGATATTGATCA
GCGCTTGAAGCCCCGACATGATGTACGATAATATGGTTGGGACAATGGGT
AGTAGTGTTATTGGGGTGTAAAAAACGCACTATGGATGGGCAATTTCCCC
TCCCTCTGTTGTGTGAGTAATCTATTTTCTCGTAATTTACACCCCCGATC
CTGATGAAATTGTTGAATTAAAGATGATACGTGCACCTCAGTCCGCATCC
ATTGTAAATCTCCCCAGGAGTCGCCGAGATCATGTCGCATCATTTTGGGT
TGGCACTTGGAACTGCCATTTGTGGCTCTGGTGAGATGCTTATGAAAGAA
GCACGTGACGCATCTCCACCAGTGGCGAGATGGAGTGGTGGAC

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