maker-scaffold487_size158652-snap-gene-0.38-mRNA-1, maker-scaffold487_size158652-snap-gene-0.38-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold487_size158652-snap-gene-0.38-mRNA-1
Unique Namemaker-scaffold487_size158652-snap-gene-0.38-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold487_size158652supercontigscaffold487_size158652:7679..11038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
chromatin-remodeling complex atpase chain iswimaker-scaffold487_size158652-snap-gene-0.38Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:352maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:352Tigriopus kingsejongensisexon
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:353maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:353Tigriopus kingsejongensisexon
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:354maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:exon:354Tigriopus kingsejongensisexon
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:three_prime_utrmaker-scaffold487_size158652-snap-gene-0.38-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:cdsmaker-scaffold487_size158652-snap-gene-0.38-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold487_size158652-snap-gene-0.38-mRNA-1:cdsmaker-scaffold487_size158652-snap-gene-0.38-mRNA-1:cds-1957458Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957459auto1957459Tigriopus kingsejongensispolypeptide
Tk00174Tk00174Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00174

>Tk00174 ID=Tk00174|Name=Tk00174|organism=Tigriopus kingsejongensis|type=polypeptide|length=1032bp
MSSSSSSSSSATSSACPTPSGGAGAGAAPPAETVKPTDKRFEYLLKQTEL
FSHFMGDSKKPKSPLKVKPVKPAVPAAGAVAAAVSPGASAASAASAKDHR
HRMTEQEEDEELLTDLNKSKKNTVHFDESPHYIKHGKLRDYQVRGLNWMI
SLHDNGISGILADEMGLGKTLQTISLLGYMKHFRNVNGPHMVLVPKSTLA
NWMNEFKKWCPTLRAVCLIGDQATRNAFIRDTMMPGGWDVIVTSYEMLIR
EKSVFKKFNWKYMVIDEAHRIKNEESKLSLIVREIKTSNRLLLTGTPLQN
NLHELWALLNFLLPDVFSSSSDFDEWFNTNNCLGDDTLVKRLHGVLKPFL
LRRLKSDVEKSLLPKKEVNIYVGLSKMQRDWYTKILMKDIDIVNGAGKVE
KMRLQNILMQLRKCVNHPYLFDGAEPGPPFTTDVHIIENSGKMLILDKFL
PKLQEQGSRVLIFTQMTRILDILEDYCWFRNYKYCRIDGQTAHEDRNRQI
EEFNAENSEKFIFMLSTRAGGLGINLYTADIVVLYDSDWNPQMDLQAMDR
AHRIGQKKQVKVFRLVTENTVDEKIVERAAVKLKLDRMIIQQGRLADQKS
NLGKDEMLNIIRHGAKHVFSSKDSEITDTDIDKILEVGERKTEEGNQKLA
ELGESSLRSFTLDTKPENSVYNFEGEDFREKQRDDIGMNWIAPPKRERKA
NYAVDAYFREALRVGAAEPKAHKAPRPPKQPIVQDFQFFPPRLFELLDQE
IYHYRKVVGYKVPLNSDLGSDAKKVQKEEQRKIDDSDELTEDEQEEKEEL
LTEGFTNWSKRDFNQFIRLHEKYGREDISAIAKEVEGKTPEEVIAYSKVF
WERCSELQDIDRIMAQIEKGEAKIQRRSLIRKALDAKVARYRAPFHQLRI
AYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRNAPQFRFDW
FIKSRTAMELQRRCNTLITLIERENHEIEEREKAEKKKNKRAGGDKDKGA
EGKQTPGKNQKRKNDEADTNSTSSSSKKKTKK
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mRNA from alignment at scaffold487_size158652:7679..11038-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold487_size158652-snap-gene-0.38-mRNA-1 ID=maker-scaffold487_size158652-snap-gene-0.38-mRNA-1|Name=maker-scaffold487_size158652-snap-gene-0.38-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3360bp|location=Sequence derived from alignment at scaffold487_size158652:7679..11038- (Tigriopus kingsejongensis)
ATGTCGTCCTCGTCGTCGTCCTCGTCCTCGGCCACCTCCTCGGCCTGTCC
CACGCCTTCGGGCGGGGCCGGAGCCGGAGCGGCCCCACCGGCGGAGACCG
TCAAGCCCACGGACAAGCGCTTCGAGTATCTGCTCAAGCAGACCGAGCTG
TTCTCGCATTTCATGGGCGACAGTAAGAAGCCCAAGTCCCCCCTCAAGGT
CAAGCCCGTCAAGCCGGCCGTGCCCGCCGCGGGAGCCGTGGCGGCGGCCG
TGTCGCCGGGCGCCAGCGCGGCCAGCGCGGCCAGCGCCAAGGACCACCGC
CACCGCATGACCGAGCAGGAGGAGGACGAGGAGCTGCTCACCGACCTCAA
CAAGTCCAAGAAGAACACTGTGCACTTTGACGAGTCGCCCCACTACATCA
AGCACGGCAAGCTCCGGGACTACCAGGTCCGCGGGCTCAACTGGATGATT
TCGCTCCACGACAATGGGATCAGCGGCATCCTGGCCGACGAGATGGGCCT
GGGCAAGACGCTCCAGACCATCTCGCTCCTGGGCTACATGAAGCACTTCC
GCAACGTGAACGGACCCCACATGGTGCTCGTGCCCAAGAGCACCCTGGCC
AATTGGATGAACGAGTTCAAGAAGTGGTGTCCCACCCTCCGGGCCGTCTG
CCTCATCGGCGATCAGGCCACTCGCAACGCCTTCATTCGGGACACGATGA
TGCCGGGCGGCTGGGACGTGATTGTCACCTCCTACGAGATGCTCATCCGC
GAGAAGTCCGTCTTCAAGAAGTTCAACTGGAAGTACATGGTCATCGACGA
GGCTCACCGCATCAAGAACGAGGAGTCCAAGCTCTCGCTCATCGTTCGCG
AGATCAAGACCTCCAACCGCCTGCTCCTCACCGGCACCCCGCTCCAGAAC
AACCTGCACGAACTCTGGGCCCTGCTCAACTTCCTCCTGCCCGACGTCTT
CAGCTCCTCCTCGGACTTTGACGAGTGGTTCAACACCAACAACTGCCTCG
GGGACGACACGCTGGTCAAGCGCCTCCACGGCGTGCTCAAGCCCTTCCTC
CTCCGTCGCTTGAAGTCGGACGTGGAGAAGTCGCTCCTTCCCAAAAAGGA
GGTCAACATCTACGTGGGGTTGAGCAAGATGCAGCGGGACTGGTACACCA
AGATCCTCATGAAGGACATTGACATCGTCAACGGGGCCGGCAAGGTCGAG
AAAATGCGCCTCCAGAACATTCTCATGCAGCTGCGCAAGTGCGTCAACCA
TCCGTACCTCTTCGACGGAGCCGAGCCCGGCCCACCCTTCACCACCGACG
TGCACATCATCGAGAACTCGGGCAAGATGCTCATCCTGGACAAGTTTCTG
CCCAAGCTCCAGGAGCAGGGCTCGCGTGTGCTCATTTTCACGCAGATGAC
CCGCATCCTGGACATCCTCGAGGACTACTGTTGGTTCCGCAACTACAAGT
ACTGCCGCATTGACGGACAGACGGCTCACGAGGACCGGAATCGACAGATC
GAGGAGTTCAACGCCGAAAACTCGGAAAAGTTCATCTTCATGCTGTCGAC
GCGGGCCGGTGGTCTCGGCATCAACTTGTACACGGCCGACATTGTGGTCC
TCTACGACTCGGACTGGAATCCTCAGGTAAGGGCGCATGTCCGAATGGGT
TTGTAACGTAGGGTGAGCAGGGTCATCAACCCATCCCTCTTGTCTCCCCC
TCTCTAGATGGATTTGCAAGCCATGGACCGAGCCCATCGGATCGGTCAGA
AGAAGCAAGTGAAGGTGTTCCGCCTCGTCACCGAGAACACCGTCGACGAA
AAGATCGTCGAACGGGCCGCCGTCAAGCTCAAACTGGATCGCATGATCAT
CCAGCAGGGGCGACTGGCGGATCAGAAGTCGAACCTCGGCAAGGACGAGA
TGCTCAACATCATTCGACACGGAGCCAAGCACGTGTTCTCCTCCAAGGAC
TCGGAGATCACCGACACAGACATCGACAAGATCCTGGAGGTGGGCGAGAG
GAAGACCGAGGAGGGCAATCAGAAATTGGCCGAGCTGGGCGAGTCCTCCC
TGCGCTCCTTCACGCTCGACACCAAGCCCGAGAACTCTGTCTACAACTTT
GAGGGCGAGGATTTCCGCGAGAAGCAGCGCGACGACATCGGCATGAACTG
GATTGCCCCGCCCAAGCGCGAGCGGAAGGCCAATTACGCCGTGGACGCCT
ACTTCCGGGAGGCCCTCCGCGTGGGGGCCGCCGAGCCCAAGGCCCACAAG
GCTCCCCGCCCGCCCAAGCAGCCGATTGTACAAGACTTTCAGTTCTTTCC
CCCCAGGCTATTTGAGCTTCTGGATCAGGAGATCTACCACTACCGCAAGG
TGGTGGGCTACAAGGTGCCCCTCAACTCCGACTTGGGCTCGGATGCCAAG
AAAGTCCAGAAGGAGGAGCAAAGAAAAATCGACGACTCGGACGAGCTCAC
CGAGGACGAGCAGGAGGAGAAGGAGGAGCTCCTAACGGAGGTGAGTTGCG
CGACACTATGAAAAGCTCTCTCTTTTGGGGGACAAATTTGAACATGCCTC
ATCTAATCCATTCTCATTTGCACCAGGGATTCACCAATTGGAGCAAGCGC
GACTTCAACCAGTTCATCCGACTCCACGAGAAGTATGGGCGCGAGGATAT
CAGTGCCATTGCCAAAGAGGTCGAGGGCAAGACGCCCGAGGAGGTCATAG
CCTACAGCAAGGTGTTCTGGGAGCGATGCTCGGAGCTGCAGGACATCGAT
CGAATCATGGCCCAGATTGAGAAAGGCGAGGCCAAAATCCAGAGGCGCTC
GCTCATCCGAAAGGCCCTCGACGCCAAGGTCGCCCGCTATCGGGCTCCGT
TCCATCAGCTCCGCATAGCCTATGGCACCAACAAAGGCAAGAACTACACG
GAAGAGGAGGATCGCTTCCTGGTGTGCATGCTCCACAAGTTGGGCTTCGA
CAAGGAGAACGTCTACGAGGAGCTCAGGGCGGCCGTGCGCAATGCGCCTC
AATTCCGATTCGACTGGTTCATCAAATCCCGGACGGCCATGGAACTCCAG
CGACGCTGCAACACGCTCATCACTCTGATTGAGCGAGAAAACCACGAAAT
CGAGGAGAGGGAGAAGGCCGAGAAGAAGAAGAACAAGCGAGCCGGTGGCG
ACAAGGACAAGGGTGCCGAGGGCAAGCAGACTCCGGGCAAGAATCAGAAG
CGGAAGAACGACGAGGCGGACACGAACTCCACCTCGTCGAGCTCGAAGAA
GAAGACCAAAAAGTGATCGCCCCAAGCCGGACTCACTCACTCCTCTCTCT
TTCCATATTCCATGTTCTCGGGCGACTGTAAAGTATTACTGTGAATAGTG
CGACCCCATA
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