snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1, snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1
Unique Namesnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1058_size66152supercontigscaffold1058_size66152:56082..63180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Supervillin partialsnap_masked-scaffold1058_size66152-processed-gene-0.9Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:385snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:385Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:386snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:386Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:387snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:387Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:388snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:388Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:389snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:exon:389Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:three_prime_utrsnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980898Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980900Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980904Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:three_prime_utrsnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:three_prime_utr-1980907Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980908Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980909Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980910Tigriopus kingsejongensisexon
snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1:cds-1980911Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1980906auto1980906Tigriopus kingsejongensispolypeptide
polypeptide-auto1980912auto1980912Tigriopus kingsejongensispolypeptide
Tk06483Tk06483Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06483

>Tk06483 ID=Tk06483|Name=Tk06483|organism=Tigriopus kingsejongensis|type=polypeptide|length=1255bp
LECQNSVWRTQTKDPGLCDQDDSILIGDCDSSPTDDDCPIHSDMDRKSCA
GGIAERMAALQKSGEENWKKKVPRLVDNKNAHPVMDILNSNNAVNLNVCD
KENNQVPGGNESLTLANGRPVSIRDRQDKLQQAGDFTPNRNPIKLLDEEE
SLSEAGVVLRRTAPRPTDDSLLITGEPSRVRPVSIHDRLNKLQVSSQSWQ
GRVGDKDVSKFTVAGKMQSDSHRSKSTIESPNLLLVEGHRDTPRATSFSP
KTPRRVPNEESDLWSSDRVKGTPKPRAFRGLDVDLSQIQASSRSLNNGER
KPVMYIEEQLQSDQGMDEFFASLCLPSLQQSPPLFEDGLRPEVLDEFDFD
SIQPVDSRPLSMPRKATVKANPNRRRTRNPVKLLSARTDLKVLTTQVPIE
LEDSPPASPQVELRRNNGNQKQAHLADEAIAGLAAKEDFSAVQLRKSSKM
DQCPGMVVEHLPYKPLMLLQVKGRRWCQTRLVEPVAQSINSGDAFVLVTR
NKLFNWQGKYANVIEKARSAEIALSICQKHDLGCKAAFKVHTLEQEKLFG
TSKAELDFWSLLGEKSMEDEVTFQPRAAGPPEEDEQFELAINDLNLVWEV
AIYNGYEELIPVDNFWGCTPKHELLNPAKVLVIDYGPEVYLWNGSNAGFE
LRKAGLNLLKKVWDSGFDGAHPLMTESHETRPPWGIMGKVNQNMETVLFK
EKFQDWPDQAKATRVKPIEVKLAKLIDSNLSGEIDVQPFDADLMHSWVIE
DPNLELENSFLGRGRGYYDPSERRKYELETVSLKVHHVNEYNITELADDW
RGQFHSEDTYVVRWTYKVSLTGRDLKGRPSKHAAVGRERCCYFFWQGFDS
KTTEKGASALMTVEMDREEGPQMRVDQGKEPAAFLNLWQGHMVIHKGRRG
QSRHVKAAWRMFILRGECSEEACLVEVPVKAANLRSIASFLLVHPTDGKV
IVWQGSSSPEHTQALAIEAAEHIVHTKPLEMGIPPGQHVRMEIDLEGSEG
STCQSALGLPSHRDFENRLAAPTRTPRLFHMSSVATGHFNVMEALCPFRK
MDVLNTMPFSQDDLYQADQPALFLLDVGSKLWLWQGYWPEVPEDLTADQH
QEENPNSANNNITGSGMIRWHAERRAAMQTAVEYRRLRYGLGSRTPKAEL
VWAGSEPLTFTNLFPFWKDTREAKKLNEEHVKHSDLEMTLAALSKTEYTW
EQLHQSPLPDGVDPAKLERYLSEDEFQSQLGFSKKDFMTFPRWKQIEIRK
EKGLF
back to top

mRNA from alignment at scaffold1058_size66152:56082..63180-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1 ID=snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1|Name=snap_masked-scaffold1058_size66152-processed-gene-0.9-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7099bp|location=Sequence derived from alignment at scaffold1058_size66152:56082..63180- (Tigriopus kingsejongensis)
TGTCAAGAAGTTCTGCCCAGAGTGGTAACCCGGATCAGGGATCCCGGATC
CTCTTGGAGTGTCAGAATTCGGTGTGGAGGACACAGACCAAGGATCCTGG
CCTCTGCGACCAAGATGACTCGATCCTAATTGGTGATTGTGATAGTTCCC
CAACTGACGACGATTGTCCCATCCACTCCGACATGGATCGAAAATCCTGC
GCTGGCGGTATCGCTGAGAGGTACACAGACTACTATGGCCTACTTAACTA
CGGTCTCTGAATACTTCCAAGGGAAAATCAAAGGTGTTCGATGCATCAAA
AAACTATCCTTGGGCCATGAGCAGAGGCCCAGCCGGACTGAATAATGCCT
TTGGTATTCACATTAGCAGGTCAGGAATCGGGTTGCAAATAAGAATCATT
TAACGGAGGGTCAACGAGGTCTTCGAGTGAGAGCAGGATCAAGGATTGAA
CTCGCAGTGAACTTCTGGTGGAACCCAGACTTTTCTTTTCGTGCAACACA
TTAGCTCTGATGATTAGCGTCTTTAGGGTAGCCACGAAACGAACGCCTTC
AGTGAAGTTGAAGGCCAAACCGGATAAACCGAAGACCCTAGTTGTACAGC
TTACTGCTTAGTAAAGCATGTAAAGTAAAGCTTACTGCTTAGTAAAGTAT
GTAAAGTAAAGTTTACTGCTTAGTAAAGCATGTACAGTATAGTTTACTGC
TTAGTAAAGCATGTAAAGTATAGTTTACTGCTTAGTAAAGCTTGTAAATT
AAAGTTTACTGCTTAGTAAAGCATGTAAAGTATAGTTTACTGTTAGTACA
GCAAGTAAAGTAAAGCTTACTGATTAGTAAAGCATGTAACGTAAAGCTTA
CCGCTTTGTAAAGCATGTAACGTAAAGCTTACCGCTTAGTAAAGCATGTA
TCGTAAAGCTTACCGCTTAGTAAACCATGTAACGTAGAGCTTACCGCTTA
GTATAGCATGTGAAGTAAAGCTTACTGCTTAGTAAAGCATGTAAAGTAAA
GCTTACTGCTTAGTAAAGCATGTAACGTAAAGCTTACTGCTTAGTAAAGC
ATGTAACGTAAAGCTTACCGCTTATCAAAGCATATAACGTAAAGCTTACC
GCATAGTAAAGCATGTAAAGTAAAGCTTACTGCTTAGTAAAGCATGTAAA
GGAAAGCTCACTGCTTACTATAGCATGTGAAGTAAATCTTACTGCTAACA
GTAAATTCGGTATGACTGCTTTAAAACATTTAAATCTTTTAAAAGACATT
TTGCGCCTTTAGTTTCCTCAAAAATAGATGCACAGTATGTGTACTGTACC
AATGAACACACCAAGAAATTGATATCAACATTAACGTGAACAAGATCTGA
AATGGGTTTTGGAAAGGTGAACAACTCTAGCAAAAGGCTGTTTTTTTCTC
CCAAGACTGAGAGAGTACCTTAATAACAAACAAAAAAATGTTGGGGAAAA
CACTCGAAACCAACAATCTAAAATTAGATTTAATTGTGTAAGGCCTCTTC
GATTTGGAAAATTGCCAGACTTTCCCCAAACCTAGAAAAGTTGTCCAATT
GTATTGTTTAAAGGTGAACTTTCGGGGGGATGTGAATTGCGTTGTTTTAT
CGCATAAACTCGCAGTGAAGGTGAACATATAGGTGTAACTTTACGCAGGT
TCCTCCGATCGCTGATTATCAACGCTAACGCAGAAAAAAATTAAACACTG
AATCCTGAATTCACACAATATTATTACCTCTTGACAACCCCATCTTATAA
TTTCAGTAAATTTATTGAATGATAATTGTGTACAAAAAAGTAAAGTAAAG
TGTACTAGGTACTATGTTACTAGAGGCTTTCGATGTGGTTAAATTAGAAA
CGGGGATCGGGATCTTTTCTCTCGCTTCACTTGCTTATTTAGTCAGTAAT
ATCGGGGCTGCCAAAAAGTCGGAGAAATGGTAGACAAGAAACGCAAACAA
AAGAATTTGCATCAAGTATTCAAAAAAGCCCCAAACATGAAGACTGTTCC
TAAATGTGTAAGAATGCATGCAATATGCAAATGGTTGTTTTTCCCAGCCC
TAAGAGTAATTACGTATACTGTACGTATAGCATGGGCGTATATACCTATA
TAAGTGTAAGATAGCCATCTCTTTATTGATTCATCCTCCGTAACACAGTC
ACGGACTCGCGGAGAGCCATTGAAGTAGCTTGTGCTGCTAAACCCCATTT
GACATTCCCTGTGTTAAAATGATGGATGAAGATGGACTTGGACAGATTTT
GAGTAATTGGTTAATATCGTTCTTTAGAAATGTTTGGAAATTTCTGACCT
TTGTCACTCGTCCATGATGAGTGCCCCATTTTCCAATCCTTGATCACCCT
CGATCCCCATTATTTTGTGCTCGACCACCTGTTGATGTTCCCATTGAGAT
GTATTGGCCTGTTCTCGAGTTTCCTTTGTAAGGATTATATTGAAACGCGT
CGCAATTCAAGGGTTCCAGATCCAAGCTGACACTTCGAGGAAGATTTATT
TCTCCCAAATGGTTTGGCCTTGGTAAGGTGTATCCAGTATTTGATCATAT
TCACATTCTGACAGAGTTTGAATACACTGTCTGAGTCTCCAATCCAATGG
GTGATAAAACCTTGAAAATTGGGAGGAATGAATGTGATCAAAATTGTTGA
GAAGTTGTGGCTTTGATGTTGTAACACGTTAAGTAAGGTATTTATGATCA
TTGATTTTTTTTAGGATGGCTGCTCTCCAGAAGAGCGGGGAGGAGAATTG
GAAAAAGAAAGTGCCCCGATTGGTGGACAATAAGAATGCCCATCCGGTCA
TGGACATCCTGAATAGCAATAATGCGGTCAATTTGAATGTATGTGACAAG
GAGAACAATCAGGTCCCCGGAGGCAACGAGTCCCTCACACTCGCCAATGG
TCGACCCGTAAGCATCAGAGACCGACAGGACAAGCTTCAGCAAGCTGGGG
ATTTCACGCCCAACCGCAACCCCATCAAGCTCCTGGATGAGGAGGAGAGT
CTGAGTGAGGCTGGTGTGGTCCTCCGCCGAACCGCTCCGAGGCCGACCGA
TGACAGTCTCCTGATCACAGGCGAGCCATCGCGAGTCCGGCCCGTGAGCA
TCCACGATAGGCTGAACAAGCTCCAGGTGTCTTCCCAATCCTGGCAAGGC
CGAGTGGGCGACAAGGATGTGAGCAAGTTCACCGTGGCTGGGAAAATGCA
GAGTGACTCCCACCGATCCAAGTCCACCATCGAATCCCCCAATCTGCTCC
TAGTGGAGGGTCATCGAGACACGCCCAGAGCGACGTCATTCAGTCCAAAG
ACCCCGAGGCGTGTGCCCAATGAAGAGAGCGACCTTTGGTCCAGTGATCG
GGTGAAGGGCACACCTAAGCCCCGGGCCTTCCGAGGCCTCGACGTGGACC
TGTCTCAAATCCAGGCCAGTTCCAGGAGCCTCAATAATGGAGAGAGAAAA
CCAGTCATGTACATAGAGGAACAGCTCCAGAGCGATCAAGGCATGGATGA
GTTCTTTGCCTCTCTGTGTCTCCCCTCCCTTCAGCAGAGTCCGCCCTTAT
TCGAGGATGGACTCCGTCCTGAAGTGCTGGACGAATTCGACTTTGACTCC
ATCCAGCCAGTGGATAGCCGACCACTCTCAATGCCGCGTAAAGCGACTGT
CAAGGCCAACCCCAACCGCAGACGAACGCGAAACCCCGTCAAATTGCTCT
CTGCGCGCACAGACTTGAAGGTGTTGACCACTCAGGTGCCCATAGAATTG
GAAGACTCTCCTCCAGCCTCCCCGCAAGTGGAGCTGAGAAGGAACAACGG
TAATCAAAAGCAAGCTCACCTGGCGGATGAGGCCATTGCGGGACTAGCGG
CCAAAGAGGACTTCTCCGCCGTCCAATTGAGGAAGAGCTCCAAGATGGAC
CAATGTCCAGGGATGGTCGTGGAACACTTGCCTTACAAGCCACTGATGCT
GCTCCAAGTGAAGGGGAGGCGATGGTGCCAAACGCGATTAGTGGAACCCG
TGGCCCAATCCATCAACAGCGGTGATGCCTTTGTTCTGGTAACGCGCAAT
AAGCTGTTCAATTGGCAAGGCAAGTACGCCAATGTGATTGAAAAGGCTCG
ATCGGCGGAGATTGCCTTGAGTATCTGCCAGAAGCATGACTTGGGCTGCA
AGGCGGCCTTCAAAGTGCACACTTTGGAACAAGAGAAGCTCTTTGGAACA
TCCAAAGCCGAGCTGGATTTCTGGTCCCTCTTGGGAGAAAAGTCCATGGA
GGATGAGGTCACCTTCCAACCGAGGGCTGCTGGACCTCCCGAGGAGGATG
AGCAATTTGAGCTGGCCATCAACGACCTCAACCTCGTGTGGGAGGTGGCC
ATCTACAACGGCTACGAAGAGCTTATCCCCGTGGATAACTTCTGGGGCTG
CACGCCCAAGCACGAGCTCTTGAACCCGGCCAAGGTGCTGGTCATCGACT
ACGGGCCCGAAGTGTACCTCTGGAACGGCTCGAATGCGGGCTTTGAGCTC
CGGAAAGCGGGTCTGAACCTCTTGAAGAAGGTGTGGGACAGCGGCTTCGA
TGGGGCCCACCCCTTGATGACTGAGTCGCACGAGACTCGCCCTCCATGGG
GCATCATGGGCAAAGTCAATCAAAATATGGAGACTGTTCTCTTCAAGGAG
AAATTCCAGGATTGGCCTGACCAAGCCAAGGCCACCCGCGTGAAGCCCAT
CGAGGTCAAACTTGCCAAGCTCATCGACAGTAACTTGAGTGGCGAAATCG
ATGTGCAGCCCTTCGATGCCGACCTCATGCACTCCTGGGTCATCGAGGAT
CCCAACCTGGAGTTGGAGAATAGCTTCCTGGGTCGGGGCAGAGGCTATTA
CGATCCAAGTGAGCGTCGGAAATACGAGCTGGAAACCGTCTCCCTGAAGG
TCCACCATGTGAACGAGTACAACATCACAGAGTTGGCCGACGACTGGCGC
GGTCAGTTCCACTCCGAGGACACCTACGTGGTTCGCTGGACCTACAAAGT
GTCCCTCACCGGCCGGGATTTGAAGGGCCGACCCTCGAAACATGCGGCCG
TTGGGCGCGAGCGGTGCTGCTACTTCTTCTGGCAGGGCTTCGACTCCAAG
ACCACGGAGAAGGGCGCCTCTGCTCTCATGACTGTGGAGATGGATCGCGA
GGAGGGACCTCAGATGCGAGTGGATCAAGGCAAGGAGCCAGCAGCCTTCC
TCAACTTGTGGCAAGGTCATATGGTCATCCACAAAGGCCGACGAGGGCAG
AGTCGCCATGTCAAGGCCGCTTGGCGGATGTTCATCCTCCGCGGCGAGTG
CTCCGAAGAGGCCTGCCTCGTCGAAGTGCCCGTTAAGGCCGCCAATCTGA
GGAGCATTGCCTCGTTCCTCTTGGTCCACCCCACCGACGGCAAGGTGATT
GTTTGGCAAGGCTCCTCCTCGCCTGAGCACACCCAAGCCCTGGCCATCGA
AGCGGCCGAGCATATCGTCCATACCAAACCCCTGGAGATGGGGATTCCAC
CCGGTCAACATGTTCGCATGGAGATTGACTTGGAGGGCTCGGAGGGGTCC
ACCTGCCAATCAGCCCTTGGACTACCATCGCACCGTGACTTTGAGAACCG
CCTCGCTGCCCCCACACGGACCCCCAGGCTCTTCCACATGAGCTCGGTGG
CCACTGGTCACTTCAATGTCATGGAGGCTCTCTGCCCGTTCCGGAAGATG
GATGTCCTCAACACGATGCCATTCAGCCAAGACGACCTCTACCAGGCCGA
TCAACCAGGTACGTTCAATAAATGAGCAATCACATAATTCAGCAAGGGCA
ATTGGTTACAATTTGAGCGTGAGATCAAGCCAATTATTAGCCCATCTTGC
ATCTTGACTTGCGTGGCCAATTTGAAATTCAATCGATTTCACACGCAATG
TCTAATGACTTTCATGAGAGAGTGCTTCATAGTAGTTGGTGCGTTGGAAA
CGCACTCGAGATTACTTTACCATCTCCTTCACGTGTGAGTTCATCCCAAA
TGAATTGCTCCGCGGTTTCTGTCGCCCTATGCGTGACGGCACTCAAGTTT
GCCATCTCAATTCCAGCCTTATTCCTCCTGGATGTGGGGAGCAAGTTGTG
GTTGTGGCAAGGCTATTGGCCCGAGGTCCCCGAAGACCTCACCGCCGACC
AGCACCAAGAGGAGAATCCCAACAGTGCTAATAATAACATCACCGGCTCG
GGAATGATCCGTTGGCACGCGGAACGGCGAGCAGCAATGCAAACCGCCGT
GGAATATCGGCGGCTCCGTTACGGGCTGGGCTCGCGGACTCCCAAGGCCG
AGCTGGTTTGGGCGGGATCCGAGCCTTTGACCTTCACCAATCTGTTTCCT
TTCTGGAAGGACACTCGGGAAGCCAAGAAACTCAATGAAGAGGTGAGTGC
GGACAAACTTCTGACCCAACTGTCTCGAGCAGAATACTGAGACAAAGTCC
ACTCTTACTATAGCAGGAATATATTAACAAACATCTAACTCATTTCATCT
CTTTGAAGCATGTGAAACACTCGGATTTGGAGATGACCTTGGCTGCTCTG
AGCAAAACTGAATACACTTGGGAGCAATTGCACCAATCCCCGTTGCCTGA
TGGCGTGGATCCGGCCAAATTGGAACGCTACTTAAGCGAGGACGAGTTCC
AGGTGAGTGCGAACCAGCGAGCCCAGGGCCTGGAACCCCAGCATTCACCT
CCTGTGTGTTTCCCCTTTGCAGAGTCAGCTTGGATTTTCCAAAAAGGATT
TCATGACGTTTCCCCGGTGGAAACAAATTGAGATCCGCAAGGAGAAGGGC
CTCTTCTGATCGTCAACCCTCTGGGCATTCTACTTGGAACGCGCGAGTTC
CCCGCAACCTATGCATTTCTCTCCTTCTCCGTCCCTGGAGCTCTGATCGA
CTCCTCATTCATTATTAAGCTATATTCTGACCAATTTCACTTTGGAAATG
GAGCCCTCCAACTTTTTGGACCAACTCATCCTAACTCTTTCACGCACCCT
GTTTCTACTAGTTGTTTTGTCATACCTGATTCTTGTGTGCCCATTTCTGC
GGAGCAGGATCATCAATCGTCCACCAATAAATTTTAGATGACCATTGTA
back to top
Add to Basket