maker-scaffold49_size462716-snap-gene-1.17-mRNA-1, maker-scaffold49_size462716-snap-gene-1.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold49_size462716-snap-gene-1.17-mRNA-1
Unique Namemaker-scaffold49_size462716-snap-gene-1.17-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold49_size462716supercontigscaffold49_size462716:25167..28703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GH20777maker-scaffold49_size462716-snap-gene-1.17Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:621maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:621Tigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:622maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:622Tigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:623maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:623Tigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:624maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:exon:624Tigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:five_prime_utrmaker-scaffold49_size462716-snap-gene-1.17-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cdsmaker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cdsmaker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cds-1967963Tigriopus kingsejongensisexon
maker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cdsmaker-scaffold49_size462716-snap-gene-1.17-mRNA-1:cds-1967964Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1967965auto1967965Tigriopus kingsejongensispolypeptide
Tk03611Tk03611Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03611

>Tk03611 ID=Tk03611|Name=Tk03611|organism=Tigriopus kingsejongensis|type=polypeptide|length=414bp
LKAMSMILQLLFLSGLTLGAQIVPLLQELDTYEIKGVHEVFPLNPMFHGI
EDRGEENVPQIDDPLDVDTDLHEVEDDLSDVFTDPLLVPPPVAPKPMETR
GTNQPPLVPKEIGSNPTLSAMSKKMPPQAGPGFGSDTMSGWYQDGDCLVK
DLDENDADDPHLDEAFNPFAGTRFSMERIIGGEETDVNEFPWVVSLQTSQ
GQHFCGGSIISNQIILTAAHCLTWGVKSVQIAFGEHHLHQDSESESFTRR
ATKLIIHDQHVERNPDFDIGLIKLDTPISFEKHIKSIRIPSQRTRSLTGG
MAIASGWGNTEWLGGEGSSTLQKVSIGVISNEVCQEKYKDDTISERMMCA
GVSKGGKDSCQGDSGGPLIMKGRLLGYVQVGIVSWGRGCGFAQYPGVYTR
ISKFSDWIRTNAEK
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mRNA from alignment at scaffold49_size462716:25167..28703+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold49_size462716-snap-gene-1.17-mRNA-1 ID=maker-scaffold49_size462716-snap-gene-1.17-mRNA-1|Name=maker-scaffold49_size462716-snap-gene-1.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3537bp|location=Sequence derived from alignment at scaffold49_size462716:25167..28703+ (Tigriopus kingsejongensis)
CTTGAAGGCCATGAGCATGATACTTCAACTACTTTTTCTCAGTGGCCTCA
CTTTGGGGGCCCAGATTGTACCTTTGCTGCAAGAGCTGGATACCTATGAA
ATCAAAGGTGTCCACGAGGTGTTCCCACTGAATCCGATGTTCCATGGGAT
CGAGGATCGGGGTGAGGAAAATGTGCCCCAAATCGATGATCCCTTGGACG
TGGACACGGATTTGCATGAGGTGGAAGATGACCTCTCGGACGTCTTCACC
GATCCACTCCTAGTTCCACCCCCAGTGGCCCCGAAACCCATGGAAACCCG
GGGAACAAATCAACCTCCATTGGTGCCCAAGGAAATTGGATCCAACCCAA
CACTATCAGCGATGTCCAAAAAGATGCCCCCTCAGGCTGGACCGGGTTTT
GGATCAGACACAATGAGCGGTTGGTACCAGGATGGGGATTGCTTGGTCAA
GGATCTGGATGAGAACGACGCAGATGATCCCCACCTGGACGAGGCCTTTA
ATCCCTTCGCTGGAACCCGATTTTCCATGGAGCGAATCATTGGAGGAGAG
GAAACCGATGTCAACGAGTTTCCTTGGGTCGTGTCCCTCCAAACCTCTCA
AGGCCAGCACTTTTGTGGCGGATCCATTATATCCAACCAGGTAAGTTCCA
AACCCAGTGCGTTTTCACCGAAATTGAAATAGTTCGCAACGCCAGAATTG
TTCAAAATTGTACAATTCTGTTAAGTGTATAGAGCGTTCGTCGAGCCTTA
AAAAGGTCAGTAATTCTTCGTTCATTCACAAGCTATATTATGCAACCCAC
TATCTGTGAAACACTTTGGTATATTGCTCATTAAAGCATTAAGAGATATT
TCTTCTAAAAACATAAATTTCGATTTCAAACGCCAATCACGTGTTGTACT
CACTTAGTTATTTACCAAATAAAAGTGCGTGCGAGAAAATGTCCCAATAT
TTTAACGACAAACGGGTGAGTAACCTCCGGCCTTAATACTAAAACTTGAC
ACAGCTTGAAACAGGCTTAAAAACGAGAACAATCTGTACTGCTCACATTT
GTGTTGAGGGTGTATCTAGTCCTTTCCATTTGTATCTGTGGCATATTCTG
CCTGTAATAAGTAGGAATATTAAAAACCTTCAAAAAAGGAGAACAAGCGA
ACTTGCCCCAAAAATGCGTATACAGAAGTGGAATAAGCAAGGCAATTTTC
CAATAAAAAGGGAAAGCAAAACAGGGGAATATGCGACTGTCGAACCAAAT
GGGGGCCCTAGATGTTGAAACTTAGGCCAAATTTGCATGACTATCTGGCG
TTCAAAAATGCGTCAACCTATCTGGATGTTCTTGGTAAAACACGCTATTC
ATGTTTTGTCCAATGATGTAAGTCATTAATGCGCAAGAGACTAAACAGAT
CCTAAATTCATATTTCTGATTTTAGTATAATTGTTCCAATTGTATTTAAA
AAGGTGTAAAAATTTACAAAAATGAAAATCCCGAAAAATGCAAACATTGA
ATTCGACTCAAATATTAAAAAGAAAAGTTTAAGCAGCAACACATGTTTTC
ACCATTTTTTTATTTATAGCAAGTTTCTTTCTCAAAATGAAAAAAAAATG
CAATTGGGGGAAAACCTCAAAAAAGGCAAATAATCCTCAATTTGACGCAA
GATGCAAAAATATATTTGCTAACATCCATAGTGATCTACTGGTTCTAAAA
CCAGTGGTGGGCAACGACAAAGTGTATTGTTCTTTACATATTTTCGTATA
AAAAAATAAAAAAATATTCCCATAGCATCTGCTTGCGGTGTATTATCCCA
GAAACGTGCCGTTTAAAAACACCATGGAGATTTAATTTATATAATGTTGC
AGATTATTTTAACGGCCGCTCATTGCCTAACTTGGGGTGTGAAGAGCGTT
CAAATTGCCTTTGGCGAGCATCACCTTCATCAGGACTCGGAATCAGAGTC
ATTTACCAGAAGAGCCACCAAGTTGATCATTCACGACCAGCACGTTGAAA
GGAATCCGGACTTTGACATTGGCCTCATCAAACTGGACACGCCCATCAGC
TTCGAAAAGCACATCAAGTCCATCCGGATTCCGAGCCAAAGGACAAGGTC
GCTAACAGGTAAAGTCCGTGGGTCTTAATATTCTGTGAAGAGAGTACTGA
GTTCTTTGTGGATCCACAGGGGGTATGGCCATTGCTTCAGGTTGGGGCAA
CACCGAATGGCTGGGTGGAGAGGGGAGTTCCACCCTCCAGAAAGTGAGCA
TCGGAGTCATTTCGAATGAGGTGTGCCAGGAAAAGTACAAGGATGACACC
ATTTCCGAGCGAATGATGTGCGCTGGAGTCTCCAAAGGAGGCAAGGACTC
ATGCCAAGGCGACAGTGGAGGACCGCTGATTATGAAGGTAAACATTTGGA
TAGTATTCTTTTATTCGTTTGTTATTTTGTTCTCCCCTTTTTCCTGAGCC
CAACTGATCATTATCAAATCTAAGACTATCGTTTTTTTGTACCTCCCATT
CACCTCAAGCTGAGTGGGCTGATCGGACTAGAGAACCTAACAGAGAGACG
ACATCCACCAAGTAGAAAAACACGAAATCTAGGCACGGAAACCAAAGCTA
TTGCTACACCTACGTACTAGATTAGGTTATCGTCCCCTCCCAAAAAATTA
CTGCTCTGATTTCTTGATTCTTGCTGACTGATAAATGACGTTTCTCTGCT
AGGCTCTCTAGGTGAGACTGGATAAGGATGCATGAAATGACTGCAATTTC
GTACAAGTTTTGACTTGATAGAAGTTGGTGCGAGGTAAAGGGATGATTAT
ATTCCGAAATGAATTCAGATGTAATTACTCTTCACAAGCGTGGGTTAAAA
TCATATCAACCAATGTGATTTGTTTCCGAATATTTGTCTCCAAATGAACT
TATCATGGGCTATAAGGATTATGAACTAAAATTATCTACAGCGTAAGCAC
CTCGACACATCCATACAAGCGTTAGCCCGACATCAAAGATATATAATATC
GTTAACTCAATAGGCAATCCGAAGATGCAATGCACACAAGTTTTCCAATC
CAATACCATTTAGAGCGGCAGAAACTGTCAGAAGCTAATCAATTGGCGAT
GTTTGATCAAGTTTGAAGAATCCCGATCAGACTTGCACATAAAGTCATCG
CTGAGAGTCGTTATTGGCTATGGAATATGAATAAAAAATGAGCTCAGAGA
TTGCAGTTGGATTGGTAGCCTCAGCTAATGAATGCAAGGTCCAGATTGAT
GATCCTGTTGAGTCTCCGGGGTGCACACATCCCGTGGTCATTTCTTCATA
TTACACTCTCTGAGCCATCCTACCATTGTTCCACTAATGGTCCAATCATC
TTCATCTGTTCCAGGGTCGATTGTTGGGCTACGTCCAAGTGGGCATCGTC
TCATGGGGTCGAGGCTGTGGTTTTGCCCAATACCCCGGAGTGTACACGAG
AATTTCCAAGTTCTCGGACTGGATTCGAACCAATGCCGAGAAATGAACAA
ATCCTAAGCATGTTTTGTCTACATACCATTCAGCCAC
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