maker-scaffold552_size138156-snap-gene-0.29-mRNA-1, maker-scaffold552_size138156-snap-gene-0.29-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold552_size138156-snap-gene-0.29-mRNA-1
Unique Namemaker-scaffold552_size138156-snap-gene-0.29-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold552_size138156supercontigscaffold552_size138156:111470..112434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
exosome complex component rrp43maker-scaffold552_size138156-snap-gene-0.29Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:exon:501maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:exon:501Tigriopus kingsejongensisexon
maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:exon:502maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:exon:502Tigriopus kingsejongensisexon
maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:cdsmaker-scaffold552_size138156-snap-gene-0.29-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold552_size138156-snap-gene-0.29-mRNA-1:cdsmaker-scaffold552_size138156-snap-gene-0.29-mRNA-1:cds-1996185Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1996186auto1996186Tigriopus kingsejongensispolypeptide
Tk00647Tk00647Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00647

>Tk00647 ID=Tk00647|Name=Tk00647|organism=Tigriopus kingsejongensis|type=polypeptide|length=295bp
MTELHKATVKEFKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTI
GSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQ
FKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCL
NHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRS
KLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHF
HKPGGAALSRHKLQECTALAKKHYKTIAKLIDKAGSVSKMSSRKP
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mRNA from alignment at scaffold552_size138156:111470..112434-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold552_size138156-snap-gene-0.29-mRNA-1 ID=maker-scaffold552_size138156-snap-gene-0.29-mRNA-1|Name=maker-scaffold552_size138156-snap-gene-0.29-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=965bp|location=Sequence derived from alignment at scaffold552_size138156:111470..112434- (Tigriopus kingsejongensis)
AGACTCAGCCCAAGATGACCGAGCTCCACAAGGCCACCGTCAAGGAGTTC
AAGGGCATCCAACCTCTCGAGTACTTTCGGCATCACATCGAGAACGGATC
CCGACCCGACGGTCGCTCTAACCTCACCGAGTTGAGGCCAGTGTCCATCT
CCCAAGGGACCATCGGGAGTGCCGACGGTTCGGCCATCGTCAAGCAAGGG
CAGACCATCGTGGTGTGTGGGCTCAAGCTGGAGCTGGCTCCCCCTCATGC
CAATGACCCCGACCAAGGTACGTATCAGGCTGACCAGTGCGAAGAGGCAT
TCTGGTTCCAAGTCCACTTGTGTGTTTCAGGCTTCATGGTGCCCAATGTG
GACTTTCCGCCCTTGTGCCACCCGCAGTTCAAGCCGGGCCCACCCCCGGA
GCCGGCTCAGGTGGCGAGCAAGTTCATCCACGAAGTGCTCACCAATTCCG
GCATCGTCGACCTCAAGGATCTCTGTATCCAAGAGAGCAAGTACTCTTGG
GTGCTCCACATGGATCTCATGTGCTTGAACCACGATGGCAACGTTTTGGA
CTGCGCCCTGAAGGCGCTCGTGGCCGCCTTGAACGACCTTGGCCTCCCCC
AGGTCACCATTGTGGAGGACGAGGACGCCGTGGTGGACGCCGGAGCCAAG
GTCGAGGTCAACACAGCCCAACGCAGCAAGCTTACGCTCCGATCCAAACC
CATTGCCTGTACCATGGCCATTTTCGAGGACCAAATCATGGTCGATCCCA
CCGAGGAGGAGGAATCTCTGGCCCATGCCGTGGTGACCGTGGTTCTGGAT
GCGGCCACGGGCGACCTCGTCCACTTCCACAAACCCGGGGGCGCCGCCCT
CTCCCGACACAAGCTCCAAGAGTGCACGGCCTTGGCCAAGAAGCATTACA
AGACCATTGCGAAGCTCATCGACAAGGCCGGATCCGTGAGCAAGATGAGC
TCGCGCAAGCCTTAA
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