maker-scaffold56_size446035-snap-gene-3.36-mRNA-1, maker-scaffold56_size446035-snap-gene-3.36-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold56_size446035-snap-gene-3.36-mRNA-1
Unique Namemaker-scaffold56_size446035-snap-gene-3.36-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold56_size446035supercontigscaffold56_size446035:417190..422231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
e3 ubiquitin-protein ligase smurf1 isoform x1maker-scaffold56_size446035-snap-gene-3.36Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:398maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:398Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:399maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:399Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:400maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:400Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:401maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:401Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:402maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:402Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:403maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:exon:403Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cds-2019106Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cds-2019107Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cds-2019108Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cds-2019109Tigriopus kingsejongensisexon
maker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cdsmaker-scaffold56_size446035-snap-gene-3.36-mRNA-1:cds-2019110Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2019111auto2019111Tigriopus kingsejongensispolypeptide
Tk11506Tk11506Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11506

>Tk11506 ID=Tk11506|Name=Tk11506|organism=Tigriopus kingsejongensis|type=polypeptide|length=980bp
MSGRAGPSPAHYRSSSSSVGVPKIRVTILCACNLAKRDLFRLPDPFVKLS
VDPAGGLPPGRPLWGQMHCTDTDRGTLDPKWNAHYDLMLRPTDVITISVW
NEKKAKGGEGRPGHSLTLTDGFLGCVRLLSNAVERLKDTGYQRLDLVTDP
HHAWPVKGQIVISLLSRDGQGTGSLNAVVDSLGNLRCANELPEGWEERRA
TSGRIYYVNHVTRCTQWERPSRPALSDLSLNSIPGLQHQISSTSTASGGS
ASGALAPPTQRNGHAGEGRSGRGGSRRTNGTSAAAAGPVANPSTVISPIG
LPDGFEIRHTEQGQIYFINVQTGVSTWHDPRIPKDYNLSEVFGGSSNMSN
DEVLGPMPTGWERRETSTGRPYFVDHLSRTTQFTDPRLSGHVLQKIQTHF
QQRSGPPPQTEGPPPSAPVMESNPPGASPERPAPKTSEGAPRTAEAGANV
DQTEPRSPTEESETTRPPLVPKTNGETSNNNNRSHSTSSSSSNQASSQPA
TSLANGHTPAVTPTSAAAEAAAPGASQPSTPSATSASQSTVLSNTVNAPP
TTSVTSVTTPTSSSSIRNIRATSYSRSNSTNGNNNPSHHDNEVLPKYKRD
LVAKIKLLRQELQSQQPQSGHCRLEVSRQEVFEESYRQIVKMRPKDLKKR
LMIKFRGEDGLDYGGIAREWLHLLSHEMLNPYYGLFQYSRDDIYTLQINP
DSSINPDHLSYFHFVGRIIGMAVFHGHHIDGGFTTPFYKMLLNKPINLDD
IEEVDPNLHTSLHWMLENDITGILDSNFSVEHEAFGLLQSQELKKGGKDL
EVTEKNKKEYVKLYVNYRWCRGIEQQFLALQKGFNELIPQQLLKPFDERE
LELVIGGIGKIDIEDWKTHTRLKHCNTDTPVVKWFWEIVDGYSEEMRARL
LQFVTGSSRVPLQGFKALQGSTGAAGPRLFTLHVIEVSLENLPKAHTCFN
RLDLPAYESQTKMHDKLTQAVEETCGFAVE
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mRNA from alignment at scaffold56_size446035:417190..422231-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold56_size446035-snap-gene-3.36-mRNA-1 ID=maker-scaffold56_size446035-snap-gene-3.36-mRNA-1|Name=maker-scaffold56_size446035-snap-gene-3.36-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5042bp|location=Sequence derived from alignment at scaffold56_size446035:417190..422231- (Tigriopus kingsejongensis)
ATGTCGGGCCGGGCGGGCCCGAGCCCCGCCCACTATCGCTCCTCCTCGTC
GTCGGTGGGCGTGCCCAAGATCCGCGTCACCATCCTGTGCGCCTGCAACC
TGGCCAAGCGCGACCTCTTCCGCCTGCCCGATCCCTTCGTCAAGCTGAGC
GTGGACCCCGCGGGCGGGCTCCCCCCGGGCCGCCCGCTCTGGGGCCAGAT
GCACTGCACGGACACGGACCGCGGCACGCTCGACCCCAAGTGGAACGCCC
ACTACGACCTCATGCTCCGCCCCACCGACGTCATCACCATCTCCGTGTGG
AACGAGAAGAAGGCCAAGGGCGGCGAGGGGCGGCCCGGCCACTCCCTCAC
GCTCACCGACGGCTTCTTGGGCTGCGTCCGCCTGCTCAGCAACGCCGTGG
AGCGGCTCAAGGACACGGGCTATCAGCGCCTGGATCTGGTCACCGACCCG
CACCACGCCTGGCCCGTCAAGGGCCAGATCGTCATCTCGCTCCTCTCGCG
GGACGGACAGGGCACGGGTAAGCCGCGAGCCGGGGGTCATGACCCCCCTC
TCTTAGTCTCTAACCGGGGGCTGACAGCTCAGCCACCCCCGTTGTTCACC
CATACCGTCTGAGCCCATTCGGGCGCCCCGAGCGGCCCCACCTCTGGATC
AGATTCCGCGCCGTGACCCGGCTGAGCAGTCGGGGGGGGCCCCGTCGGGT
CGGCAGTCACGAGTGGGAGCCAGACGGACGCGTGGGGACCGGGCACGCCC
TGGGCGGAAATGTGATAAAAAAAGCCAGCGCACCGTCGGACCCTAGCCTG
ATGACAGCTCATTCATAACCTGAGAGCGATGGCGTGACTGGTTTCGCTGG
TATCAAACCCGTTAACTCGGCCCGAAAGTCCCGCGTCAGGCTGAAAGTCC
GGCCCAGGAGCCTCGCCCGGCTGCGGCGAGCCCCATGGCCGACGATGGCC
CTCGATCCCCAGTGAGGTGTATCCGTCTCGTTCAATCCCAGGTGTATTCC
ATGGGGCCGGAGCCGCTTCAGGCCCCATCCCCACACTTTTGAGCGTCCGA
GGAGACTCATTACGCGTCGCGGCTCGCGATCAAACTGGTCGGCCGAGAGC
TGGGGTGGGTGTGATAAGGGCTCGATCGAGGGCTCCGATACCGACCTGCA
TCACCCATGACCTCAGCGCGGGCCTTCAAAATGGAGCCTTTGGGGACCCA
TCCGCAATATTAGCCACATCATAGGTCACCCAATATGTAGTACGTGCCAT
TATTGGCCATTTCGGCCATTATTGGTCCCGGACGCGTGACTTGGCAGGAT
GTTGTGGGGCTCTCCACCCCTCGGTCAGGCCAATTAGTCCACTTCACGCC
GCGAGGCCCCATAGAGCAGGCAGGGTATGTGCAGGCATGTGCCAAGCCCC
CCCTAATCGAATATGGAGTAATGAGCCGAGCTCCGCTTTCCAGGGAGTTT
GAATGCTGTGGTGGACAGTTTAGGGAATCTCCGTTGTGCCAATGAATTGC
CCGAAGGTTGGGAGGAACGCCGGGCCACGTCCGGACGGATCTACTATGTC
AATCACGTGACTCGCTGCACGCAGTGGGAACGACCGTCGCGGCCGGCCTT
GTCTGACCTCAGCCTCAACTCCATTCCCGGTCTCCAGCACCAAATCTCGA
GCACAAGCACGGCCAGCGGTGGATCTGCGAGTGGCGCACTCGCCCCGCCC
ACCCAGAGAAATGGCCATGCTGGCGAGGGCAGAAGTGGGCGTGGTGGCTC
GCGACGGACAAACGGCACTTCCGCCGCCGCCGCTGGCCCGGTCGCCAATC
CCTCGACTGTGATATCGCCCATTGGCTTGCCCGACGGATTCGAAATCAGA
CACACTGAGCAGGGTCAGATCTACTTTATCAATGTTCAAACAGGTGAGCA
ATCGACAGGCTGGGTGATTCTCTGGCCCAAGTGCCCCCCCCCCCCCCAAG
TGTCTGCAGGGAAAGCTGACCGATCGATTTTTGCTTACAGGTGTGAGCAC
CTGGCACGACCCTCGAATCCCCAAAGACTATAATCTGAGTGAAGTGTTTG
GCGGATCGAGCAACATGTCCAACGATGAGGTTCTGGGACCGATGCCCACA
GGTAGGCCACATCAATAAACGATGGCCCCATAAACTGGGCGTGATTTCAT
GTGGGCATGATTTCAGGTTGGGAAAGGCGAGAGACCTCGACGGGACGGCC
TTACTTTGTGGACCACTTGTCCAGGACCACACAGTTCACCGATCCGAGGT
TGTCTGGACATGTGCTCCAGAAGATACAGACACACTTTCAGCAGCGGAGC
GGCCCTCCCCCTCAAACTGAGGGCCCCCCACCCTCTGCCCCCGTTATGGA
GAGCAACCCCCCCGGGGCGAGTCCGGAGAGACCGGCGCCCAAGACTTCCG
AAGGGGCCCCGCGAACGGCCGAGGCTGGTGCTAATGTGGATCAAACGGAG
CCTCGATCGCCCACCGAGGAATCCGAGACGACCCGCCCCCCTCTGGTCCC
CAAGACCAATGGAGAGACTAGCAACAATAACAATAGGAGCCACAGCACTA
GTTCCAGTAGTAGTAATCAGGCGTCTTCCCAGCCGGCCACATCTCTTGCC
AACGGGCATACTCCTGCCGTCACGCCCACGAGTGCGGCGGCTGAGGCGGC
CGCCCCTGGGGCCAGTCAGCCCTCCACCCCGTCAGCCACATCTGCCTCCC
AGAGTACTGTCTTGAGCAACACGGTGAACGCCCCACCCACCACCAGCGTG
ACCTCGGTGACCACGCCCACGTCATCGTCTTCCATCCGCAACATCCGAGC
GACGAGCTACAGTCGTTCCAATTCCACCAATGGGAACAACAACCCGAGCC
ACCACGACAACGAGGTGCTGCCCAAGTACAAGCGCGATCTCGTGGCCAAG
ATCAAGCTTCTGCGGCAGGAACTCCAGTCGCAGCAGCCTCAGTCCGGCCA
CTGTCGCCTCGAGGTCAGTCGGCAGGAAGTGTTCGAGGAAAGCTACCGAC
AGATCGTCAAGATGCGCCCCAAGGACCTGAAAAAGCGGCTCATGATCAAG
TTCCGTGGCGAGGACGGGCTCGACTACGGCGGGATTGCGCGCGAGTGGCT
CCACCTCCTGAGCCACGAAATGCTCAACCCCTACTACGGCCTGTTCCAGT
ACTCGCGGGACGACATCTACACGCTGCAAATCAACCCGGACTCGAGCATC
AATCCCGATCACTTGAGCTACTTTCACTTCGTGGGCCGCATCATCGGGAT
GGCCGTCTTCCACGGCCACCACATCGACGGCGGCTTCACCACGCCATTCT
ACAAGATGCTGCTCAACAAGCCCATCAACTTGGACGACATTGAGGAGGTG
GATCCAAACCTGCACACCTCGCTCCATTGGATGCTGGAGAACGACATCAC
GGGCATCCTCGACTCGAACTTCTCCGTGGAGCACGAGGCCTTTGGACTGC
TCCAAAGCCAGGAACTCAAGAAAGGTGGCAAAGATCTCGAGGTAGGCAAA
AATACACGCTAATTACCTACTCCTGGGGGTCGGTATTGCCAATCAGGTAA
TCCATTAGGCCTGACCCAGACATTCCCTGAACTGAGCCGAGCGCACAGTG
ATGTTCACAAGGTGACCTGAGCTAACTGAGGGTGTAAAGCCTCAGGGGAT
TTGCGTTCTATGCAAAATCACTCCCGATTAAAGCGCCTAATGTGGCTCAT
TGCCGTCATGGCATTCCAGCGACTCGTGCCTCGAGTCTGGGATATATCCG
CTCATTGCGATAGCTTCTCATGTGGTTGTTTTCATCTCCTTCAGGTCACC
GAGAAGAACAAGAAGGAGTACGTCAAGCTGTATGTGAATTACCGTTGGTG
TCGAGGCATTGAACAGCAGTTCTTGGCCCTTCAAAAGGGGTTCAATGAGC
TCATTCCACAACAGCTCCTGAAGCCCTTCGATGAGAGAGAGCTCGAGCTC
GTCATAGGTTTGTACACGCCATTTTTGCTCTCACTTCACTTTCCCACACC
TGCTTAGATGGCCTCATAATGCCTTCATGCTCACCCGTACTAGCTCACAA
TGTTGGCTTGCGAGCTAATTGACTGATGGTCGGCATTAAATTTGGCCCCA
TTGGTCCCATGTGTGGACGACTTGCCAGTCCCGGTTGACCCTTGCTCCTT
CCTCCAAATATGTTGTCATTAGTCGAATCTGCACATATTTGACGATGGAG
CACCGAAAGGGAAGAGCTATTTCCAGTTTCCACCGTCACGATGGATGATT
TTGATGGCGCACTTCCTAATTAGCAGTTGATTTGGCCCAAAATTAAAAAG
GTGGGACTGCATGAACCCTCCTCCAATATGGTGGGTGGTTCTTCCAGGAG
ATTGGCGAACACTACTCACACCTGTCCGATTTCTCCTATCCTCGATGGCT
GATTGGGACTCCGATCAGTATCGCCTTGTCACCCGAGCAATCACTGCCAA
TATGAAGCGACTCTCAAACATGCGGTCTTCATGTGTTTATGCATATATCT
ATTAGGCGATTAGCAAAGGAACGGGGGATATCCTCGCCTGCCGCCACAAG
CACCTTTTTCCTTCGACTTCAACGAAATCCCAAGTTTTGGGAAGGACTTC
TTGATATACCCGCGTCTTTGGTGGTCAAGCAACCGCTTCAGTCTAATGTT
TCACTTCTTCTGCAGGCGGCATCGGCAAGATCGATATTGAAGACTGGAAG
ACGCACACCCGACTGAAGCACTGCAATACGGACACGCCCGTGGTCAAGTG
GTTCTGGGAGATCGTGGACGGCTACTCGGAGGAGATGCGGGCCCGGCTGC
TTCAGTTTGTCACGGGCAGCTCCCGGGTGCCGCTGCAGGGCTTCAAGGCC
CTGCAAGGGTCGACAGGAGCCGCTGGGCCGCGGCTCTTCACACTCCACGT
GATCGAGGTCTCTCTGGAGAACCTGCCCAAGGCTCACACTTGCTTCAATC
GCCTCGATCTGCCTGCCTACGAGAGCCAGACCAAGATGCACGACAAGCTC
ACCCAAGCCGTGGAAGAGACCTGCGGCTTTGCCGTGGAGTAG
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