maker-scaffold743_size103610-snap-gene-0.17-mRNA-1, maker-scaffold743_size103610-snap-gene-0.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold743_size103610-snap-gene-0.17-mRNA-1
Unique Namemaker-scaffold743_size103610-snap-gene-0.17-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold743_size103610supercontigscaffold743_size103610:125..6045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
probable nuclear hormone receptor hr38-likemaker-scaffold743_size103610-snap-gene-0.17Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:547maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:547Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:548maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:548Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:549maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:549Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:550maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:exon:550Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cdsmaker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cdsmaker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cds-1948613Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cdsmaker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cds-1948614Tigriopus kingsejongensisexon
maker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cdsmaker-scaffold743_size103610-snap-gene-0.17-mRNA-1:cds-1948615Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1948616auto1948616Tigriopus kingsejongensispolypeptide
Tk01116Tk01116Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01116

>Tk01116 ID=Tk01116|Name=Tk01116|organism=Tigriopus kingsejongensis|type=polypeptide|length=373bp
LSKMRLPLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEG
CKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEV
VRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNS
LDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIP
GINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQC
QHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVE
NLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFY
LKMEDTVPVPAVIEKMFASSIPF
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mRNA from alignment at scaffold743_size103610:125..6045-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold743_size103610-snap-gene-0.17-mRNA-1 ID=maker-scaffold743_size103610-snap-gene-0.17-mRNA-1|Name=maker-scaffold743_size103610-snap-gene-0.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5921bp|location=Sequence derived from alignment at scaffold743_size103610:125..6045- (Tigriopus kingsejongensis)
CGATCTGTCCAAGATGCGCCTCCCCCTGGGACCACCACCTCCCCCTCTCA
CCCGATCTCCGGCTTCAGGCGACCTCAAGGCCACCTCGCTCTTGTGTGCG
GTCTGCGGGGACAATGCCGCCTGTCAGCACTATGGAGTGCGAACCTGTGA
GGGTTGCAAGGGCTTTTTCAAGCGTACGGTTCAGAAGAATGCCAAATATG
TGTGTCTCGCCGACAAGAATTGTCCCGTGGACAAACGGCGCCGGAACCGC
TGCCAGTTTTGTCGGTTCCAGAAATGCTTGGCCGTGGGCATGGTGAAGGA
GGTGGTTCGCACCGACAGCCTCAAGGGTCGGCGAGGCCGGTTACCCTCGA
AGCCTCGAAGCCCTCAGGAGCAGCCGCCCTCGCCGCCCGTGAGCCTGATA
ACGGCTCTCGTGCGAGCTCACATAGACACATCACCTGATTCATCTCCCAA
TAGCCTGGACTTTTCACAGGTAAGACACACGTCAACCTTTGTCAAAATAA
AACGAAGCGTCTGCATATAAATCTCGCTGATCAGGGCTGATGGATTGTTT
GTCAATACAGACAGCCATATTTAAAGGTCTATGAGACATTTAGGACCAAT
TAGCCGACCGCATGAACCATCCAGTGTGTGTGGAGATTAGACACTGCCTC
AAAACAGAATATGCGATCCAATTTAGGCCGTATTTAAGTTAAAGACGACG
GAGCATACATGTACCCCGGTAAACCTTGGAACGACGAGCTCCACTTCCCC
AACCACATGATCATGACAATGAGTACCGAGCCCATCGCTCCTCTCTCTCT
CTCTTTTGCCCCAAATTTAGATGTTCCGCAAGTTCAGACAATGGATTTGG
CTGCATTGCGGAGATGATGATAAATCACGATATAATGCGTGCCGCTTGGG
TTGGTGTTAAAGTTTCAGTTCATTGAAGTCGTGTTTAGATCCGTGGAGGA
TACTTTTGCGTAGCTCCGTAAAAAAGCGTCCACCCTATCGTTTACCCGAT
GCAAAAAGTACGACTCCACAACGCTACGGAGTAAACAGGACTATTAGCTG
CCTGCCCCGATTGTGCTTCCCATGTTCCCATGGCAATCCAAGCGGGCAAT
TACTCTGATACTTTCAATTTGAACCCCAATTGCCTCGACAGTGCAGCGAG
TGTTCGTTCAGGGCGACAACTTCCCAGGGCAGCAGAGCTTTGTTCAGCGA
GGACAGTATTAGGGGATAAATGTTACTAATCACCCTTGGCCAGGTGGTGT
GGCGAGATAAATGTGCTAATTGACCCCCCTCAACTCGTTGCAGTACATGG
AGGCCTCCGTGGAGGAGCTGGAAACCAAAGAGGGTCTAGTGGTCAACGAG
GCCACCAAGATCCAGCAATTCTACCACCTACTCACCTCATCCATCGAGGT
CATCCGGAAGTTCTGCGATCGCATCCCTGGGATCAACGACATCTTGGCCT
CGGACCGGGAGCTCCTGTTCCAATCCGCCTGCTTGGAACTCTTCGCCCTT
CGCTTGGCTTACCGGTAAGACCGAAATCTACCTCGCCTCCAGTCCACCCA
TTCGCTCTCACCTTCGCACGTCGTGAAGTCCCCGTGATGGCCCAAAATGG
TCTCATGCTCGAGAGAAATGCCAAACAAGGCTTTGAATTATGCCAGACTC
TATCATCTGCGCAGGACCGTTGAGCGAGATCACGAAATTTCGCTCAATTT
TGACAGGTTCAAGTGGGAAAAATCGTACAAGCATGAGGAGTGGGGATAGT
TGGATGCCTGACTGGGGAGATGGATAGATGGTGGATGCTTGGCTGGATCA
GGAGACTGCTGACTGCCGGCTAAATGGCCAAGGTTTCGCAAAAAAGTGTC
TCAATTCTCCGAAACAACATGATCATCCATCCAGGTGACGACGCGTTGAC
TCCACCATTAGGCTTCTTCAAATCTATTTTCGAGCCCACATCCAATAATA
ATAGCGACACGCCACCATCATGAATGGGAACGTATCCGATATCCCCCCCG
TTAGACTCGGTATTACACGGGAGCAGCCTTTTTTTTGGGGGGGGGGGCGG
CTACTAACTTCCAGTACATTTCTCCACCTCTTCAATGCCTGACTAAACGT
TTTTCTGCTTTGAGAAGATGGCAATTCAGGTTGGGAATTAAATTGATGAC
CAAAGTCAAGAGTAAAACACTGTTACGAGCACTGCACGGCGAGAGCTGAA
CTCCATTTTTGGGGAGCGGCGTAGGTACGTAAGAGTTGGAGTACCATTAA
GTGAAGTTTTATTCGAGTCAGCCGTGTTTTGAGCGAGTGGGATCACTTCA
ACCATTGTGCTGTAGTGGTTAGAGTAAATTGCCAATCTGTTGTGTTCTCG
AATTATGCCAGCCAGTGACCAGGGTGGCGGATTGCTCAATCACCTCTTAC
ATTGCATCAGCAAATTGGCTCACACAAAACCAGATTCAGCAATCTGAGAG
TATTCTGCAGTGTGCCGCCCTGACGGCTTAATTTGAAGCTCATATCTTGA
AGCTTCCATAATGGTTCTTGGGCCAAAATTTCGATAGCCTTATTTCCAAG
CAACAGTATGGTTTTCCCATTCCAAATTTGGATTTTGAGTGCATGCGAGA
AAAAGCTGCCTTCGGTGAATCACTAATTGTAAGGAAATACATTCTGTCAG
CTTGACCCTGTGTATTGACACACAGAGGACGCAGCTCCTCGTCCAAGTGA
TGGACCGTGTCATCCATTATTATTCACTTCCTCGGTCTGCATTGCATTGA
CTATTCAGTATTAATTACCTAATCTATCAAGTGAATAGAGGCCTACTACA
TCCCTCCCCTTGACGGCCCATCCACTAGAAGAATGTAGGGACGATTACCT
ACTTTCTGGGCTGGCTCTAAGGCGAGAGGAGGAGGTCTTTTTCCGTTTCA
CAGAGCGATTAGCGAAATTAGTTCAGGATCTATTCAAAAATTGACCCGCG
AGTCGACCAGAAACTATTTATCTCCCCGTCACTCCGCGTTAAAAGCCCCA
GCCCGAATTTCCTGTGACCCATTACCTGGCTGGCCTATGAGTCTCAATCA
GGCTCAATTTAAAAGCAAGAGGGGGGTTCCATTCCATGGGCGTAAGATTG
GAAAATCGAGGACAACCATTTTCAAGACTCGGCAAGGATATTGAAGTCTT
CCGCACTCTCTGCAGTAAACCTAGTCAGATTCGTGCCATTTTTAGGCACT
TGGATCGTTGCCATGATTCATAGAAATATCGATATTGATCATCTAAAAAA
ACCATGGAGATATAATTGATTCATCCATTCCGATTTTAGGACTTCAGTTT
GCAATGGGGTTTTATTTCAGAAACACAATTAGCATCTCACATAATGCACA
CTCAAAAATAAAATAGCGACGGATTCGACGTGATAATCTATAGAACGACG
ATAAATGAAAACATGCCAAATCGTAACGAGCAATGATCAATGGAAAACTG
GTCGCCACAAATACACAAGGCAAAAAAATTCTTCGGTGACTAGTTACTTT
CTTTCCAAAGTATTAATAGCTACTATACTGTACGGCTTACAATGAACTAT
GAGCTCCCATCGGGTTACACTAGCGACACTTTTGAGTGCGATGGCTTCGG
GATGTGAACATGATAGCATAACGCCAGGAAGTCTGGCAAGTTCGTGACCT
CAAGCCTTTATCAATAAAATGTGTGGTTGTTCAATTGCAGGATTCAACCA
GACTCGGACCAGTTCACGTTCTGCCATGGCTTGGTTCTGCATCGGAATCA
GTGCCAGCACAGTTTTGGCGATTGGTTGGGGTCCATAATGGAGTTCTCCC
GAACCTTACACGCCATGGATTTGGATATTCAGGCCTTTGCTTGCCTCTGC
GCCCTGACCCTAGTCACAGGTAAGACGATGTCCGATCATGATCCCCATCC
ATCCATGTTAGTTCCGGAATTAGACATGTTTCGTTTTGAATGCAATCGCC
TCAGGCACATATTACGGAAAATCACTGGACAAGAAGAGTCTGGAGGTCAG
CTGTTTTCCATTTGCCAAGGGGGACAAGTTTGTTTGGGAAAAATGCGACG
CATGGGTGTTAAAAATAGTACCATGGAGATGCTATAACTCTAAAATTGTC
CAATACCTCCCCATGATCTGGCAGATTTTGAGCTATGTATACTGTACTAT
TGTAGATATTAACTTTAAATATTCTGACTAGTCCTATCGTGAACACTGTT
GCCAGGACAATAGTAGATTAAATGCGTTCATAAAGATATCCTCAAGATCA
TCCTATCAATATCCAAAGATTCAATCCTAACAATTGGGAGTTATGTACGA
GGCTTAAAGTAGTCCGTCTTTGCCAGGGCAACCCTCAGAAGTAGTTCCAA
GTAAAGGCCCTTCGCATCCTGGATCTTGAAGCGTTTCCAGTCCAGATGAT
GCAGTAGTCTATGCCCCGGGGTAATGCAATGACCCTGCATTGGGAGCGAC
CAGACGTTTGGCCAGCCAAATGATTGTTCGTCATTGACGAGGGGTAGAAA
CTCTGCCTGGGAAGACTCAGGTGGAGGAAGGAGGGCGGAGGAGGAAATAT
CAGGCTTAGATTCCTCGTTTGCGGTTTTACCCTATGGCTTACGAGCTCGT
GAGACATATATTTGCCTTGGTTCTGGTTCACAGAGTTAAACATATGGATG
TGACAATCATCCGATACATTATTTTAGCCCCGGTTTTTTTATGTTCTATC
CTCTCGGGGACATGAATCAGACATGACCATGCTGAGGGCTGCCAATGTAT
CCCTTGAAATTCCCCAATCTCCTCTACGCCCAAGTGTCTGTGATGTGAAT
TAGCCGCCATTTCAACCCATCGACTGAGGTTGACAATTGGAGGTTGAGAC
AAGTAGTACTCCTGGAATTGAACGAACGCACACGATATACACTCGTGGAA
CTGTGTATTTGCTCGGTCTGACAGAATGTGTTTCGAACTGATCTCTTTGG
TTTAAAATGTATCCGGGTTGGGGATCTAAGAGTGAACCAGAACCGCTGTC
AACAAGATCCACGAGAGGGATTTCCGCATCTTAAATTTAGAAGGAAAACT
AGTTCGAGTTGGGTTTCTTGGAACACTAGACCGCGAGGCATCATTATCAA
ATTGGAGTAATGGAAATCAGTAGACGCTCTGAGGCTTGTGATGCAACAAA
ACCAACTTTTTTGAATTGAGACCGTAACCGAAATTTCAGTTGCGTTCAAT
TTCGATGAACGTCATTGCTGAATCGGTGCAGATGTAAAAACTGGTTTAGT
GCAGACTGCAGGAGACGTGTTAGCGCGTTCGCACAGAAATTTTGATCGTT
ATTTTGCGTTTAATGCAACCTAGTGTTTAATTCAATTGCAATTTCGGCAA
AAGTGACGCTCTTTTAGCAAAAGTTGTCAGTATTAAGCGACGGCATTGAA
AGAAAAAAAGCTCGTCCTGTAGAAACCCTCGGCGGCAGAAGGAAATGACC
AGGCATGGATAATCTCTAGGTCAGGCACATTTTTGCCTGCAGCGGCATTT
CATTTTAGGGGAGCACCAGTCGATTAATCATGTATTAGCTGAGACAAGTT
TCGGAGCATCCCTATTTGAGACACTTGAAAATTTTTCCGCTCCCCCGAGG
GCACCCCATTGGCGCCCGCATCCGCGCCGAGCCTCAAACCTCACCGCCTC
GTTCTTTCACATTCCAGATCGTCACGGCCTCTCTGATCCGAAGCGCGTGG
AAAATCTCCAATCCAAAGTGATCAATTCGCTCAAAGACCACGTGACCTAC
AATCCCGACGCTCAGAAGAAGCAGCAGTACTTCTCCCGGATCCTGGAGCG
CCTCACGCCCCTGAGGTCGCTGAGTGTCCAGGGGCTCCAGCGGATCTTCT
ATCTCAAAATGGAGGACACAGTCCCGGTTCCAGCTGTCATCGAGAAGATG
TTTGCCTCCAGCATCCCATTC
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