maker-scaffold98_size375582-snap-gene-2.34-mRNA-1, maker-scaffold98_size375582-snap-gene-2.34-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold98_size375582-snap-gene-2.34-mRNA-1
Unique Namemaker-scaffold98_size375582-snap-gene-2.34-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold98_size375582supercontigscaffold98_size375582:229589..232703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AGAP007725-PAmaker-scaffold98_size375582-snap-gene-2.34Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1192maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1192Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1193maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1193Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1194maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1194Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1195maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1195Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1196maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1196Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1197maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:exon:1197Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:five_prime_utrmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cds-2012015Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cds-2012016Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cds-2012017Tigriopus kingsejongensisexon
maker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cdsmaker-scaffold98_size375582-snap-gene-2.34-mRNA-1:cds-2012018Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2012019auto2012019Tigriopus kingsejongensispolypeptide
Tk06127Tk06127Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06127

>Tk06127 ID=Tk06127|Name=Tk06127|organism=Tigriopus kingsejongensis|type=polypeptide|length=888bp
LRGAMGPKRPARGGGRPGPPRGSPIRPPPGLDRSRLISETDDDTCSVCLN
KIHVFAVGLCNHPICSECSARMRVLCQQKECPICRTDMPQVFHTNGRERF
ENVMGQPFKMIRQYGVCFEGRDIEHAFLTRLEHRCVECEAQPVFKSLQMF
DHHMRRIHEQFLCDLCCEHLKIFTHERRCYSRTDLATHRRKGDTDNTSHR
GHPKCEYCPNQRFMDKDALFLHLRRDHEYCHFCEADGHQRYYCNYEELRD
HFQADHFLCLQCEDTNEKLTNAFRTELDLQAHRVEKHRDNLSKHALRDTR
MVDLDFNYGGARDRDRRQGGRGGGGAGGGGGGFNRRGREPSPELVDQLDG
PVNPGPYQSPPDFSGESFPTLGGAVSGASARGHSASGSSASRFAQSSGRN
VDWRRNRDPTQEDFPSLPGAPTSRPQSSPITGAYHKQRVPTSNGSAKRNV
DHFPALGGPTRSNPHFSAPDTSSKVYRNVQPPAWAQENSQASSRPGTGAP
KKPAPAPVFENDFPGLSAPVVANGGPKTKKGKNNANKNSAKPQGGASSSA
SNLKAVADLFAPSPPLETTRRADEDPSSMDANWNEVPSGAKPKKPAKTPS
NAIPEKNVIPGMVFEEPSTKAMPIPEKKVPPGMGKPAFKSNNAPVDDFPS
LGPAAKGISANFRPNSASHVTPSYYGAAMTPKPARVSSAKAVLEPVNDEN
AFPSLGPSSRTMTANFRPSRTLTASNGPSWGGPKAPPAQSKKKTGFPPGF
NGKVIPFARYQQPPNFKERNNQLLSTVAKVLGGKSLEFKGFKEISSQYRL
GKVESKSYYDRCLSLVSMEKFLQFFPELLALLPDIDKQQELLSIHMDKNS
EMSIRVVQCQFCRQVMGLQDLEIHESSHAMDSDFPALG
back to top

mRNA from alignment at scaffold98_size375582:229589..232703+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold98_size375582-snap-gene-2.34-mRNA-1 ID=maker-scaffold98_size375582-snap-gene-2.34-mRNA-1|Name=maker-scaffold98_size375582-snap-gene-2.34-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3115bp|location=Sequence derived from alignment at scaffold98_size375582:229589..232703+ (Tigriopus kingsejongensis)
CACCCAGCCGAGATAGCCGAGATAGCCGAGGAGGTCATTGCGTGGTGCCA
TGGGTCCGAAGAGGCCGGCTCGAGGCGGAGGCCGCCCAGGGCCACCCAGG
GGCTCTCCCATCCGACCTCCACCCGGGTTGGATCGGAGCCGACTGATCTC
GGAGACGGACGACGACACTTGCTCGGTGTGTCTCAATAAGATCCACGTGT
TCGCCGTGGGACTGTGTAATCATCCCATTTGCTCGGAATGCTCAGCCCGC
ATGCGGGTGCTGTGCCAACAGAAGGAATGCCCCATTTGCCGCACGGACAT
GCCGCAAGTAAGTGCGCCCACCCGTTCACCCGTTCTCCGCTCCGAGCCAG
GCTCAGCTTTGACCCTGTCTGGTATCTACATAGGTGTTCCACACGAACGG
GCGAGAGCGCTTCGAGAACGTCATGGGCCAGCCCTTCAAGATGATCCGTC
AGTACGGGGTGTGCTTCGAGGGCCGGGATATCGAGCACGCCTTCCTCACC
CGCCTGGAGCATCGGTGTGTCGAGTGTGAGGCGCAACCCGTGTTCAAGTC
CCTCCAAATGTTCGACCATCACATGCGCCGGATTCACGAGCAGTTCCTGT
GCGACCTCTGTTGCGAACATCTCAAGGTAATGACGGACTAGCGGCAGCTC
GCCTACGGCATCGAGCTCATGCCGTATGGCCTGGGGTCTTTCAGATCTTC
ACTCACGAACGGAGGTGCTATTCCCGGACCGATCTGGCCACGCATCGACG
CAAGGGCGACACCGACAACACTTCGCACCGAGGCCATCCGAAATGCGAGT
ACTGCCCCAATCAACGCTTCATGGACAAGGATGCCTTGTTCCTTCACTTG
CGGCGGGATCACGAGTATTGCCATTTCTGCGAGGCTGACGGCCATCAACG
TTACTATTGGTGAGACAGCGGGATGGCCCCCTTGCCCTGACTGAATGCTA
ACGCCTCTCTTCGTCCCTGTAGCAACTACGAAGAACTGCGAGATCACTTT
CAAGCCGATCACTTCCTCTGCCTGCAATGTGAGGACACCAATGAAAAGCT
CACCAATGCTTTCCGCACCGAGCTCGATCTCCAAGGTAAGTTCTAGCGAC
TGGGATAGCGGAAGCCTTGACGGCGGTTGTCATTGCTCCCTTTCCCAGCC
CACAGAGTCGAGAAGCATCGGGATAACTTGTCCAAGCATGCCCTGAGAGA
CACCCGGATGGTGGACTTGGATTTCAACTACGGTGGAGCTCGTGATCGCG
ACCGCCGTCAAGGAGGCCGAGGCGGAGGAGGCGCTGGGGGTGGCGGCGGC
GGTTTCAATCGAAGAGGTCGCGAGCCATCGCCCGAACTGGTTGACCAGCT
TGACGGACCAGTCAATCCAGGACCCTATCAGAGTCCCCCCGACTTCTCGG
GCGAAAGTTTCCCCACCTTGGGTGGCGCTGTGTCGGGCGCCTCGGCCCGT
GGGCACTCGGCGAGTGGCAGTTCGGCGTCACGCTTTGCCCAATCGAGTGG
CAGGAATGTGGATTGGCGCAGGAATCGGGATCCCACGCAGGAGGATTTTC
CCTCCCTACCCGGAGCCCCGACCTCTCGACCGCAATCCAGCCCTATTACA
GGGGCCTACCACAAGCAACGCGTACCTACGTCCAATGGGAGTGCCAAGCG
CAATGTGGATCACTTTCCGGCCCTGGGTGGTCCCACCAGGTCCAATCCAC
ACTTCAGCGCACCTGACACATCCTCAAAAGTGTACCGCAATGTCCAGCCA
CCCGCTTGGGCCCAAGAGAACTCGCAGGCCTCCAGTAGGCCTGGCACGGG
GGCCCCCAAGAAACCGGCTCCTGCCCCAGTGTTTGAGAACGATTTCCCCG
GCTTGAGTGCCCCCGTCGTCGCTAATGGGGGCCCCAAGACAAAGAAAGGC
AAGAATAACGCCAACAAAAATTCTGCCAAGCCCCAAGGCGGAGCGTCCTC
AAGTGCCTCCAATTTAAAGGCCGTGGCCGATCTATTTGCTCCATCGCCTC
CCTTAGAGACAACTCGACGGGCTGATGAGGATCCATCGTCCATGGATGCT
AATTGGAACGAAGTGCCGTCGGGAGCCAAGCCTAAAAAGCCAGCCAAGAC
TCCGTCCAATGCGATTCCGGAGAAGAATGTCATACCCGGAATGGTGTTTG
AAGAGCCGAGCACCAAAGCCATGCCGATTCCCGAAAAGAAAGTCCCCCCA
GGAATGGGAAAACCCGCTTTCAAATCCAACAATGCTCCGGTGGATGACTT
TCCCTCCCTAGGACCCGCGGCCAAGGGTATCAGTGCTAATTTCCGACCCA
ACTCGGCCTCGCACGTGACCCCCTCCTACTACGGCGCGGCCATGACCCCC
AAGCCAGCTCGGGTGAGCTCGGCCAAGGCCGTTTTGGAGCCAGTCAACGA
CGAGAACGCCTTCCCGAGCTTAGGTCCAAGCTCCAGAACTATGACTGCGA
ACTTCCGTCCATCGAGAACCTTGACCGCGAGCAATGGCCCCTCCTGGGGC
GGTCCCAAGGCTCCGCCTGCTCAGAGCAAAAAGAAGACGGGCTTTCCTCC
GGGATTCAATGGGAAAGTAATTCCCTTTGCGCGATATCAACAACCGCCGA
ACTTCAAAGAGCGGAACAATCAGCTCTTGTCGACTGTTGCGAAAGTGCTG
GGCGGAAAGTCTTTGGAATTCAAGGGTTTTAAAGAAATATCAAGCCAATA
TCGGTTAGGCAAGGTCGAGAGCAAGAGCTACTATGATCGATGCCTGTCTC
TAGTCTCGATGGAGAAGTTCCTCCAGTTCTTCCCGGAGCTCCTCGCCCTT
CTACCCGACATTGACAAGCAACAGGTAAGCCGGAGGCTTCTTCATCGTCG
GGCCATCGCTCCCCACTGTAGATTATGATTATCTTTCAGGAATTGCTGAG
CATCCACATGGACAAAAACTCAGAGATGAGCATTCGCGTGGTTCAGTGTC
AGTTTTGCCGACAGGTCATGGGCTTGCAGGATTTGGAAATCCACGAAAGC
TCGCATGCGATGGATTCTGATTTCCCTGCTCTCGGATGATTGTGATGTCC
AAAATACCTGCCTGTTACTTTTATATTTTTGGAACATTGACCAAATATAT
ATGAATTAAAAAAGA
back to top
Add to Basket