maker-scaffold90_size386344-snap-gene-1.20-mRNA-1, maker-scaffold90_size386344-snap-gene-1.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold90_size386344-snap-gene-1.20-mRNA-1
Unique Namemaker-scaffold90_size386344-snap-gene-1.20-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold90_size386344supercontigscaffold90_size386344:170023..171428 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
lps-induced tnf-alpha factormaker-scaffold90_size386344-snap-gene-1.20Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:106maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:106Tigriopus kingsejongensisexon
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:107maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:107Tigriopus kingsejongensisexon
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:108maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:exon:108Tigriopus kingsejongensisexon
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:five_prime_utrmaker-scaffold90_size386344-snap-gene-1.20-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:cdsmaker-scaffold90_size386344-snap-gene-1.20-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold90_size386344-snap-gene-1.20-mRNA-1:cdsmaker-scaffold90_size386344-snap-gene-1.20-mRNA-1:cds-2005600Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2005601auto2005601Tigriopus kingsejongensispolypeptide
Tk12043Tk12043Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12043

>Tk12043 ID=Tk12043|Name=Tk12043|organism=Tigriopus kingsejongensis|type=polypeptide|length=150bp
MTSKGSESFGGGFAPPPSSNPNYDASYPPLPPAYEETQSYQSGGHTHTSQ
PPPVGGHGSAAPPMRVVVPVQLGPGSANLECPNCHTQVKSKVSSSAGLGA
WLLSVGCCVFGCIFGCCLIPFCIDSMKVYEHHCPSCNVHLGRFKGSASLS
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mRNA from alignment at scaffold90_size386344:170023..171428+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold90_size386344-snap-gene-1.20-mRNA-1 ID=maker-scaffold90_size386344-snap-gene-1.20-mRNA-1|Name=maker-scaffold90_size386344-snap-gene-1.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1406bp|location=Sequence derived from alignment at scaffold90_size386344:170023..171428+ (Tigriopus kingsejongensis)
CCCGCACAGGCCCGAAGGATCTCCACAACTCTGGAGCTGTCCTGGAAGCT TCCGCTCGATTTGGCACAACTCGCCTGCATATTTGGTTTTGGACGCCAGA AACGTTTTCAGGTTCGGCAGCTCTCAAACTGGGGCTCAAGGGCAGAGTGT GCAGGTTGTTACTGTGCTGCTCTCTACTCTCCGTGAGGCAAACGTAGAAG GTGAATTCAAACACGTCAATCCTGGGAGTTTTGCAGGTCTGCGTAGCTCT TCCCCTGAACACCTTGATAAGCGGAATTGGAAATTCTGATTCACCGCTGC CCTCGTCTGAGAAATTCAATTAACCCTCAAACGTGAGTTACATTCAGCCC AAGACACTCCTCAAGCAAACGCCCTTCAACAACAACTTGTCTATCCCAGT TGTGCCACAGTTACTCCCCAAGCTCTCGCCCAAACAATGACGTCCAAAGG CTCCGAGAGTTTTGGAGGCGGCTTTGCTCCTCCGCCTAGTTCTAATCCCA ATTACGACGCCTCCTACCCGCCTCTCCCTCCGGCCTATGAGGAAACCCAA AGCTATCAAAGTGGTGGTAAGTTGTGAATATTTCAGTTCGATATCGATTG GCTCGGGTGAGCCCTATGTCATAAAGGTGCAAGTGTTCCAACGAATGGGA ACAGCTGAAGGAATATTCTTGGTACCTAGCTCAGCATGGCCGGCTTATTT CCAGGTCACACCCACACGTCCCAGCCCCCACCCGTGGGCGGCCATGGCTC TGCCGCCCCGCCTATGCGTGTGGTGGTGCCTGTGCAGCTTGGTCCTGGAT CGGCCAATCTGGAATGTCCCAATTGTCACACGCAGGTCAAGAGCAAAGTG TCATCAAGTGCTGGCTTGGGAGCCTGGCTCCTCAGTGTGGGATGCTGCGT CTTTGGGTGAGTTCCAATTCGGTTTGACGTCCCCGGATGATCGACCCATC TCAGAGAGGCCGCTTCAATTGGCGGGGAATTTTGGGAACGTCCCACTAAT TTGACTTCTTTCAGGTGCATCTTTGGCTGTTGTTTGATCCCATTTTGCAT TGACTCCATGAAGGTCTATGAGCACCATTGCCCATCTTGCAACGTTCATC TTGGACGCTTCAAAGGCAGCGCCTCCTTGTCGTAAACCTTAGTGCCAAAA ACCCCTTCAAGCAATGATACATTCCGGCTTTGATGTTTGAAATGACTTTT CTCAATGACTGTAAACACAATCTACGTATGCGTTTGCAGCTCTATAAATA CACAAACATGAATACATGCAATGTATGTTCATTCTAAACCTTAACCGAGG GTCCTTCAAGAGTTTTGCACGGAGGAACGTTGTTATCTAATTCCACGGCG AGCCAAATTGTGATCCATGTCATCGTCTAGTGCTTCAGTCTCATGTCTTA ATTGCG
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