maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1, maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1
Unique Namemaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold5_size1054832supercontigscaffold5_size1054832:518786..521290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AGAP009281-PAmaker-scaffold5_size1054832-snap-gene-5.9Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:343maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:343Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:344maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:344Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:345maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:345Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:346maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:346Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:347maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:exon:347Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:five_prime_utrmaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cdsmaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cdsmaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cds-2020161Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cdsmaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cds-2020162Tigriopus kingsejongensisexon
maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cdsmaker-scaffold5_size1054832-snap-gene-5.9-mRNA-1:cds-2020163Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2020164auto2020164Tigriopus kingsejongensispolypeptide
Tk04038Tk04038Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04038

>Tk04038 ID=Tk04038|Name=Tk04038|organism=Tigriopus kingsejongensis|type=polypeptide|length=227bp
MNFFVAGKAYFSPLIKPAYVSEVETASNGKMMQSLVIALCLTLLSREASG
QELSFGQCQTFPVIKNFQPDRYLGKWYEYSNYFFFFQLFGKCVTATYTDN
KGQRIGVLNQSINEKNGRRNEARGEALLKPGNQGLGRLIVNFDDQPFFVR
SNSPNYFVVDTDYENFSIVYTCQNRVGILKSEILWILTRERFPSQRLIQE
VISKIKRAGLDPTRLRKTDQNSCPDNH
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mRNA from alignment at scaffold5_size1054832:518786..521290+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1 ID=maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1|Name=maker-scaffold5_size1054832-snap-gene-5.9-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2505bp|location=Sequence derived from alignment at scaffold5_size1054832:518786..521290+ (Tigriopus kingsejongensis)
CCAATTGGGACGTTGGCGCTAAAAATGTTGATCTGACGTACAAAATTGTG
GATAGGGTGACGTTGCAAGACCGCCTTTGAATCCCTTCTTTTCACATGTT
TTCTTTGAAACGGCCAATGATTGCGTTTTGAGAGCTCGAATTTCGCTGCA
AGTGTGGCCACTCCTTCAAGGTTGAGTGTCGGCGAGTTGTGTACATGAAT
TTTTTCGTCGCGGGTAAAGCTTACTTCAGTCCACTGATCAAGCCAGCGTA
CGTCAGTGAGGTGGAAACCGCGAGCAACGGTAAAATGATGCAATCTTTGG
TGATTGCCTTGTGCTTAACTCTGTTAAGTCGAGAAGCAAGTGGCCAAGAG
TTGAGCTTCGGCCAGTGTCAAACTTTCCCGGTCATCAAGAACTTCCAACC
GGATAGGGTAAGTTGATTTGAATTCGGGGGAAATGTTTGGCTAATTGCTG
TTCTGTCGGTTTCTAGTATTTGGGGAAATGGTACGAGTATTCCAATTACT
TCTTCTTCTTCCAATTATTCGGAAAATGTGTCACAGCCACCTACACTGAC
AACAAAGGCCAACGCATTGGGGTGCTGAATCAGTCCATCAATGAGAAGTA
GGGTCGTTATGTAATATTTTGGCTGGCCCAAAGCCTTATTCATCCCACGC
TGACTATTCCAGGAATGGACGGCGAAATGAGGCCAGGGGCGAGGCCCTTC
TCAAGCCGGGAAATCAAGGCCTAGGCCGACTTATCGTCAACTTCGATGAT
CAACCTTTCTTCGGTAAATTCTTGCCTCAAGGCCAGAGCTCTTAAGACAG
TCGTCTCATAGAAGGTTAATCCTTTCAGTGAGGTCCAATTCGCCCAATTA
CTTCGTGGTGGACACAGATTACGAAAACTTTTCCATCGTCTACACTTGCC
AGAATAGAGTTGGAATCCTCAAATCAGGTAATATATGCTTGGCTCAAGGT
AACCATGACATTCTTGGATGCTGAATGACCCCCTCAGATATGCTGGATGG
TTACGAAGTCTGTTTACATTCTTTTGGTCAACCGACCGTATCTAGTTATA
GCATTCTGAAAAGCCAGAATGTCACAGAGTTGTACCGTTATAGCTTATTG
AATTTAGTCCGTTGAATGGAGGAGCACGCAGGAAGTTGCCTAATCAAGGC
ATTGCACGAATGTGTCACGTAGTACTCTTAGCAATATCCAGGGCTAGTTT
GCACATTTCATTGGTAGTTGCGGTTGGATTTTTTTCGAAGATATTATCAA
GATAAGTTTAAATTGAAAGGTGGGCAATGTCTACAAAAATGTACTTCTTG
CCATCAAAATTTGTTTTTTTATGAGCTGGGGAAGGCAAACATGGATTTGA
CAGAAGCTCTCAATCTTTTCAAGGTTTAAATATTTACAGCATTTGCCGAC
AATGTATGCCTGTAACGTTGGTTGCCGAAGCATAACATGTAGAATGGGTA
ATTTAGAGACTCCCTTCAAGTTGGAACCTATTTTTTTCTGAAATTGTGAT
GTACTGTTTGATTCAGAGTTGCAACAACTTGTATGTCATCTTTAAATTGA
TGCATCGATCATTTCATACCTGAAATCTACATTTAGGTCGATATTTAAAG
AAATAATTTCTTCGGCAAATTATGAAATACTTTTTCCAAAAAAGTGCTAG
AGACAAATTTTATACCAGGGTAATTTGACCGAGATCCCGAGCGTTTCGCC
AAACATTTGACTTTATTTTGGTTTCCGAGTTTTTACGTGTTGCTAAGGTG
GAACATAAAGAAATCGTTTGGTGCACCACAATTAAGAGTTTGACAATAAC
TTAGTTATCTTCAAAGCACCGAAATAATTCACATTGAGTATACTTTTCCC
AGTTATTTGTTCTTTTTTCAGATTTTTGTCCATTTTGAAATGTGTTTCTG
TATCGTTGCATTTATGGAATAAGATATTGGTGTAGCGGTTAGGCCACTAC
CGGAGTCTGGAGATGGTATATGACTCCTCGAGTCGAGAGATGGTAGATGA
CTGAGTATATTGGAGGCGGGAAAGGTATATATATAGGCTAGCGCCCTGCG
AGCATACCGGTTACACAGAACCGGCTCGCAGGGTCGCCACATTGGAATAT
TATTTACGCATATGGCGTTTTTTTCATATCCTTTTATACGTAGTTGTAAA
CAAAAGTATGTCGGAGGAGAAGGTTGGAAGCTTGCTAGCTAATATTGGAG
GAGGTTTGAACAATGTTCAAATGAGGGACTTGAAGGATGAAAATAATTAG
GAAGGACATTGATATTCTTTCAGAAATCTTGTGGATTTTAACCCGTGAGC
GGTTCCCAAGTCAAAGGTTGATTCAGGAGGTGATTTCGAAGATCAAACGC
GCCGGACTTGATCCAACTCGCCTTCGAAAGACCGACCAAAACTCGTGCCC
CGACAATCACTAACCAACGAGTTAATTTGTGTTTTATGTTGCAGCTTGAC
TTACGTATGCTTCAAAAATTAATATAGTTATGCAATATTAAAGGGCTGAA
TTGCA
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