maker-scaffold478_size161223-snap-gene-0.27-mRNA-1, maker-scaffold478_size161223-snap-gene-0.27-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold478_size161223-snap-gene-0.27-mRNA-1
Unique Namemaker-scaffold478_size161223-snap-gene-0.27-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold478_size161223supercontigscaffold478_size161223:24383..27836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
neutral sphingomyelinasemaker-scaffold478_size161223-snap-gene-0.27Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:788maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:788Tigriopus kingsejongensisexon
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:789maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:789Tigriopus kingsejongensisexon
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:790maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:exon:790Tigriopus kingsejongensisexon
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:three_prime_utrmaker-scaffold478_size161223-snap-gene-0.27-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:cdsmaker-scaffold478_size161223-snap-gene-0.27-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold478_size161223-snap-gene-0.27-mRNA-1:cdsmaker-scaffold478_size161223-snap-gene-0.27-mRNA-1:cds-1967610Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1967611auto1967611Tigriopus kingsejongensispolypeptide
Tk02255Tk02255Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02255

>Tk02255 ID=Tk02255|Name=Tk02255|organism=Tigriopus kingsejongensis|type=polypeptide|length=406bp
MYTENTFVLQENGTEAKLVLTVAEETAEKRPCVQGHRVTSAMESYPEIDV
SDRRQLLDDEGSARSRSRVRALCHSWRWCVGIWIILACIILGHALSIYYI
YFRCNHSNCVGVKVLTLNTWGMPASLGSQFKTERMKAIAQELSRGDHDIY
LLQELWMNPDWNTLHAALPSGYYMTGFRDLALGTCDGRVGPEFCSGLTIV
SKYPFLEKEFNSYTYHGDPLKSWIDAEWLARKGVGRVRIEPLPGMVVDVF
VTHTAADPDPSHGYDNRYYRIRQVQELMDTYVTHSEADVVLLGGDFNAGP
NQTAGEPYAMVKDHMQNCIEEVFYKLLEWLNPQYATYGNQKNTFSNHYTP
IIYDYIFHHTRDPNVVRVWTNLFELPFFKFFLKKDHEISFSDHEAVEATI
YMWKKW
back to top

mRNA from alignment at scaffold478_size161223:24383..27836-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold478_size161223-snap-gene-0.27-mRNA-1 ID=maker-scaffold478_size161223-snap-gene-0.27-mRNA-1|Name=maker-scaffold478_size161223-snap-gene-0.27-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3454bp|location=Sequence derived from alignment at scaffold478_size161223:24383..27836- (Tigriopus kingsejongensis)
ATGTACACTGAGAATACGTACGTCTTTGAGCGAGCACGGCGGTGAAGGCC
AGAGCCAGAAAGATGATCTTAGTGACCATTGTACTGAAGGTGTGTGGAGT
ATTTCGATTTTGAGTGCCACAAAGTCCTCTCTTGCCTCGTGCTGAGCTCA
AGCAAGACTGACCACAATCGGGGCCTGAACGCATCAAGTGCTCATCTTCC
TGGTCAGGACACTTGGTCCACCTTGAAAATGTAACAATGGTGCCGTTGGT
TGCCAACCCAGGCATACCGTAGCAGTGGTAGCTGCATCGGTAACTATCCG
CTCAAGACGAGATCTGGTCGATAATGTACGTGAACCGAGCGTTATTCCCA
ACCCTCTAGCGTTCAACAGTGCTCCTCCATTGCCATATTATCCACTTTGT
CCAGAATACGGACGTTGCTTGGGCTACATATGCATACCTGCATGGAGTGG
GGAATAGTTATTGCATATACTCTCCGGCCGTCAAGGAGGCTTCATGGACA
AGTTTTTGGGATGGAGTAAACAGTGAAGTTAACCTACCAGACTTGCATAA
CGTTCTCATGCCACCCTTTGAAAGTAGGGAAGCATTCAAACGTTGGTTGA
GTTATACAAGATACCACCGCCATTGCTGTGAGCCAAAATTCGAAATCAAA
TGCTTTCCTTGAAACATAATCAAATAATAGAGTCCTGATTCCGTCTACAT
TTTTATCAGGGCAAGGCTCGGTCGTGGGACAACGAAGTTCACACGCGTAC
GTAGAGATAATGCGTAGAACAAAGCTTCCTTGGGTGACTCACCTTCAAAC
CCAGAGTTAGAATTGGCCACATTTTTGTGATAGGCCAAATAATGGCTCAG
ATCAAAGGCGTCCATTGAAATCACTAGCAGTCAAAACTAAAGAACAATGG
TATGGTCGGGTGTTACAGCTTGAATGGTCCATTGGAGCATTTAAACATGA
TCGTCAGTTTCATTCACCATAAAGTAATAGTCAATCGCCAGCCATATTAG
CAGCCCTGTAGTCGTCAGGGAGTCGCGGGGTAGGGGTTAAGTCTCAATGT
TTCATATAACTCCAGAACAGCGACTTAAGCATGAGCAACTTTTACTTTTC
GATCAGATTACATCAAAAATAACAGAATTAACTCTCAACTGTTCCACCCA
AGTATCAAATCAAGCTTCAGTCCCAAACCAAAGTCTCCAACGATCAAATT
TTTGGGTCACTTGGATTCCAATCAGGGTGGCGACCGACGGCTCAGAAGAA
CGTCAATGGCCTCGCCCGAGACGTCTGAGCTTCAACTTAAATGAAAGTCA
TTTCTTGATTGGTGTATGTACTGGTGATACCATCAATCCCACGTTGACCT
GGTCGATGAGTCAGGACTGTATGGGTGATGTCACACACATATTTCCGCCC
ATGACGCAATTTGCATCCCATCGTCAATTCTCACCCTGCCCCTTCGCTTA
TTGACAGATTCGTACTTCAAGAAAATGGTACAGAGGCCAAGTTGGTCTTG
ACCGTTGCCGAGGAGACCGCAGAGAAACGCCCCTGTGTCCAGGGCCACCG
AGTCACGAGTGCCATGGAGAGCTATCCCGAGATCGACGTGTCCGACCGAC
GCCAATTGCTGGATGACGAGGGGTCAGCCCGTAGCCGTTCACGGGTGCGG
GCCTTGTGCCACAGCTGGCGATGGTGTGTGGGCATCTGGATCATCTTGGC
CTGCATCATCTTGGGTCACGCCCTCTCCATCTACTACATCTACTTCCGTT
GCAACCACAGCAACTGCGTGGGGGTCAAAGTGCTCACCTTGAACACTTGG
GGCATGCCCGCCTCCTTGGGCTCGCAGTTCAAGACGGAGCGGATGAAGGC
CATTGCCCAGGAGCTGAGCAGGGGCGATCACGACATCTATCTGCTCCAGG
AGCTCTGGATGAACCCTGACTGGAACACCCTCCACGCAGCCCTGCCCTCC
GGGTACTACATGACTGGCTTTCGCGACCTCGCTTTGGGGACCTGCGACGG
ACGGGTGGGTCCGGAATTCTGCTCCGGCCTCACCATTGTGTCCAAGTATC
CCTTCTTGGAGAAGGAGTTCAACTCCTACACTTACCACGGCGACCCCCTC
AAGTCCTGGATCGATGCCGAGTGGCTGGCCCGTAAGGGCGTGGGCCGCGT
CCGGATTGAACCCTTGCCCGGCATGGTTGTGGACGTGTTTGTGACCCACA
CGGCGGCTGATCCCGACCCCAGTCATGGTTACGACAACCGATACTACCGA
ATCCGTCAAGTCCAGGAGCTGATGGACACCTACGTGACCCACTCCGAGGC
TGACGTGGTCCTTTTGGGCGGCGACTTCAATGCTGGACCCAACCAAACGG
CGGGTGAGTGCCATTGGCCAAGTTAAACACTATTGCACAACGAGCCAATC
CCGTGCAGTTTGGGCTGGGAAGGAGCACAACCTGACCTGTCTGACGAAAG
CCAAGTTGCATCCAGGCTTGAATCCGCCGATGCCAGCAGTCTGAGCTGGC
TCTGTTTAAATCGGGAGGAATTATGTAGCATGCGGCATAATGGATATCGA
CTCAGTAGATTCCCGGCCTTCGTTACGTTGTCAGTGATACATTCTGTTCT
GTTTTTCTCCATGTTACAACACAATCCAGCGGGTTACCGGACTTAATCAC
GATTTCACGTATTGGCATGGTTTTCAGAACAACTATTGACTTCAAATAGT
GGCTGAAAGTATCATAAGCAATATAAGTAATCGATGCTCAAATTGGGGAG
ACATATTTTAAAGTTGCCCGAAATTGCTGCCACAACTGTTTTTGTTGCAT
TAGCTTTTCCTGCGCCTCACTAGGCATAAATGTCTATTGATGGTTTTAAA
ATTGTGCCCTGTGTTTATTTTTTTGTGCCATGAATACATTGCTTGAACTG
TTTCCAGGTGAACCCTATGCCATGGTGAAGGACCACATGCAAAATTGCAT
TGAGGAAGTATTCTACAAGTTGCTCGAGTGGCTGAACCCACAGTATGCCA
CTTACGGCAATCAGAAGAACACCTTTTCCAACCACTACACACCCATCATC
TACGATTACATTTTTCATCACACCCGGGATCCCAATGTGGTGAGGGTTTG
GACCAACCTCTTCGAATTGCCCTTCTTCAAGTTCTTCCTCAAGAAGGACC
ACGAGATCAGTTTCTCCGACCACGAGGCGGTTGAGGCCACCATTTACATG
TGGAAGAAGTGGTAAAGGTCGCTTTCATTTGTCAGGACCCCACTTTGGCC
CAATCTATGAGATGCTAAATAGCTTTCTCAGGCTTCTTGTACAACATTCC
CCTACGGATAGTTCATCTCTTTCTCGTAACTCGTTTACTCATTTCACGCT
GACGCACTACTTCTATATGATTTTTCTTATGCTCGATCGAAATGTGATAT
TATCTACAGTATACTTGGTAGTACCGTAGAGGAAATACAAATATATCGAA
TCAA
back to top
Add to Basket