snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1, snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold11167_size2062supercontigscaffold11167_size2062:67..1974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
abc transportersnap_masked-scaffold11167_size2062-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1:exon:2snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1:exon:2Tigriopus kingsejongensisexon
snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951353auto1951353Tigriopus kingsejongensispolypeptide
Tk01906Tk01906Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01906

>Tk01906 ID=Tk01906|Name=Tk01906|organism=Tigriopus kingsejongensis|type=polypeptide|length=635bp
MSFGPPAGSPFSGPSASQTAARNGLPFAGVPSELAEKAKAILETEPEHPK
ADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQ
RGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYD
LRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQ
ALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRD
KIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVG
AIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPI
QQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSG
VTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQV
GTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATAD
EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMAR
PRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRI
AVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAHQ
back to top

mRNA from alignment at scaffold11167_size2062:67..1974+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1908bp|location=Sequence derived from alignment at scaffold11167_size2062:67..1974+ (Tigriopus kingsejongensis)
ATGAGCTTCGGTCCTCCAGCCGGTTCACCGTTCTCCGGGCCCTCGGCCTC
GCAGACCGCCGCTCGAAACGGTCTGCCGTTCGCCGGCGTGCCGAGCGAGT
TGGCCGAGAAGGCCAAGGCGATTCTCGAGACCGAACCCGAGCATCCCAAG
GCCGACATCCACTTCGAGCAGTCCGGCGTCGAGACGACCCCGTTCACCCT
CCGCTCGTTCCTCGGCCCGCACCGCAACAAGCTGGTGCTCGTCGCCCTGC
TCGTGGTGATCGAGACACTCTCGCTCCAGGCAGGCCCGCTGCTGACGCAA
CGAGGGATCGACCGGGCCATCGTGCCTCGCGATTCCTCGGCCCTGTGGTG
GATCGGCGTGGCCTACGCCGCGTCGATCCTGGTCAACCTCGTGGCGTCGT
CGATCCGGATCCGATTCGCCAACCGGGTCGGTGAAGGCCTGATGTACGAC
CTCCGGGTCCGAGTCTTCTCACACCTGCAGCGCCAGTCGCTCGACTTCTT
CACCACGTCGAAGGCCGGCGTGTTGATGACCCGGATGACCTCCGACATCG
ACGCACTCACGGTGCTGTTCCAAGACGGGCTCGTCAATCTCGCCGTGCAG
GCCCTGACCCTCGTGGTCATCACGATCGTGATGTTCACGCTCAGCCCCAC
CCTGGCGGCGATCCTGCTGGTCATCGTCGTGCCGGCGATGTTGCTGCTCA
GCGTGTGGTTCAAGCGGGCATCCGAGCGCAACTACGCCCTGGTCCGAGAC
AAGATCGCGCTCGTGCTGTCGGACCTCTCCGAGAGCCTGGCCGGTGTCAG
AGTCATCACGGCGAACAACCGTCGCCGTCACAACAACATCCATCACGCCA
ACGTGGTCAACGGGCACCGCGATGCGAATGTGCGAGCCTCGACCGTCGGT
GCCATCTACGGGCCTGCCAACGAGGCGATCGGCATCATCGGGCAGGCGAT
GCTGCTGCTCATCGGCGGCAACATGGTGCTCGACGGTCAGCTCAGCGTCG
GCGAGCTGTTCGCCTTCCTGCTGTACCTCACCGCCTTCTTCGCCCCCATC
CAGCAGCTGGTGCAGCTGTACAACTCCTATCAGCAGGGGCAGGCTGCCGT
CACCAAGATCCGGGGCCTGTTGGCGACCGAGCCGAGCGTGTTGGAAGCGC
CCGATGCCTACGAGCTGCCCCCGATCGACGGGCGGCTGGAGCTGTCGGGT
GTCACGTTCGGGTACTCCGACGATGAGCCGGTGCTCTTCGACCTCGACCT
GGTGATCGAACCGGGCGAGACCATCGCCGTCGTTGGGCCGACCGGAGCGG
GCAAGTCCACCGTCGCCAAGCTGGTCACCCGGTTCTACGACCCGCAGGTG
GGAACCGTGAAGCTCGACGGCCACGACCTCCGAGCGGTGACCGTCCACTC
GTTGCGCTCCCAGCTCGGTGTGGTGCCCCAGGAACCGTTCCTGTTCAACG
GGACCATCGGCGACAACGTCTCGTTCGCCCGGCCCGATGCCACCGCCGAC
GAGATTCTCGAAGCGTGTGAGGCGGTCGGTCTCACCGACATGTTGAGCCG
TCTGCCCGACGGGGTCGACAGCGTCGTCCACGAGCGTGGCTCGTCGCTCT
CGAGCGGTGAGCGTCAGCTGCTGGCCCTGGCTCGGGCGTTCATGGCCCGA
CCCCGGGTGTTGGTGCTCGACGAAGCGACCTCGAACCTCGACCTGGCGTC
GGAGACCATCATCGAACGAGCCCTCGACGTGGTGCTCGAAGGCCGCACGG
CGATCGTGATCGCCCACCGGTTGGCCACCGCGATGCGAGCCGACCGGATT
GCCGTGATCGACGACGGCCGCCTCATCGAACTCGGCACCCACGACGACCT
GGTCGCAGCCGGCGGCCACTACGCCGCCATGTTCGCCAGCTGGGACGCCC
ACCAGTAG
back to top
Add to Basket