maker-scaffold629_size122686-snap-gene-0.24-mRNA-1, maker-scaffold629_size122686-snap-gene-0.24-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold629_size122686-snap-gene-0.24-mRNA-1
Unique Namemaker-scaffold629_size122686-snap-gene-0.24-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold629_size122686supercontigscaffold629_size122686:42573..45396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
transmembrane emp24 domain-containing protein 5maker-scaffold629_size122686-snap-gene-0.24Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:280maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:280Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:281maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:281Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:282maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:282Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:283maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:283Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:284maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:exon:284Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:five_prime_utrmaker-scaffold629_size122686-snap-gene-0.24-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cdsmaker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cdsmaker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cds-1975596Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cdsmaker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cds-1975597Tigriopus kingsejongensisexon
maker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cdsmaker-scaffold629_size122686-snap-gene-0.24-mRNA-1:cds-1975598Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1975599auto1975599Tigriopus kingsejongensispolypeptide
Tk00804Tk00804Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00804

>Tk00804 ID=Tk00804|Name=Tk00804|organism=Tigriopus kingsejongensis|type=polypeptide|length=243bp
MNLSHLVVFLLIPLWVACEEASVEVVFDPNQGAQGYQRRYNIDVPHRTEE
CFFIENVREKQILNFHFMVTNTDKNGKPLDISAKVKSPAGKIVTFQHRKT
EAKVIAHETLTNGDYEVCFNNKYSLTESKRVFWQFEVEGLEDEVRDEEKA
IQGVLSEYEDTAKDTKKRISMVRTKVSRIKHNQWRHETLMKKDINRAEAI
GDMINRWSIIHIVVVLTVGIMQVVVLRRFFTINKAPQKLKARA
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mRNA from alignment at scaffold629_size122686:42573..45396+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold629_size122686-snap-gene-0.24-mRNA-1 ID=maker-scaffold629_size122686-snap-gene-0.24-mRNA-1|Name=maker-scaffold629_size122686-snap-gene-0.24-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2824bp|location=Sequence derived from alignment at scaffold629_size122686:42573..45396+ (Tigriopus kingsejongensis)
AGGAATCGACACTTAGACAGCTATTTGTAAAATATAAAACAATGAACTTG
TCCCACCTTGTTGTGTTCCTTCTCATCCCACTTTGGGTGGCATGCGAAGA
GGCCAGTGTGGAAGTCGTTTTCGACCCCAATCAAGGAGCTCAAGGATACC
AAAGGCGATACAACATTGACGTGCCCCATCGCACCGAGGAGTGTTTCTTC
ATCGAAAATGTCCGCGAGAAGCAAATCTTGAATTTTCACTTCATGGTGAG
TGGCCAATGGAGCATCCGAAAACATCCTTTAGTACCATAGCGCACCAGTT
TTGGGATCAGCCTAGAGCTTGGTTGGTGGAGCATTAGCCTAGCCATAACC
AATAGGTAAACCAGGGCAAGGAGTGTTTGAGGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGTTCAGCCAGATCTGTTGAGAATTACTCAGAAGAGTTTGTC
ACTTAAAAGGTCTAGGGGGGGGGGGGCATTCTTTTGTTTTCTCAACATAT
GCATTTATATGTACTAAGTACCAAAAACAAGCACGACAATTTAAATGCTG
CCTTGTGCAATCACTTCTTGGACCAAATTTTCCTTTCGCCGTTTAAAGGC
CACATATATCGACACCGAAAGGGTGAAAGTCAAGGAGGTTCTACAGTATA
TCTGGAGTGAGCGTACCTGGGAAACTGGCTAAAGGGAGAACCGACAACCA
GGCAGCTGATCTATATCCATAAAAGCTTTGCCTGGGCTTCTGATGGATGG
CGCAGCGCACCAGAGAAAGCGCACGAAATTGGACAGGCAAAGGCATATCG
TTTTTGCATTTAGATCAGCAGCCCTGTTGTCACTCCTTAAGTGGCTTGCT
CTGGTTATGTTACCTCAATGTTGAAAAGGGGACAATTAAGGTCACCTTTG
AACCGATTGGATTCAACGGAAAACAAAGGGATAGATAGCTCTCTCATTTG
CAATATCATCTGTTAATAGGTATTTATTTCTCACTGGCTAACGGTTCCAA
CTAACATGGACTCTGTTTTTTTAGAAAGTACAAATTGGGCAAGTGGCGGG
CTCCAATCTTAAGCACTCCATGGTCAGAGGGTGCCACCTAACTCTTAAAG
ACCCAGCTTTCAAAACCTGAATTGTGGGACGTGTTCGGCTTTGATTTTGC
AGATATTTGAAACCAAATCAACTTTCAGGTGACTAATACTGATAAGAATG
GCAAACCCTTGGACATTTCCGCCAAAGTGAAGTCTCCGGCCGGGAAGATT
GTAACCTTTCAACACCGCAAAACCGAGGCCAAGGTTATCGCTCACGAAAC
CTTGACTAATGGGGATTATGAAGTGTGCTTCAACAATAAGTAAGTCGAAA
TGAATCCACGAGATCACTCTACCATTTGATGTTGACCAAACGTAAATTAA
AAAGCGTCACTAACAACAAAAAATATAGATTAATGACTAGGGGTCGGAAA
AAGTGAACTATTGTTTTCTCAAAAAACTCTGTTAATGACGTCAACGTCTT
TTGCACCCTTTGCCTATTTTTACAAACTTTCACTATAGTTGGCCCTTTAT
AGGACCATTTGGTAATTTACCTCAAATTGCTGTCATATGCCCGGAAAATG
GTCCTTTTCCCCAAATAAGTCCGATAATGCCAAAACCTAAAACCGCTTTC
GTTCTACCGATATGTATTTTTTTCCTTTTCACGCAACCTTTCTCAATACA
CTTTATGTAGATACTCACTGACCGAATCCAAGCGGGTCTTTTGGCAGTTT
GAAGTTGAAGGCCTTGAGGATGAGGTTCGAGATGAGGAAAAGGCCATTCA
AGGAGTCCTCTCCGAGTACGAGGATACGGCCAAGGATACCAAGAAAAGGA
TCAGTATGGTATCGACAATCTTCATCTAAGCGTAAAACACCAACACATTG
TAATTGAACTTACCTTCTTTCCTAGGTGCGGACCAAAGTATCACGCATCA
AACACAATCAATGGCGTCATGAAACTCTCATGAAGAAAGATATTAATCGT
GCTGAAGCTATTGGAGGTGAGTTTAGCCAGGTGATATCTCGTGTCACCAC
TTGATCTATTTTTAGGCTTTGAAAACAAACGTGATACATTCAAAACATGA
TTTTCACTTTTTTGCCCATTTTGACATTTTTTGGAAAGTTTTTTTCGGTT
TTTGCACATTAAAGTAAAATTTATTGGACAATATCTCTTTGAATATTCTT
TCAGCATATACAAAGAACGGAAATGGTCACAAAAAAACACATTTTCCTTG
TTTTGTCTGCACCTATTTTTTTTTATAATTTTTTCTCGAGACCTACTCGA
TGTCTAAAAAAGTGACTGAAAGAAAAGTCAAAAAAATGACAAGATGAAAA
AAAAAAAATTGCAACCTCTGAAGTAATCGTTAACATGGGAACGTTTTTTC
GACAAAATCTTGGGGATTGATTTGGCTTGCTAATTTCGAAAAAATGCGAA
AATACTTAGGGAAACTAACATGGCAGAGAAATGATATGAGAGCAAATAGT
TCGAAGGTGTGCTTTGTTTTGTTTTTGCCCAAATGGCCAAATCCAAGTGC
AATCATCATAAAATGTGTTTTCTTTTGAAATATGCTTCTTTTCGAAAATA
TTGATTACTCTCTTCCCTTCCAGACATGATCAATCGGTGGAGTATCATTC
ATATTGTAGTGGTCCTCACGGTTGGGATAATGCAAGTTGTGGTTTTGCGG
CGATTCTTCACCATTAATAAAGCTCCGCAGAAGCTGAAGGCCAGGGCCTA
ACTCTTATATAAATTGTTCACCTTGCCCTGTGTTCCGGACTAAGCTGAAA
AATATACAGACTTCTCAAAGCGTG
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