maker-scaffold539_size142544-snap-gene-0.21-mRNA-1, maker-scaffold539_size142544-snap-gene-0.21-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold539_size142544-snap-gene-0.21-mRNA-1
Unique Namemaker-scaffold539_size142544-snap-gene-0.21-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold539_size142544supercontigscaffold539_size142544:37544..40733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
eukaryotic translation initiation factor 4emaker-scaffold539_size142544-snap-gene-0.21Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:474maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:474Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:475maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:475Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:476maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:476Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:477maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:477Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:478maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:exon:478Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:five_prime_utrmaker-scaffold539_size142544-snap-gene-0.21-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cdsmaker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cdsmaker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cds-1973797Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cdsmaker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cds-1973798Tigriopus kingsejongensisexon
maker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cdsmaker-scaffold539_size142544-snap-gene-0.21-mRNA-1:cds-1973799Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1973800auto1973800Tigriopus kingsejongensispolypeptide
Tk01720Tk01720Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01720

>Tk01720 ID=Tk01720|Name=Tk01720|organism=Tigriopus kingsejongensis|type=polypeptide|length=216bp
MADQDLSDSSGPNHVQDAADSEAIEESQDPEMLIKHPLQNEWTLWFFKND
RARSWEENQRPIITFTTVEDFWALYNHIERASRLQSGCDYSLFKKGIKPM
WEDDNNKRGGRWLINLDKKQRGHCLDNFWLEVMLCLIGETFGDDSQYVNG
AVVSVRGKGDKIGMWMGDASKGESIRSVGKQVKDRLSIDNTTTLGFEAHQ
DTMKKSGSTTKNRFLV
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mRNA from alignment at scaffold539_size142544:37544..40733+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold539_size142544-snap-gene-0.21-mRNA-1 ID=maker-scaffold539_size142544-snap-gene-0.21-mRNA-1|Name=maker-scaffold539_size142544-snap-gene-0.21-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3190bp|location=Sequence derived from alignment at scaffold539_size142544:37544..40733+ (Tigriopus kingsejongensis)
TGAACGAAATGTGTCAAGATAAGTCTAACAGATTGTGTCGGGGGTCACGC
GAGACACATTCCTGTGATTGGGGCCAGAAAAAGAACCGATCAACCCCACG
GAGTCGATTGGCAGCCCACTCACCCCAGTCTCCAACTAGTCCGGAATAGT
CCGCCCGGTGTCCAGACCCACATGAGCTGGCCCAGACTTCTTGGCCCAAT
CCCAGAGCTAACCTTTGGCCAGCCTGATTCCTCAGTCAGCTCCAACAGAG
CTCACACGTTGCTAGCACGCCAGAAGCCCCATCGCTCCCAGCCGGAGCAT
TAGATCATTGCTGCCTACCCGGACCCGTGTTCAGACGTGCAACCCCCCCC
AACGAGTGCTCGAACCCACGCCCACCGCCGCTGACCCGCCCCGCTCGTGC
CAGGCCCCCTGCCGTACCCGTGTGGGACCGTGAGCCGTGGGTCCCACCAT
CATGGCCGATCAGGACCTCAGCGACAGCTCGGGACCCAACCACGTCCAGG
TAATGCTACGACCTCACCCCCGTCTCGGGTCTCCACTCAACCATGGAGTG
CTAAAAGCACCTGGAGGTCGCACAGAACGCAAATGGTGTCCAAAGACACT
ACAAAAGACTTGCGATCCAAAGACACAAAAGACTTGCGATCCAAAGACAC
AAAAGACTTGCGATCCAAAGAAGATCCTGAAGATCCAAAGAAGATCCTGA
AGATCCAAAGATCCAAAGACTTGCGTTTCGGGAAGCTCTCTAAAGTCGTT
AATGCAGTCAATTGACGGACCGGAGTTGCGCAAGACATTTCTACCAGTTC
CGTACGGTTCCACGAGTCCATATACTTCAACCTTGAACCCCATGGAACTA
GGAGAAATATCTCGCGCAATTTCCGCCCGTTAATGGATGACTTCAACGGC
TTTCGGGCTTCCTTTACCATGCTGTCTTTGGACACATTTGTCGTTCTGTG
CGACCTCCAGGTGTTTCTAGTACTCTGTGACTCAACAGACTCGGAAGGCT
GCCCGAGGAGCACGAGCTCCATCCACGTGAATTGGCTTCACTAGCTCTGA
AGACCCATTCAACTCGAACCCGTGGAAATATCCCGCTTGAGCTAGTGCCC
TCGACTCAAAAGAGTCGTGGGCACGAGAGCAACGCCTCTAGCGGCGAAAA
AGGGCAATTTTTGTTCAGGCCAAGGAGGAAAAATTCAGCAATGGGTCTTC
AGCAGTCATGTATCAAAGACAGTTGAGCTTTGTCTCCAGACCTTTCCTTA
ATTCTTTCAGACAGGGATATACTCGGCACATATCCCAAGTTTTCAATCTT
GAAATTACCCAAGCCCATCGGTAACTAGGGCGAATATGGCTATTCAAGGA
GCTCTACATAAGAACTCTTATGTAGAGCTCCTGGGGCTATTCATTCCAAC
GTGTAATGTGTGCCATTCCCGAAAGTCATTGGTCAATTTAAATTTATTCC
CGGACAGGTGCAGGCGATCCATAAGAGTTAGGGAAAGGTATCCTCCTCGG
TGTGATTTATACTGTGCCGTAGGGTAAAAGGGGTCCGAATATTCACGGCC
CGGGTTTATTCGTTTCAGGACGCTGCCGATTCTGAGGCCATTGAGGAGTC
GCAGGATCCCGAAATGCTCATCAAACATCCACTGCAGGTGAGTCCGCGCC
AAGGGCTGAATTGGGTGCCCTGGACATAGACTTCAACCGACTGGATTGGT
TATTTTTTTTTTTAGAATGAATGGACCTTGTGGTTCTTCAAGAACGATCG
AGCTCGTTCCTGGGAAGAGAATCAGCGCCCCATCATCACATTCACCACCG
TTGAGGATTTCTGGGCTCTCTACAATCACATCGAGCGAGCCTCGCGTTTG
CAATCCGGCTGTGACTACAGTTTATTCAAGGTAACTGGTGCCTATTTCGG
GCTAGTGAGACGAACACCGGATTACATCCTTCGTCTCTCTCTTCTCCCCG
CTAGAAAGGGATCAAACCCATGTGGGAGGACGACAACAACAAGCGCGGAG
GCCGCTGGCTCATCAATCTGGACAAGAAGCAGCGGGGTCACTGCCTCGAC
AATTTCTGGCTGGAAGTGATGCTTTGTCTGATTGGTGAGACCTTCGGCGA
TGACTCTCAGTATGTGAATGGAGCTGTCGTGTCAGTCAGGGGTAAAGGTG
ACAAGATTGGCATGTGGATGGGGGATGCCAGCAAAGGCGAATCCATACGT
TCCGTGGGCAAGCAGGTCAAAGATCGACTCTCCATTGACAACACGGTACG
TTGAATTGGGCCTCATGTTACTTGAGTGGTGATCCCCCTCTCATAATTCT
AGGTATTAGTAATTTGGGCTGGCTCAAATTCCTGCTTAATGACAGTATTG
CGTTCCGCATGAGTAACCAACTCCTAAAAGACGAGATGTGCGGGTTGTTT
TTTCTTGAGGGATGGGTTGGAACAATTTCCCAAAAGGCTGCACAAGATCA
GCGGCTCAACCACCCTAACCTTCTGCAATCTTCCCAGTTTAGTCGTTATA
ATAGTCCCTTTTGAGGCATTGCGCATTGGCAGCACGTTGACACCATGGCA
TTCACTGGATATATACGCTGACATGCTGGCAAGAGCCGGACCCAACGGTT
GTGAGACAAGATGAGACTATTAACTTTGTCCGCCATTTTGATTAGACTGG
TTTTTGGAGAGCTGGAGATGTCTCTGGCCTTCAAATGCATGTCTTGATGC
TTGGATAGCTATGTGCATGCCGTGATGCTCGGATGTGGATTGAATTTTTC
ATTTTAACTTTCAGACAACCCTCGGCTTCGAGGCTCATCAAGATACCATG
AAAAAATCGGGATCCACGACCAAGAATCGATTTCTAGTTTGATCATCCCG
CTGTTTTGCCACTCATTGACTCCGACTAGATTGACGACCAAGACGATCCA
CTTGTTCCTATTTATGATCCAACCCAGGCTCTCATGGCAGGATCAATAGA
ATGCCCGTTTCCTTGTTCTTGGTACCTATGCAGGCAATTGGTGCCGGCCA
CCGAGCTTGGGCTCTGGCCTGGAACATGTGGAACACCTTGGGATCGTTTC
ACGGGCAGCCACCATCACATCATGAATTTCCGTGCACTAATGACCGAGAA
TATATGTTTTGTTTTACACTTTAATACAGAACAAAACCAGAAAATAAATG
AATTGTTGCCAAGAGCTTAAAGCCTTGGAGTAATGGAAAA
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