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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold552_size138156 | supercontig | scaffold552_size138156:49061..53244 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:511 | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:511 | Tigriopus kingsejongensis | exon |
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:512 | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:512 | Tigriopus kingsejongensis | exon |
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:513 | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:exon:513 | Tigriopus kingsejongensis | exon |
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds-1978175 | Tigriopus kingsejongensis | exon |
| maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds | maker-scaffold552_size138156-snap-gene-0.27-mRNA-1:cds-1978176 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk00649 >Tk00649 ID=Tk00649|Name=Tk00649|organism=Tigriopus kingsejongensis|type=polypeptide|length=905bp
MCSAQYLLHPRVGRRRSNAQRTRYAPSPGDCRPGRVLSRPFWPFVCLCLW
LHASSAAGLAAVSASTAESSDFIQNHKPRGVSSPLPTSSPSEAPVSGLAA
SRMAPLKFTQSAYTGSILENSPGKVYVVPDAKMGLYVNASLFNANGPYRV
RFRIKSGDSEDFFKAEAELVGDFVFLIVRTRTSNPNVLNRERHPTYTLDI
RARVREARGSKGAKRGSGNRIKGLSDPKTILKVTVVDTNDLSPFFQTSRY
RFSVDEDTPLHASIGQVHAEDADEGVNGEIYYSILGSYLPSIFAVDPVTG
ILSLVRPLSFKEEPTHKLTLVAQDRGAQPIYASGQADTAAISIDVKQVNL
RDPVMQIQHLPEVIEQSNADIYAIIRINDPDPGRHGEIESVEIIEGDPEA
HFRIRPSNQGEKEFNIEVLQLLDREIAPYGYNLTIKAVDRGIPPRTNYKN
IHVQLADLNDHAPVFDQEVYEVKVKENAPINTPLVRLKVWDEDSGRNAQV
RLSIAAGNEDGQFRIHPKSGVMFVAKPLDAEKRTSYTLSVSALDDANMGM
RKQSSAKVRVVVEDVNDNDPMFESGEKIIYFNENEQPGTRVMRVNAMDAD
SGENGYISYSIANLDEVPFEIDHFTGIIQSKWLIDFESDQREYTLLVRAS
DWGSPYRRQAEMKLTVRIRDINDNRPQFERVGCVGQIGRETRPGTELITL
SALDFDAGNLISYRIVSGNADGCFALDPNTGVISVVCDLRTLPTRERVLN
VTATDGQHFSDVTPVAIKWTSSSSLLSSSDRRHSGVFSAVGTDESLFDCQ
ETDVAKRLTESLALAGRNNQIDNRVDHEEDVVHHFADGLLPAPQTAASDP
GSRFKWGQNVHQPEFDAQRMPREIRVNETMPSGSVLLKTQISGGKESNFK
GAREH back to topmRNA from alignment at scaffold552_size138156:49061..53244- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold552_size138156-snap-gene-0.27-mRNA-1 ID=maker-scaffold552_size138156-snap-gene-0.27-mRNA-1|Name=maker-scaffold552_size138156-snap-gene-0.27-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4184bp|location=Sequence derived from alignment at scaffold552_size138156:49061..53244- (Tigriopus kingsejongensis)
ATGTGCTCGGCCCAATACTTACTCCACCCTCGCGTGGGTCGGAGGCGAAG
TAACGCCCAGCGGACCCGTTACGCCCCCTCACCGGGTGATTGCCGGCCCG
GGCGCGTGCTTAGTAGACCCTTCTGGCCCTTTGTTTGCCTCTGTTTGTGG
CTTCACGCGTCATCCGCGGCAGGATTGGCCGCGGTTTCGGCCTCGACGGC
CGAGTCTTCAGATTTCATTCAGAACCACAAACCCAGGGGGGTCTCTTCGC
CCCTCCCCACCTCGAGCCCCTCCGAAGCTCCAGTCTCCGGACTGGCTGCC
AGCCGGATGGCGCCCCTCAAATTCACTCAGTCCGCCTACACGGGCTCCAT
TCTGGAGAACAGCCCCGGCAAAGTGTACGTGGTGCCGGATGCCAAGATGG
GACTCTACGTGAATGCCAGTCTCTTCAACGCGAACGGGCCCTATCGGGTT
CGATTCCGCATCAAGTCCGGCGATTCGGAGGATTTCTTCAAGGCCGAGGC
CGAGCTGGTGGGCGACTTCGTCTTCCTCATTGTCAGAACGCGAACCTCCA
ATCCCAATGTGCTCAATCGAGAGCGCCATCCCACGTACACCCTGGACATC
CGGGCGCGGGTGCGAGAGGCTCGCGGCTCCAAGGGAGCCAAACGCGGGTC
AGGCAACCGCATCAAGGGCCTGTCCGATCCCAAGACCATCCTGAAGGTCA
CGGTGGTCGACACCAACGATCTCAGTCCGTTCTTCCAGACGTCGCGGTAC
CGATTCTCTGTGGACGAGGACACTCCTCTTCACGCCAGCATCGGACAAGT
TCACGCCGAGGACGCCGACGAGGGCGTCAACGGCGAGATCTACTACAGTA
TCCTAGGCAGCTACCTGCCCTCCATCTTTGCCGTGGACCCCGTCACTGGG
ATCCTCTCCCTCGTCCGCCCCCTGTCCTTCAAGGAGGAGCCCACCCACAA
GCTGACCTTGGTGGCCCAAGACCGAGGGGCTCAGCCGATTTATGCCTCCG
GTCAGGCTGACACAGCCGCCATCAGCATCGACGTCAAGCAGGTAATCCCA
CGGGCTCTGAAAGTGTCATTAGAAATTATCCGGGGGGCGGCGCTGCCAGA
TCGTTGACGAGCCCCCCCCCCCCCCATCAGCGAACCACAGGCCCACATTA
ACTAGCCAATCCTCCTGTTACGAGGTGCGATCCTAAAGCTCAATCGAGTG
GCAGACCTTTGGGGAGGTCAAAGTGGTGGCAAATTGATGGGCCGCGTTTG
GAGCAGGACTTGGAATCTGGGCGAGTTGTGTTCTCCCAAGTGGGCACTCT
CTCGTAGTCAAGATCACTTTCGCACGATGACACCTGCTCTTTAAAAGGCC
TATAAGTGCCCCATGGGTGGTCGTGAAAGGGATAGAAGGAGCAGAAGAAG
CGCTCGACCAGAGCAAGGTCTGGAACACTTCAAAGACCGCCAAATGGAAG
GCCGGAGGCTGGCAGCTCGGCTACCATCGGCGAATGAACGACGGTTGTTC
CACCATGTCTGTTCTGTTTCCTGGCCGTCGGTGATATGACCCCTTTTTCA
GCTCTTTTGGCCATTGGGCAAGAATGCTTTTTGTGTCGTCGCTCGCCTCT
CACTTTCGAGGGATTGAACATGCTTCTTGTAAAGAACTATAAGCCCTTTG
GTGCACGTCGCAGCATTTTTTGAAAGCTTTTTTTCTTGAAGTGGCGAAGA
AAATTCTCTCACTCCCAGCTAAATGGGCCAGTTTGTCCCGTGCAATTTGT
ACAAAACACCGCACTCCAAGTCGAATTCCTCGTCTCAATGGTAATAATGA
TATACCCATTTAGGTGGAGAGGGAAGATTAGTTGCGAGTGACACCTTTCC
CTCGGCGATGACCATGGGAAAATTTTGCAGATTGAGAACTTTTCTGACGA
AAGCTTTTATGAGAGAGTTTCCACGTCAGATTGTTGCACAGTTTTTTAGC
ACTCCTCGGGAAGTTAGAAAGAGACACACGACAGGCTCAGTCGTCTCAGT
GAGTGAAAGTTTCGTATGTGTGTGTGTGTGTGTGCACACTACAATAGAGC
AGAAAAGTAGTATAGTGCAGAGTGGCAGGGAAAATTTGGTGCCAATTCTC
GATAACACGGAAGTTCACTTAAAGTGGCACACGAGTATCTGGGCTTTTTT
GCAAACATTGGGAAGATCCATTCCGAAAGTCGATCGTTCTCTACCCCAAG
GGAAATGTCGAGTTTATAGCTCCTGGAAGTTCGAGCTTTGCACTCCAGTG
GGCTCTGTGGCCCAAACGGTAAGGTCCTCGGCCCGAAACTGCATTTTTCC
AATGACCCCCTCTGGGGGAATCCCTGTGAGTAGTCGTCCTCCAATCCCAG
GCGAACATCGCTCTTCCATCCACGCACACTTTATATGACTTTGTATTCCC
TTCCAGGTGAACCTCCGCGACCCTGTCATGCAAATCCAGCATCTTCCCGA
AGTCATCGAGCAGTCGAATGCAGATATCTACGCCATCATTCGCATCAACG
ACCCTGATCCCGGTCGTCACGGCGAGATCGAGTCGGTGGAGATCATCGAG
GGCGACCCCGAGGCCCACTTCCGGATTAGGCCATCGAATCAGGGCGAAAA
AGAGTTCAACATTGAGGTGCTCCAACTTCTAGATCGCGAGATTGCCCCCT
ATGGGTACAATCTCACCATCAAGGCTGTGGACCGAGGCATCCCACCTCGG
ACGAATTACAAGAACATCCATGTGCAACTGGCCGACCTGAATGACCACGC
GCCCGTCTTTGATCAGGAGGTGTACGAAGTGAAAGTGAAGGAAAACGCCC
CCATCAACACGCCGCTGGTGAGGCTCAAGGTGTGGGACGAGGACTCCGGT
CGGAATGCCCAGGTTCGCTTGAGCATTGCTGCCGGCAACGAGGACGGCCA
ATTTCGCATCCACCCGAAGAGCGGAGTCATGTTTGTGGCCAAGCCCTTGG
ACGCTGAGAAGCGCACCTCCTACACCTTGTCCGTGTCCGCCCTTGACGAC
GCCAATATGGGGATGCGCAAGCAGAGCTCGGCCAAGGTCCGGGTGGTGGT
CGAGGATGTGAACGATAACGACCCCATGTTCGAGTCGGGCGAGAAGATCA
TCTATTTCAATGAGAACGAGCAGCCCGGAACGCGGGTGATGCGTGTCAAC
GCCATGGATGCTGACTCGGGCGAGAATGGTTACATCTCGTACAGCATCGC
CAATTTGGACGAGGTGCCCTTTGAGATTGATCACTTCACGGGTATCATCC
AGTCCAAATGGTTAATTGATTTCGAGTCGGATCAGCGAGAATACACGCTC
CTGGTGCGTGCCAGCGACTGGGGCTCTCCTTATCGACGACAGGCCGAGAT
GAAGTTGACCGTCCGCATTCGGGACATCAACGACAATCGGCCCCAATTCG
AGCGGGTCGGCTGCGTGGGTCAGATCGGCCGGGAGACTCGACCGGGCACC
GAACTTATCACCCTCTCGGCCCTGGACTTTGATGCCGGTAATCTGATCTC
CTATCGGATCGTGTCCGGAAACGCCGACGGGTGCTTCGCCCTGGACCCCA
ACACCGGCGTGATCTCGGTGGTGTGCGATCTTAGAACGCTACCCACGAGG
GAGCGGGTCCTCAACGTGACGGCCACGGACGGACAGCACTTCTCGGACGT
GACCCCAGTGGCCATTAAATGGACCTCCTCTTCGTCGTTGCTGTCATCCA
GCGATCGGAGGCACTCGGGCGTGTTCAGCGCTGTTGGAACCGATGAGTCA
CTCTTTGACTGCCAGGAGACGGATGTGGCCAAGCGACTGACCGAGAGCCT
CGCCCTGGCTGGCCGAAACAATCAGATCGATAACCGAGTAGATCACGAGG
AAGATGTCGTTCATCATTTCGCCGACGGTCTTCTCCCCGCGCCCCAGACT
GCTGCAAGTGATCCAGGCTCTCGATTCAAGTGGGGTCAGAATGTGCACCA
ACCGGAGTTCGATGCCCAGCGCATGCCCCGCGAGATCCGAGTGAACGAGA
CCATGCCCTCGGGCAGTGTGCTACTGAAGGTAAGCCCCAATGACTCGACT
CGCGTTTTCCTCACAGAATCGCGTCCCTTTGACATCTATTGCCTTACATT
GCCTTACATTGGGAGCTCGTTAAAATTCAGACTCAAATCAGTGGAGGGAA
AGAGTCCAATTTCAAAGGCGCCAGAGAGCACTAG back to top
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