maker-scaffold651_size119386-snap-gene-0.23-mRNA-1, maker-scaffold651_size119386-snap-gene-0.23-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold651_size119386-snap-gene-0.23-mRNA-1
Unique Namemaker-scaffold651_size119386-snap-gene-0.23-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold651_size119386supercontigscaffold651_size119386:44423..47524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein LOTGIDRAFT_121549maker-scaffold651_size119386-snap-gene-0.23Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:900maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:900Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:901maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:901Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:902maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:902Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:903maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:903Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:904maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:exon:904Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:five_prime_utrmaker-scaffold651_size119386-snap-gene-0.23-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cdsmaker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cdsmaker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cds-1976325Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cdsmaker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cds-1976326Tigriopus kingsejongensisexon
maker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cdsmaker-scaffold651_size119386-snap-gene-0.23-mRNA-1:cds-1976327Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976328auto1976328Tigriopus kingsejongensispolypeptide
Tk06040Tk06040Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06040

>Tk06040 ID=Tk06040|Name=Tk06040|organism=Tigriopus kingsejongensis|type=polypeptide|length=851bp
LLSTLTTPAMGPKATPPDVKEQPSEREAWLDVQPVAPADPEEETESSHLL
VPDELLEQEQRVREANERAEAVENRQERSVVDALSQEERYRKLMDLLSRS
TFYSEFLLKKMKAEDEATRLKDQKREDRKRWQAAHPTPPPKSEPARGRKR
GAKRKATELEASSSPEPLPAPSSGSLGVRSVGGEAISDEQPLLLTGGVMR
DYQIKGYQWMATLFENGINGILADEMGLGKTIQTIALFCHLIEMGVPGPY
LIVAPLSTVTNWVKEFGRFAPQIPVVLYHGQSQVRAEKRQRLQESVAIEG
IPVKVKHVFVTSFEIAMNDTAHLRHVNWRYIVVDEGHRLKNSNCRLIREL
RKYQSANRLLLTGTPLQNNLAELWSLLNFLMAEIFDDLRVFESWFDAKDM
DVDQSESDRILKQEKQNNILSTLHQILTPFLLRRVKADVDLKIPPKKEVL
VYCPMTATQREMYENIVSKTISEHLAPQKGPSSATKLNANMVGGRGMRKK
ESIDYKVLLEESVSEKKLAAFLDAMARKEESFKSKTSSCAYNHEQNTSSS
DLRISMKSRIMDLRKATNHPYLIEHPYTECGNFYRSDQAMIDACGKLKVL
DQLLSELIKRGHKVLIFSQMTRMLDILGDYLELKAFKFSRLDGSMHFEDR
QTNIDQFNEDPKVNVFLLSTRAGGLGINLTSADTCIIYDSDWNPQQDLQA
QDRCHRIGQTKPVMIYRLVTANTIDQRIVERAAAKRRLEKLIIHSKKFKS
QDSEGLKKTMEGITPQELLELLESEDHAGVVDRGEGPVFSAAELDLLLDR
SDLRWRKLGAESKRAKSSKSAPKSACDVTSVFQVVDTEGIPNGLSSVKEE
E
back to top

mRNA from alignment at scaffold651_size119386:44423..47524+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold651_size119386-snap-gene-0.23-mRNA-1 ID=maker-scaffold651_size119386-snap-gene-0.23-mRNA-1|Name=maker-scaffold651_size119386-snap-gene-0.23-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3102bp|location=Sequence derived from alignment at scaffold651_size119386:44423..47524+ (Tigriopus kingsejongensis)
GGCCTTTTTTTTCGAATCCCAAATCGCGCCGGTGGATAAAAAGCACAATT
TCCCAGCCCCAGTCGATTGCTTTCGACACTGACAACGCCGGCCATGGGAC
CCAAGGCCACACCCCCGGACGTGAAGGAGCAGCCGAGCGAGCGAGAAGCC
TGGCTGGATGTCCAACCCGTGGCACCCGCCGACCCGGAGGAGGAGACGGA
GAGCAGCCATTTGTTGGTGCCCGACGAGTTGCTCGAGCAGGAGCAGCGGG
TCCGGGAGGCCAACGAGCGGGCCGAGGCCGTGGAAAACCGGCAGGAGCGG
AGTGTGGTGGACGCCCTGAGCCAGGAGGAGCGCTATCGGAAGCTCATGGA
CCTGCTCAGCCGCTCCACCTTCTACTCCGAGTTTCTGCTCAAGAAGATGA
AAGCCGAGGATGAGGCCACGCGCCTCAAGGACCAGAAGCGCGAGGATCGG
AAGCGCTGGCAAGCGGCCCACCCGACGCCACCCCCGAAGGTAATCGGATC
AGGCGCCATTGTGTGCGACTCGTGTTCCGCCACTTTCGAGATTCTTGTTC
CAGAGCGAGCCGGCTCGCGGCCGGAAGCGCGGGGCCAAGCGGAAGGCCAC
CGAGCTCGAAGCCTCGTCATCTCCGGAGCCGCTCCCTGCGCCCAGCTCGG
GCTCCCTGGGGGTGCGTTCGGTGGGCGGCGAGGCCATCTCGGACGAGCAG
CCGCTGCTCCTCACCGGCGGAGTGATGCGCGATTATCAGATCAAGGGCTA
CCAATGGATGGCTACCCTCTTTGAAAACGGGATCAACGGCATCCTGGCCG
ACGAGATGGGATTGGGGAAAACCATTCAAACCATCGCACTCTTCTGCCAC
CTCATCGAGATGGGTGTGCCCGGACCGTACCTCATCGTGGCTCCGCTCTC
GACCGTGACCAATTGGGTCAAGGAATTCGGGCGCTTTGCGCCCCAAATCC
CGGTCGTTCTCTACCACGGCCAATCCCAAGTCCGGGCAGAGAAGCGCCAG
CGACTCCAGGAGTCGGTGGCCATCGAAGGGATTCCCGTCAAGGTCAAGCA
TGTGTTCGTGACCTCATTTGAGATTGCCATGAACGATACTGCCCATCTGC
GGCACGTCAACTGGCGCTACATCGTCGTCGACGAGGGTCACCGCTTGAAG
AACAGCAACTGTCGCCTCATCCGGGAGCTGCGCAAATACCAGTCCGCCAA
TCGTCTCTTGCTCACCGGAACGCCACTCCAGAACAACCTGGCCGAACTTT
GGTCGCTCCTCAACTTCCTCATGGCCGAAATTTTTGACGATCTGCGGGTG
TTTGAATCCTGGTTTGATGCCAAGGATATGGACGTCGATCAGTCCGAGTC
GGATCGGATTCTCAAGCAGGAGAAGCAGAACAACATCCTGTCTACTTTGC
ATCAGGTACGATGAGGCGAGCTGACTCGCTGGAATGGAAACTAATCGACT
CTTATTATTTTTTTGATCGCCCATGCAGATCCTCACGCCATTTCTCCTTC
GCCGCGTCAAAGCCGATGTCGACCTCAAAATTCCACCCAAAAAAGAAGTC
CTCGTCTATTGTCCGATGACCGCTACTCAACGAGAGATGTATGAAAACAT
TGTCAGCAAAACCATCAGTGAGCACTTGGCTCCCCAAAAAGGACCTTCTT
CTGCCACCAAGCTGAACGCCAATATGGTAGGGGGTCGAGGCATGCGGAAA
AAGGAATCCATCGACTACAAGGTGAGTCTGGTTGTTGTGGAGTCAAATCT
GTCCTGAGACACACATCCTTGTCACCAGGGTCGGTCGTGTCACGACGATC
CAAAGAGACGTTTGTATTGCGAGAGCCCCAACACTCTTGATGGCTACGCA
ATGCCCGTAATGAGGAGTGGGGTGTGGAGATGAAGAGATTTCCCTTCCCC
TCTCTCCCTCAGCACTGCCATGACTTGCACCAACTGTGATATGTATCTAT
CCCCTCTTTGATCAGGTCTTACTGGAGGAGAGCGTCTCCGAGAAGAAGTT
GGCAGCTTTCTTGGATGCCATGGCTCGGAAGGAGGAGTCGTTTAAATCCA
AAACAAGTAGTTGTGCTTATAACCATGAGCAGAACACTAGCTCCTCCGAC
TTGAGGATTAGCATGAAAAGCCGAATAATGGACCTCAGGAAAGCTACTAA
TCACCCGTACCTCATCGAACATCCCTACACGGAATGTGGCAACTTTTATC
GCTCGGATCAGGCAATGATCGACGCATGTGGGAAGCTCAAGGTGCTGGAT
CAGCTCCTGAGCGAATTGATCAAGAGGGGCCATAAAGTGCTCATTTTTTC
CCAAATGACCCGGATGCTGGATATCCTGGGGGATTACTTGGAGTTGAAAG
CATTCAAGTTCTCACGCTTGGACGGCTCCATGCATTTTGAAGATCGGCAG
ACCAATATTGACCAGTTCAACGAGGACCCCAAGGTCAATGTCTTCCTCTT
GTCCACCCGTGCCGGAGGACTGGGTATCAATCTCACATCGGCCGACACTT
GCATCATTTACGACTCCGACTGGAATCCTCAGCAAGATCTTCAGGTAAGA
TTGCGTGGGATCTAAGGTCGAATACCAGCGAGCTCAAGATAACCTTTTAA
TTTGTGTTCAGGCCCAAGATCGATGTCATCGCATTGGTCAGACCAAGCCA
GTTATGATTTACCGTTTGGTCACCGCAAATACCATCGATCAAAGGATAGT
TGAGCGAGCTGCAGCCAAGAGGAGGCTGGAAAAGCTGATTATCCACAGCA
AGAAATTCAAATCCCAGGATTCTGAGGGTCTCAAGAAAACCATGGAAGGC
ATCACTCCGCAAGAACTCTTGGAGTTGCTCGAATCGGAAGATCACGCTGG
AGTCGTAGATCGAGGCGAGGGTCCCGTCTTCAGTGCTGCCGAGCTGGACT
TGCTTTTAGACCGAAGCGATCTAAGGTGGAGGAAGCTCGGAGCGGAATCG
AAGCGAGCCAAATCATCGAAATCGGCTCCCAAGTCGGCGTGTGACGTGAC
GTCCGTGTTCCAGGTAGTGGACACCGAGGGGATACCCAATGGTTTATCTT
CCGTCAAAGAGGAAGAATAGTATGGCCCAGATCGTTGTAAGAGTAATTAC
TA
back to top
Add to Basket