snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1, snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1132_size60346supercontigscaffold1132_size60346:7278..9182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sry-related hmg box c proteinsnap_masked-scaffold1132_size60346-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:exon:1525snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:exon:1525Tigriopus kingsejongensisexon
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:exon:1526snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:exon:1526Tigriopus kingsejongensisexon
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1:cds-1957880Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957881auto1957881Tigriopus kingsejongensispolypeptide
Tk12389Tk12389Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12389

>Tk12389 ID=Tk12389|Name=Tk12389|organism=Tigriopus kingsejongensis|type=polypeptide|length=454bp
MISVLNPYRPMAQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNR
IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPY
IQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRS
SPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKAN
LAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSPSESFYEDHHH
HHQYHPSQFHHHHSHMNASMMLHGVDAVKQNLDFNHFCDSTSISATTTSH
SYTPTTLNTNANQIKMEPISPMKTELKQEPISPHRYDCLYSNNQIKQESN
YFHEPLTPSSMSTDLSSVTSSLDDLDNIADLLPMHGGGDLSLDDISNLVD
IPKSFPEDQKPPECLMDMDFESPFAFTSPEDNDVFSSIDYHDSFVDNSLA
SFIS
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mRNA from alignment at scaffold1132_size60346:7278..9182-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1905bp|location=Sequence derived from alignment at scaffold1132_size60346:7278..9182- (Tigriopus kingsejongensis)
ATGATATCGGTGCTCAACCCTTACCGACCCATGGCACAAATGAAACTCTG
CCACCGATCGAGTGGCACTTTCGGCAGTCTGAGCGTCGATCAGAACTCGA
CCACTCCATACACAGATGCCACTCAGGTAAGGATGCATATCCCCAATGAT
CCAGACAGTTAGTTAGGCAAAGCTCCAAGGTCAGGCCATGCCAATATCGC
ACATGCACCATCACACGCATGGACACGGGCATGTGGGCTCACAAGTGATT
GGATGTGGCTTTGAAACCATCGTTTGTCATGAAAGAATTGTTTGCTCTTT
TTTCTCTCCGCTGTTTACTAGGAGCGAACAAGTTCAAAGTCTTGCGATCC
CATTTATGAGCCCATGCAATGTGGTGCTCCCGGTGAGCAGCACAGACAGA
TGGAGAGATAATCAGCTGTGTGTGCTATATCCCAGCATTGGGATGTATGT
ATATATATTTATAATCGGCTTGTGAGATATTCGGAGGACTTTCGCTGCCG
TCATGTCCAAAAGCCCATTTGTCGTCTTGGTCGCCAGGAGCGATAAAGAG
CCGAGTCATGACTCACAATTAAGCCCGAGTTTGGGTGATGCTTTGGTAGG
ATGAATGTGCAACTCTGAGAGAAGGATTCCAGTAAATAAACCCGGCTTCT
CTCACTCTTTTTGCAGACTAAGAAGCAGCCAGTGAATCGAATCAAACGTC
CCATGAATGCCTTCATGGTTTTCTCACACATCGAGCGCAAGAAGATCATT
GAATTCCAACCGGATATTCACAACGCCGAGATCTCCAAGAACTTGGGCAA
GAAGTGGAAACTGCTCAGCGATGAGGCCAAACAACCCTACATTCAGGAGG
CCGAGAGGCTGCGACTCCTTCACATGAAAGAGTACCCCGACTACAAATAC
CAGCCACGCAAGAAAAACGGTCCGGGCAGCAAAACCAACAGTCCGGTCCA
TCGCTCCCTGGTCGAGAAGAAGAGTCCGGTCAAGCGCTCCTCGCCTATGA
AGCTGAACCGCTCGTTCGGAGGCAACTCTTGGGTGAACAGCTCCAAGGTC
AGATTCAGCACGACCAACGGTCCGCTCACCTGTGTCAACCACGAGCGCCT
CAATCTGAAGTTCACCATCGACTCCAAGTTCAAAGCCAATCTGGCCAAGT
CCAGCGCCAAGCTGGTGCCCGTGTCTGGCTTCGCCGTGGACACCTCCAAG
ACCAGTCCCACGCCCTCACTACCCAATGTGCCTACCACGCCCGACTTGCC
TCACTCGCCATCCGAGTCTTTCTACGAGGATCACCACCATCACCACCAAT
ATCATCCGTCGCAGTTCCATCATCACCACTCGCATATGAACGCGTCCATG
ATGCTCCACGGTGTGGATGCTGTCAAGCAAAACCTCGACTTCAACCACTT
TTGTGATAGTACTTCCATTTCTGCCACCACTACTTCTCATTCTTACACTC
CTACCACTCTCAACACCAACGCCAATCAAATCAAGATGGAACCGATCTCG
CCCATGAAGACAGAACTCAAGCAAGAGCCGATCTCACCCCACCGATATGA
TTGCTTGTACAGCAACAACCAAATCAAGCAGGAGTCCAACTACTTTCACG
AGCCTCTCACGCCCTCGTCCATGAGCACGGATCTGTCCTCGGTGACGAGT
AGTCTGGACGATCTGGACAACATTGCCGACCTCCTCCCCATGCATGGCGG
CGGCGATCTCAGTCTGGATGACATCTCCAATCTGGTGGACATCCCCAAAA
GTTTCCCCGAAGACCAAAAACCTCCAGAGTGTCTCATGGACATGGACTTT
GAGTCCCCTTTCGCTTTCACCTCTCCCGAAGACAACGACGTCTTCTCCTC
CATCGACTACCACGACAGCTTCGTGGACAACTCTTTGGCCAGCTTCATCT
CTTGA
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