maker-scaffold865_size87005-snap-gene-0.17-mRNA-1, maker-scaffold865_size87005-snap-gene-0.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold865_size87005-snap-gene-0.17-mRNA-1
Unique Namemaker-scaffold865_size87005-snap-gene-0.17-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold865_size87005supercontigscaffold865_size87005:12576..13863 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
lim homeobox protein lhx1-likemaker-scaffold865_size87005-snap-gene-0.17Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:571maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:571Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:572maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:572Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:573maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:exon:573Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cds-1960727Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cds-1960731Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cds-1960742Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cds-1960743Tigriopus kingsejongensisexon
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cdsmaker-scaffold865_size87005-snap-gene-0.17-mRNA-1:cds-1960744Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1960741auto1960741Tigriopus kingsejongensispolypeptide
polypeptide-auto1960745auto1960745Tigriopus kingsejongensispolypeptide
Tk05472Tk05472Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05472

>Tk05472 ID=Tk05472|Name=Tk05472|organism=Tigriopus kingsejongensis|type=polypeptide|length=339bp
LPTPGGHMMDPLHSPYPPLPHIKMETNNNSLSPEKALFGGGGGPDQLIKP
ELDNEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLK
TAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMV
AGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFPV
PPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNSGGGPDFPG
SEFPLGEMPPPNSNSSPEDDFNSSTGSANSNQNSVTPTGNGSGSNPVGGG
VLNGPNSGGNGNNNGSSNGSFSSPSHNGVGGSGDEQMVW
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mRNA from alignment at scaffold865_size87005:12576..13863-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold865_size87005-snap-gene-0.17-mRNA-1 ID=maker-scaffold865_size87005-snap-gene-0.17-mRNA-1|Name=maker-scaffold865_size87005-snap-gene-0.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1288bp|location=Sequence derived from alignment at scaffold865_size87005:12576..13863- (Tigriopus kingsejongensis)
ATTCTCTCTTCTCGGACGAGGACGAAGAGATCGAGGACCAAGTGCCGATT
CCCGGCATCGGAGATCCATCGACCCACCTCCCGCCCCCTACTCTGCCGAC
CCCGGGTGGACACATGATGGATCCCCTCCATTCACCGTACCCTCCGCTGC
CCCACATCAAAATGGAGACCAACAACAACTCACTCAGTCCGGAGAAGGCC
CTATTTGGTGGAGGTGGAGGACCCGACCAACTCATCAAGCCTGAGCTGGA
CAATGAGGACTCCATGGATGGGGAGGGTCTGGACGGCAAGGGTTGCGAGG
ACAGCGAAAACAAGAGTCCAGATGACTCGGCCGCAGGCAAGCGGCGAGGT
CCAAGGACGACAATTAAAGCCAAACAGCTGGAGGTCCTCAAGACAGCATT
TTCACAAACACCAAAACCCACACGCCACATACGTGAGCAATTGGCCAAGG
AGACGGGACTCAGTATGCGGGTGATACAGGTACGCAGGGCTCCACCTCAC
GCTGAGCCGATAATTGGCGCCTCAAGTCTGCCTCGACCTGAGCAATTACA
GTCGGTGAGCTTGATTTTCTCTCTCGTCCTTCAGGTGTGGTTCCAGAACA
AGCGGAGCAAAGAGCGGAGGATGAAGCAGATGAGCAACAGTATGGTGGCG
GGTCGAGGATTCTTCCCGGGCAAGGGAGGCCGTCGAGGCTTCCCTCTGAT
CGGGGACGACTTTGGGTACTTTCCACACGACAAGCCCTACCACGACTTTG
GGTATCCGCCCAATTTCGTCCCTCCACCTGACGGCTTCTTCCCCGTCCCA
CCGGGTCCCATGGGCTACATGGGTCCGGGTGTCGGGCCCCACATGGACCA
ACCCCTGCCCATGCACGGTGGCCCCATGAACAGTGGACCCATGGGCCCTC
CTCCCTCCATGACCCCAAACTCAGGGGGGGGCCCGGATTTTCCGGGCTCG
GAATTCCCCTTAGGGGAAATGCCGCCCCCCAACAGCAACTCTAGTCCCGA
GGACGACTTCAACTCTAGCACAGGTAAGCCATTCTAGGGGCGAGCGCCTC
AAGTGGTCCCTACTTCCAGCGGCTAATCACCCTTTTTGCTATCTTAGGAT
CGGCAAACTCCAACCAGAACAGTGTGACCCCCACCGGCAATGGGAGTGGT
AGCAACCCTGTGGGAGGTGGCGTCCTCAATGGTCCCAATTCTGGTGGCAA
TGGCAACAACAATGGTAGTAGTAATGGGAGCTTTTCCTCACCTTCCCACA
ACGGCGTCGGGGGCTCCGGGGATGAGCAGATGGTTTGG
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