snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1, snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1
Unique Namesnap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold10_size831480supercontigscaffold10_size831480:35444..39216 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
pre-mrna-splicing atp-dependent rna helicasesnap_masked-scaffold10_size831480-processed-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:529snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:529Tigriopus kingsejongensisexon
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:530snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:530Tigriopus kingsejongensisexon
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:531snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:exon:531Tigriopus kingsejongensisexon
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:three_prime_utrsnap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1:cds-1972743Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1972744auto1972744Tigriopus kingsejongensispolypeptide
Tk01804Tk01804Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01804

>Tk01804 ID=Tk01804|Name=Tk01804|organism=Tigriopus kingsejongensis|type=polypeptide|length=687bp
LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADE
RTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRS
GGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTS
KDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEK
DQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKG
GNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIG
VAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQ
IEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVL
ESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAE
DSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGR
PVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGL
EKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVS
LVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLV
SSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV
back to top

mRNA from alignment at scaffold10_size831480:35444..39216-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold10_size831480-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3773bp|location=Sequence derived from alignment at scaffold10_size831480:35444..39216- (Tigriopus kingsejongensis)
AGCCGCTCGAGCCGCTCAAGGTGGAGGCGGTCAAGAGCGAGCCGCTGTCC
CTGGAGGAGCTCTTGGCCCAGCAGAAGGCCGAGGAGGCGGCCAAGGCCAA
GCCCAAGTTTTTGAGCAAGGAAGAACGCGTGGCCGAGGCCCTGCGCAAGC
GGCAGGCCCACGTCGAGGCCTTGCGCGACCAACAGGCCGACGAGCGCACC
AAGCGCCACCAATTTGACCGCGAAGGTCGCCAGCAACTGCGGGCCATCGA
GCGGGAGCAGCGCGACCCGCGCGAGCGCCAGCGCGACCACTTCCGAGACC
GCTGGCGGGGCAAAGGCGGGGCTGATCGCGGCTCGGATCGCTCGGGGGGC
GGGACCAAAGAGGTGGAAGGGGTGGAGAAGGAGCGGGAGGCCATCAAGGA
GCGCTACTTGGGCGGGCTCAAGCGCAAGAAGCGCATCCGCCGGCTCAATG
AGCGCAAGTTCGTGTTCGACTGGGACGCGGGCGAGGACACGTCCAAGGAC
TACAATCCCATCTACGCCGACAAGCATCAGATCCAGTTCTTCGGACGCGG
CGGCATCGGCGGCGTGGACATCAAGTCCCAGAAGAAGACCCAAGGCCAGT
TCTACGGCGAGATGCTGGAGACGCGACGCACGGACGTGGAAAAGGATCAA
GAGAAGTACGGGCCGGCCCCTGGGCACGCCCGCCTGGCGCACGTGTGGGC
CATGGCACTATGAGGGGGGGGGGTTGTATCGGGTTCTCATTCAGGGGGGA
ACACGGGTGTGGTTAGCGAGTGGGGCTAGACAGTGTGCCCCCTCTGACCA
TCCAGTTCAACTACTACTCGAATGGGTGGCGAACCACACGGGAGCCGGCC
ATGTGGCTCCACCTGAGACTGACCCCAAACCACTAGGGCATGAATGATTA
GAATCATCTGGAGGTCCGTTACTGTGCGTATTCAGGGCAACATGGGCATT
GACGGAGTTCAGAGAATCAATCACATCGGCCATGAACAATTTTGCAATGA
TTGGTCTTCTCGTCTCCGATCAGCATCTTGTACGGCTGGCTCACGTGTCC
TCGGACATTTTCAGCGCATCCCTCGGATCAGCTGCTGGGTAGGGTTCATG
GCATCACCCTCGGAGATTCCTCAAGATTGCTCTGGCGAGAACTTTGAAGA
GCTGGAAGCTTAAAAATCTTGAGTCATTTGATCTCACGATCTAAGATTCC
ATAGTGGTTTCCCATGATTCCGCGGGTATCCCTCCTGAGTGCCTGGCACT
CTATCAGATGCAGCGCAGTTTGATCCTCCTCCAGACCAAGACTACATTGA
GGCGATACGTTTCGCCCATGAGCTAAATGGGCTGCCAAGAGACCCGTGTA
CAGTCCGCATTTGGACTAATGCTCCGAGCTTGCAGCTCGAAAGCATCTCA
TCTGGAGGTCGCACGGAACGAAAAATGTGTCCCAAGACCTCGTGGTTCAG
GCAGCTCGAAAGCTGATAATGTCATCAATGGACGGATTGGCGGTGCGCAT
GACATTTCTACCAATTCTGTCTGGTTTGAGAGTCCATCAACGAGTCACTC
TGAAACCCTACGGAACGGGGTGAAATGTCCCCGCCACTCCTGCCTGTCCA
TGGATGGCATTAACGGCTTTCGAGCTAGCTGAACCTTTCGACACATTTTT
CGTTCTGTGCGACCTCCAGGTGATTCTAGTACTCCATGACAAGGGATACA
GGGACCGTCATTTTTACCTATGGATGGATCAGATACGATCAATGTCGGAT
GACGCGAGGGGTCGACGAAAGCTCGCCGCCTAATCCCATTATCCGAGTTG
GAATTGACTCAAGTGCTCAGACAGTTCCATTGCCCCGGGGGGGGGGGGGG
GGGGGGGGGAGGCAGGGGATTTTCAGCTCCGACTGAGGCTAAACACGCCC
GATTCGATATATTTTGACTCATTGCCCATTGATTGCAGGGAACGCCTGAA
GAAGATGAAGCGCCGGGAGGAGAAGCAAAAATGGGACGATCGCCATTGGT
CCGAGAAGGAGAAGGAAGGCATGACGGAGCGGGATTGGCGCATCTTCCGC
GAGGACTACAATATCTCCATCAAGGGTGGAAATGTGGCTCCGCCCATCCG
CCAGTGGGACGAGGCCAATTTGCCCGACGAGATCCTGGAAATCATCAAGG
GGGTGGGCTACACCGAGCCCACGCCCATTCAGCGGCAAGCTATTCCCATT
GGTTTGCAAAATCGCGACATCATCGGTGTGGCTGAGACCGGTTCGGGTAA
AACCGCCGCCTTTCTCCTGCCTCTCATGGTGTGGATTCAGAGCTTGCCCA
AGATCACCCGCCTCGAGGATGCGGACAAGGGTCCCTACGCCATTATCATG
GCCCCCACCCGCGAATTGGCCCAACAGATTGAGGAGGAGACCAACAAATT
TGGTGCCTCTTTGGGCATCCGAACCGTGGCCGTCATTGGTGGTCTCTCCA
AGGAAGACCAGGGCTTCAAGCTACGCATGGGTTGCGAAATCGTCATTGCC
ACCCCCGGTCGTCTCATTGATGTGCTTGAGAGTCTCTATCTCGTGCTCTC
TCGGTGCACGTACATTGTCCTAGGTAAGAGTCTACCCACCGTATACCTAC
AAACTGGTTTCTCTTCAGGGTTCCCATTCTTTGGGTGCTTGCATAGGGAA
TTATTTACCTCAATGCCCACTTTTTGATGTCAGATCCTCCAACCGTATTC
GTGGGATCAATCGTGGCTCCCCGTCAACGGGAATCCACATTTAGTGCAGA
GCCTTTCTTTTTTGAACGAAAGGCTTGATTTGTTCAATGCATAGAGGTAC
TAGAAATTTTGAGAGTTTACATGTGCGGCAGCGCAGACAGCCAAACCTGG
GCCTGTGTCCAAATGCTTCAGAGAGTTTGATTTTCATTTGATGTTCTCCT
GTTCAGATTTAACCAAGTCGTGTGTCTTCTTTTCAGATGAGGCCGATCGT
ATGATTGACATGGGTTTCGAGCCAGACGTTCAAAAGATCTTGGATCACAT
GCCAGTTACCAACGCCAAGCCGGATTCCGACATTGCCGAAGATTCCACGA
TCTTGGCGGAGAATTTCAAATCCAAGAACAAGTACAGACAAACCGTGATG
TTCACAGCCACAATGCCTCCGTCGGTGGAGCGTTTGGCTCGCACGTATTT
GAGGAGGCCCGCCATCGTCTACATTGGCAGCATCGGTCGACCCGTGGAGC
GTGTGGAACAAGTGGTGTGCTTGATGAAGGAGAACGATAAGCGTAACCGC
CTCATCAAGATTCTCAACGAGGGCATCGAACCGCCCATCATCATTTTCGT
CAATCAGAAGAAGGGTGCAGACGTACTGGCTCGAGGTCTCGAGAAGATGG
GCTTCAACGCGGCCACGCTTCACGGAGGCAAGGGCCAGGAGCAGCGAGAA
CACGCCCTCTCCGGTCTCAAGGCTGGAGACAAGGACATTCTTGTGGCCAC
CGACGTGGCCGGTCGTGGTATCGACATCAAGGATGTCTCCTTGGTGATCA
ACTACGACATGGCCAAGTCCATCGAGTCCTACACCCATAGGATTGGCCGA
ACGGGTCGAGCCGGCAAGAGTGGTAAGGCGATCTCGTTTGTGACCCAGGA
CGACGCCCACTTGTTCTACGACCTCAAGCAGATGTTGGTCAGCTCGCCCG
TCTCGCATTGTCCGCCAGAGCTGTCCAACCATCCCGAGTCGCAAAATAAA
CCCGGATCCGGCGCACCCCAGAAGAAGCGCAAGGACGAGAAGATATTTGT
GTAAATGATAGCGAAATAAACCC
back to top
Add to Basket