maker-scaffold85_size395806-snap-gene-2.29-mRNA-1, maker-scaffold85_size395806-snap-gene-2.29-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold85_size395806-snap-gene-2.29-mRNA-1
Unique Namemaker-scaffold85_size395806-snap-gene-2.29-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold85_size395806supercontigscaffold85_size395806:253914..258937 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sorting nexin-27maker-scaffold85_size395806-snap-gene-2.29Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1699maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1699Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1700maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1700Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1701maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1701Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1702maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1702Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1703maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1703Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1704maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1704Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1705maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1705Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1706maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1706Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1707maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1707Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1708maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1708Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1709maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1709Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1710maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:exon:1710Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:three_prime_utrmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013653Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013654Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013655Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013656Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013657Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013658Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013659Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013660Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cdsmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:cds-2013661Tigriopus kingsejongensisexon
maker-scaffold85_size395806-snap-gene-2.29-mRNA-1:five_prime_utrmaker-scaffold85_size395806-snap-gene-2.29-mRNA-1:five_prime_utrTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2013663auto2013663Tigriopus kingsejongensispolypeptide
Tk03922Tk03922Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03922

>Tk03922 ID=Tk03922|Name=Tk03922|organism=Tigriopus kingsejongensis|type=polypeptide|length=578bp
MLSAPAEMPHPFRSHPLDPPRLPPAAASPPGSPRPSPPTTLRTSPPLSQP
QPHSRPAQLRLLEPHVVVIHKTETGFGFNVRGQVSEGGTLKSINGELYAP
LQHVSAVLEGGAAQMAGVFKGDRILEVNHVTVEGSTHRQVVELIKSCGDS
LTLTVISVTQEEADRLEPADDVGNFPNIDYSEKRSLPISIPDYRFIDHDG
ERFVVFNIYMAGRQLCSRRYSEFVILHNNLKREFLGFNFPRLPGKWPFVL
SEQQLDTRRRGLEQYVERVCAIRVIAESELMHEFLTETEDEIGSCPLVDL
KVLLPTKELVTVQVRRNSSSADVYRLVAAAVGIRPDNQDFFCLYEIVEHN
FERKVQPNEYPHSLYIANYSTASATCLIVKRWLFDLETEKPLYSDPVSLE
FLFQHAIESVNRGHIKTEDRLYQLKALQESNKKVEYLSLVHSMEGYGSVV
FPHCSCDSRKDGHVIPIITFDGFKLQACKEDGTEENQVIEFMWSSIMQYD
LDDEAMMFCFQYQRQNKAPRWVKIFSNHYVFMYECFERIQEEQQWRHKIL
GPLKPNQASESVENDQTEDEESTKGVED
back to top

mRNA from alignment at scaffold85_size395806:253914..258937-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold85_size395806-snap-gene-2.29-mRNA-1 ID=maker-scaffold85_size395806-snap-gene-2.29-mRNA-1|Name=maker-scaffold85_size395806-snap-gene-2.29-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5024bp|location=Sequence derived from alignment at scaffold85_size395806:253914..258937- (Tigriopus kingsejongensis)
CTCCTATAGCTTCAAGAGACACATCCATATCGGGGCGAACTCGAAACTTC
AATATTTTCAATATCCGGTCCAGTCTGGCCATTCGAGCGCCAACTCGGCC
AACCTGGCCAGCCAGCAGCTGAGGTCGAAAGCCACTCGAAGGCTACGACA
ATAAGACATACGAGATAAACCTCCTCCCGCTCGTCGTTCCACCCCTCGGT
CACCCTCGACCGCCCACTCGGACGGCCTCGTCGGGAATCGAAGTGCGTGT
CCGGAGGATGAGGCAGGGCCCCGCCTCCAGTAAGCCCGCCCTACCCCGCC
CAGCTCGAGCCTCGACCCACGTTCAACCCACGTTCAACCTCGTTTCAGGT
GTCTGAAAGCCCACTGAGCCACCAACATGCTATCGGCGCCCGCTGAAATG
CCCCACCCATTTCGGAGCCACCCGCTGGATCCGCCCCGTCTGCCGCCCGC
CGCGGCCTCACCGCCGGGCTCACCCCGCCCCTCTCCGCCCACGACGCTGC
GCACCAGCCCGCCCCTCAGTCAGCCACAGCCGCACAGCCGACCCGCTCAG
CTGCGGCTCTTGGAGCCGCATGTGGTCGTCATTCACAAGACCGAAACGGG
TATGCGCTCGCTGAGCGGAAAGCGGGGATTCACCGGGTCCGATGATGACC
ATGGCGCCTTATTGATGGCCTGTTTCCCCCCTGGGTAGTACCCGAGGGGG
GTGCCTTCTTCATTGGGTCGGACTGACGGCTCAGCCAGGGTGGGCGTGCC
TCGGTTAGAGAGATGCGGGGCTGGGAGGATGAGGCCTGGAAAACCCGGGC
CAGCTGGAAAAGGGGCGTTGAGAGCTGGATTGGGGTTGGGTTATCCGGCC
TGCTAGACTAGCCTGGGTCGCCTCTGCGTGATCAACCGATTCTAGATGGA
CCCGCCTGACAGCGTCCAGTTCACATGTTGGGTTCGTTTTCGACCCAGAT
TATTGTACTTGACCATGGGCGACCGCTTGTAGCTCTATCCACGGGTGGGG
CCCACACCTACGTAGTTTCGTAGTGCCCCGGGCGGATGAGCCCGGACGCC
ACACGGGCTGAAATATACATAGACCCGCCCCACCACCTACTTTGACCAAC
GCTGTTTGAGGGGTATTTGCCCATCCGTTATCATGGGGTTAGCTCGTTGG
ACCCAGCGGTGATTATCGGTGATAGTATGTAGGTGCCCGGGAAGCTCCCA
TGCCAATGGCCCATGGGCTTCCGGTAACTCGACTTCGATGGGGGGATCCA
ATCGGGGCCGGTGGGATTAATCTCACTGCTGGCGGGCCGAGTGTCGTGAG
TCAGGACTATTTGCCCATCATACATCTCAGAGGCCATAGCCTATCCAGGC
CATAGCCTATCCAGGCCATAGCCTATCCAGGCCATAGCCTATCCAGGCCA
TATCAGGGGGGCTGTCGAGCGTGTCTCATGTCCCATCGCTCGGCTGGCTG
ATCCGTTGTGGGCTGACTCACCTCTGGTTTTCCCCTTGATGGCCTTCAGG
CTTTGGTTTCAATGTCAGAGGCCAAGTGAGCGAAGGTGGCACCCTCAAGT
CCATCAATGGCGAGCTCTACGCCCCTCTGCAGCATGTATCAGCCGTTTTG
GAGGGTGGCGCGGCTCAGATGGCGGGCGTCTTCAAGGGCGACCGCATCCT
CGAAGTCAACCACGTGACGGTTGAGGGCTCGACCCACCGACAAGTGGTGG
AGCTGATCAAATCCTGTGGCGATTCGCTCACTCTGACTGTGATATCGGTG
ACCCAAGAGGAGGCGGATCGGCTGGAGCCCGCAGGTGAGAAAAGCCTGAC
CCACTGGATAGGATTGTGGTCCGCTCATGACTACGCTTACTTTTTTCCCC
GGCCTAGATGATGTTGGAAACTTTCCCAATATTGACTATTCCGAGAAGCG
ATCTCTGCCTATTAGCATCCCCGACTACAGATTCATTGATCATGACGGTG
AACGATTTGTGGTGAGTTCGGATCAACGAGATGCCCTCACCTCAGACCCT
AACCTTTTTATGATTTTTATGATGTATTCTCTGACAGGTCTTCAATATCT
ACATGGCTGGCCGTCAGCTTTGTTCAAGGCGCTACAGCGAGTTTGTCATC
CTCCACAATAATTTGAAACGCGAGTTCCTCGGATTCAATTTTCCGCGTCT
CCCTGGAAAATGGCCATTTGTGTAAGTTCCGACACACGACGCAAACTATA
CTTGGGAAAACTTAAACCCAGACCTTGCTTGCCCTTTCTAGCCTGAGCGA
GCAGCAATTGGACACGCGACGTCGGGGCTTGGAACAATATGTGGAACGAG
TTTGTGCCATCCGAGTCATTGCTGAGTCAGAGCTGATGCATGAATTCCTC
ACCGAAACCGAGGATGAAATCGTAAGTCCCTCTCCTGTTTATGCCCTTTC
GGTGGAATAAGGAGAGCTTTAAAAAACTGTCTGAAAGCTGATAATTCGTA
CGTTATTTCAAGACATTGGCAGCCAGGGTGGACTTTAAATGATCGATTTA
ATTTCACAAAATGTTCGCACTAAATAATTAAAAATGAAGTTTAATGGAAG
TAATTCAAAAGAGGTGTGCCAATGGCAAAGAACCCAAATGATTGTAATGA
AACTGATGGATAGTGTGGCGGGTGTATGTTCTTGACATCCATTTGGCTGG
CAGGTCGTCGCTGGCGTGTGTGTCTATATTTATCCGCCCATTGAACAAAC
GGACAGTTTATTCCAATGTTGCAAGTGCACTTCTCAAATTCATCTTTAAA
GGCATAGGTTTGCCACTAGTTGTTCTAAGGGGCGGGATGAAAGCAATTGC
AATAGCCATCCTTGGTGCACGGACGGGAAGGAGATCGGAAATATTGAAGG
CTATTTCTTTCCATAGGGAAGCTGTCCATTGGTTGACCTCAAGGTTCTCC
TGCCCACCAAGGAATTGGTGACTGTTCAAGTGAGGAGAAATTCCTCATCA
GCTGACGTCTATCGACTGGTGGCCGCGGCCGTAGGAATTCGGCCCGACAA
CCAGGACTTCTTTTGCCTCTATGAGATTGTAGAGCATAACTTCGGTGAGT
CGACAAATGTGTGGCTTCTTTTGTTGCCGCCTTATGAAGACAATCTTTGT
TCCTTTCAGAAAGAAAAGTGCAACCGAATGAGTACCCGCACTCGCTGTAC
ATAGCAAATTACAGCACGGCTTCAGCCACGTGTCTCATTGTCAAGCGATG
GCTCTTCGACCTGGAAACAGAAAAGCCACTCTATAGCGACCCAGTTAGCT
TAGAGTTCTTATTTCAACATGTGAGTGACAGTGTAATTTTCGCTTTTAAT
AGCAGCTTTGACATATGTGATTTTCTCATAGGCGATTGAGTCTGTCAATC
GAGGCCATATCAAAACCGAGGACCGACTCTACCAGCTGAAGGCTTTGCAA
GAGTCCAACAAGAAAGTCGAGGTTGGACTAATGTCACATGCCAACCTGTT
GACATATTATGCTCAAAATATGACTGTTTGATGAAATATGAAAATTTTCC
ATTTCAGTATCTCAGCCTCGTCCATAGCATGGAGGGTTACGGAAGTGTGG
TTTTCCCACATTGCTCGTGTGACTCCAGAAAAGATGGCCATGTCATTCCC
ATCATCACCTTTGATGGTTTCAAGCTACAAGCCTGCAAAGAAGATGGAAC
TGAAGAGGTGAGTTTTGAGTTCAAAGGGCAACCGCATACCTTGAAGGAAC
TGCCCCGTTTTTTCCTCCCATAACACCCTCTGAGTCATCCATTGCCATGT
ATTCCAGACGTTGCCGGGTTATTTTTGGTCAAAGTAGAGCGTTGAACTTA
TTTCTACGACTTAATAGGTCAAACTACAAGTGCACTTGGTGTGAGTCATA
TGGCGGATGTACTGGATGCTGCTTTTTTAATGACATATTAAAAGGTTGGG
AATAAAGCTCTGATCTTCTATGCTTTTAGAATCAGGTGATCGAGTTCATG
TGGAGCAGTATCATGCAATATGACTTGGATGACGAGGCCATGATGTTTTG
TTTCCAATACCAGAGGCAGAATAAGGCACCCCGATGGGTCAAAATATTCT
CGAATCACGTACGTACTTTCAGCTTGCACGCTTCGAACACAAATGTGTCC
GTCTTAATGGGTCGAAATCATATATATGTACCCCCGGGGATGCTTGACTC
TTTCACTGAAAATCACTGTGGAAAGAATCATGTGGGACACTTGCTCGGAC
GGTTATTCCTATTATCTTGCCAATAAAAAGACCCTAATGGCAGGAGAGTT
TCTCCCAATACGTGGGAAGCTGTGAAGCGTTGCCAAGTGTCCTAGATGAT
ATAGCGAGCCGTTTCTTTTCCAGTACGTGTTCATGTACGAGTGTTTCGAG
CGAATTCAAGAGGAGCAGCAATGGCGACATAAGATTCTAGGCCCACTCAA
GCCCAACCAGGCCTCAGAGAGCGTGGAGAACGACCAGACCGAAGATGAAG
AGTCCACCAAGGGAGTCGAAGATTGAGATACTTGCATTTACCTAATGAAA
CTCACGTTCATCCCACTTGTTTACCTAGAAGTGCTTAGACCTTGGTTCTT
GCTCAAAAGCTTCAGCCTCCCCTACTACTATTAGCATTACTTATTGTACT
TAACGGACAATATTACTTTTGATTGAAAGAATTGATGAATTCATCGAGAA
ACTACCAGACCTTTCCTCCCCAAAGATACCACCCAAGCAAACTGCCCAGC
AATCTGTTACCCTCCTCATTGGTTGAGGAATTAGGATGGTACCGAAAATA
TTGAAATTGTTTGTCAAATCCACCTGATTCATGTATTATGTGATATTGAT
CAGAGCTTAAAGAAGACATGCGTTACCGTAGAGAAATCAATATATCTTGA
TGAATGTTAGACAAGTGAATTTTGATTTGTTCCATCATGCTTCCAAAACC
ACCCCCCAACACTACGATTGGAAGTAGAGATTATATAACACACATATTGC
CATATTCCACACCGTAGTAGTTTCTCGAGAGTTAACTGTCCAATAAATTC
ATTCTGACACGCTCTTGACTCCTA
back to top
Add to Basket