maker-scaffold554_size137761-snap-gene-0.2-mRNA-1, maker-scaffold554_size137761-snap-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold554_size137761-snap-gene-0.2-mRNA-1
Unique Namemaker-scaffold554_size137761-snap-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold554_size137761supercontigscaffold554_size137761:74928..77387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
rna helicasemaker-scaffold554_size137761-snap-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:782maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:782Tigriopus kingsejongensisexon
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:783maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:783Tigriopus kingsejongensisexon
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:784maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:exon:784Tigriopus kingsejongensisexon
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:five_prime_utrmaker-scaffold554_size137761-snap-gene-0.2-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:cdsmaker-scaffold554_size137761-snap-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1:cdsmaker-scaffold554_size137761-snap-gene-0.2-mRNA-1:cds-1987228Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1987229auto1987229Tigriopus kingsejongensispolypeptide
Tk04067Tk04067Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04067

>Tk04067 ID=Tk04067|Name=Tk04067|organism=Tigriopus kingsejongensis|type=polypeptide|length=732bp
LQLMTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRD
LIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTREL
AKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVP
TRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVA
TPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKK
QTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKT
ALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGS
RTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRI
GRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPLRGGTDILVATPG
RLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTL
LFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALL
AHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTR
ILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRS
GRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAAL
VAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN
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mRNA from alignment at scaffold554_size137761:74928..77387+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold554_size137761-snap-gene-0.2-mRNA-1 ID=maker-scaffold554_size137761-snap-gene-0.2-mRNA-1|Name=maker-scaffold554_size137761-snap-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2460bp|location=Sequence derived from alignment at scaffold554_size137761:74928..77387+ (Tigriopus kingsejongensis)
CTTTGAGTTCCTGCAATTAATGACTAACACCACAACACCAACCAACTTCT
CTGATCTTGGCTTAATCTCTCCTTTGATGGCTCGCTTAACAGAGCTTGAA
TACCAACAGCCAACGCCTATCCAAGCGCAAGTTATTCCAAGTGTGTTAGC
AGGACGCGACCTAATTGCAGGTGCAAATACGGGTTCAGGTAAAACCGCAG
CATTTGCACTTCCACTGTTACAGCAGATCCATGAAGATGCACCTTTAGAC
CGTCGTTCGGGTAAAGGTAACTTTGTGTCTGGTCTTATCTTAGTTCCTAC
TCGTGAGCTTGCTAAGCAAGTGGCTGACAGCGTTAAGTCTTACGCAGTAC
ACTTCAATGGTGCGATCAAAACGGTTTGTGTATTTGGTGGTGTATCGGTA
AACACTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGGTGGCAAC
ACCGGGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAACTTGATA
AAGTTAAAACGCTNNNNNNNNNNNNNNGTGCTTTTTGACAAAAACCTGAT
TTTGGGTAACAAAATAGGCCACAGGGCTATTCCCAAAATGAATTGGTGAT
ATTCTAAAATTGGTAACTTTGTGTCTGGTCTTATCTTAGTTCCTACTCGT
GAGCTTGCTAAGCAAGTGGCTGACAGCGTTAAGTCTTACGCAGTACACTT
CAATGGTGCGATCAAAACGGTTTGTGTATTTGGTGGTGTATCGGTAAACA
CTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGGTGGCAACACCG
GGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAACTTGATAAAGT
TAAAACGCTAGTGCTTGATGAAGCGGACCGCATGTTGAGCCTTGGCTTTA
CAGAAGAACTAGACGCGATCTTGAAACTTCTTCCTAGCAAAAAGCAAACC
TTGTTGTTCTCTGCGACTTTCCCAGAGCAAGTTAAAACATTAACTCACGA
ATTACTGAACGACCCGATTGAAGTTCAACTTCAAAGTGCAAACGCGAGCA
CATTGGTGCAGCGTGTATTCGAAGTCGAGAAAGGACGCAAGACAGCTCTG
CTAGCACACCTGATTCAACAACACCAATGGCGACAAGCTCTGATCTTCGT
TAATGCGAAAAACAGCTGTGAGCACTTGGCAGACAAGCTTTATAAGCGCG
GTATCATCGCAGAAGTATTCCACGGTGATAAAGGGCAGGGTTCACGTACT
CGTATCCTTGAAGATTTCAAATCTGGCGAGATTGACGTTCTAATCGCGAC
AGACATCGCTGCTCGTGGCTTGGACATTGAAAAACTTCCAGTTGTAATCA
ACTTTGATTTACCAAGAAGCCCATCGGATTACATGCACCGTATCGGTCGA
AGTGGCCGTGCAGGTGAGGTTGGCCTTGCGTTGTCATTGATCGATCACGA
AGATTACCATCACTTCAAGATCATCGAGAAGAAGAACAAAATCCGTCTTG
ACCGTTATCTTGCTTCAATACATTTTTATAATGCCGATGATGACGGAGCT
NTCGGTAAACACTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGG
TGGCAACACCGGGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAA
CTTGATAAAGTTAAAACGCTAGTGCTTGATGAAGCGGACCGCATGTTGAG
CCTTGGCTTTACAGAAGAACTAGACGCGATCTTGAAACTTCTCCCTAGCA
AAAAGCAAACCTTGCTGTTCTCTGCGACTTTCCCAGAGCAAGTTAAAACA
TTAACTCACGAATTACTGAACGACCCGATTGAAGTTCAACTTCAAAGTGC
AAACGCGAGCACGCTAGTTCAGCGTGTATTCGAAGTAGAAAAAGGTCGTA
AGACCGCATTGCTAGCGCACCTGATTCAACAACACGAATGGCGACAAGCT
CTGATCTTCGTGAATGCGAAGAACAGCTGTGAGCACTTGGCAGACAAGCT
TTACAAGCGCGGTATTATCGCGGAAGTATTCCACGGTGATAAAGGGCAGG
GTTCACGTACTCGCATCCTTGAAGATTTCAAATCTGGTGAGATCGACGTT
CTTATCGCGACAGACATCGCGGCACGTGGTCTGGATATCGAAAAGCTACC
AGTAGTAATCAACTTTGACCTACCACGTAGCCCATCAGACTACATGCATC
GTATTGGCCGAAGTGGTCGTGCGGGTGAGGTTGGTCTAGCGCTATCTTTG
ATCGACCACGAAGATTACCATCACTTCACAATCATTGAGAAGAAGAACAA
AATCCGTCTTGAGCGTGAGCAAATTGAAGGTTTTGAAGTGGATGAAGAGG
CAACCGCTGCACTTGTTGCTGCATTAAAACCCGTTGCGCCACCGGCTGGT
ACAGGCAAGAAGAAAAAGAAGAAAGCACCTAAAAACCAAGATGTTTGGTT
GAGAAACAAC
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