snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1, snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1159_size58420supercontigscaffold1159_size58420:42769..47546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
general transcription factor iif subunit 1 isoform x1snap_masked-scaffold1159_size58420-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:325snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:325Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:326snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:326Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:327snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:327Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:328snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:exon:328Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cds-1976014Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cds-1976015Tigriopus kingsejongensisexon
snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1:cds-1976016Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976017auto1976017Tigriopus kingsejongensispolypeptide
Tk06246Tk06246Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06246

>Tk06246 ID=Tk06246|Name=Tk06246|organism=Tigriopus kingsejongensis|type=polypeptide|length=901bp
MDHLEPFCAQAGQEGCATYPVPINCPTTEEELEETLKATLFAVKTCEKFH
EERLTVIQETWGPAAVNVIYVSEKEDPQFDTLRLPGLRNTERGHCNKTMS
IVNYFRAHARERGWQWLVIADDDTILSVGKLASMLRCYDPQDLVAIGQRY
GFRIATGQHGYDYPTGGSSMIFSLPLIEKMADQKSHCRCPSEEHPDDMLL
GACLTNMGISLTHSKRLHQGRPEDYHEKLLAEHDPVSFHKFWQTDPVKTY
RKWFAEWDELPRRIKFNRAHPHQDLLLVSMAEQVQEFTIKLPTRNERKKF
HILKYNASLKIDPTNWSQVRMVRENNKKEHHRGPDEEAPKQGAGSEFGRE
QREEARRKKYGYSSKKYNPDAQPWLMRIGSKKEGRQYRGLRDGGVSDNTT
YYVFTHAQDGSFEAHPVSEWYNFTPRVTYKTLNAEEAEEKFAERGKILNH
FAIMVNKKLRGDQAGGNDEDLDDEGGKKGKAKKGPGGKKEFKISDMDDWV
DSDGGLNSDSEQEKEKSEDEDDAGKKKGRSKDSKKKNRKKDEADSEGNED
SDDGDGEGREVDYMSDESSESDEELQEQANTKGVDQDEGLSKMLDSDESE
EEENKDKEKEGEEDDDPDKAKKKKKKKAKDGEASNEDSDEGKGKGASQGN
SRAGTPGPGDAEDKDNDEKNQRAEKRKALVDSVLDPMESSKKKMRMEQFS
SSQGSSGNVDASIEEDVRRYLARKQMTTTELLKKFKSKKTGLGKDELMQQ
LVEALRKINPQKKKVKGVMYLFLKNIMDSIKTNYGLDDPMIKGIQRNKDL
IQSGHPLEQSEKYYRKNLEKSEMAQLRSLQGLHAPLRLQMERAAVSKVGH
LPCITSRANLLADVLTGRDETIGFDDIYGQPEHCEGLTMPHHAIERHLGT
L
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mRNA from alignment at scaffold1159_size58420:42769..47546+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold1159_size58420-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4778bp|location=Sequence derived from alignment at scaffold1159_size58420:42769..47546+ (Tigriopus kingsejongensis)
ATGGATCATCTGGAGCCCTTCTGCGCCCAGGCGGGCCAAGAGGGCTGCGC
TACTTATCCCGTCCCGATTAACTGTCCGACCACGGAGGAAGAGCTGGAGG
AGACGTTGAAGGCCACTCTGTTCGCCGTGAAGACGTGCGAAAAGTTTCAC
GAGGAACGTCTGACCGTCATTCAGGAGACTTGGGGACCGGCAGCCGTGAA
TGTGATCTACGTCTCGGAGAAGGAGGATCCCCAATTTGATACCCTCAGGT
TGCCCGGCTTGCGCAACACGGAGCGGGGCCACTGCAACAAGACCATGTCC
ATCGTGAACTACTTCCGAGCCCATGCCCGTGAACGAGGCTGGCAGTGGCT
GGTGATCGCAGATGACGACACCATTCTGAGCGTGGGCAAGCTGGCGAGCA
TGCTGCGTTGCTACGATCCCCAAGACCTGGTGGCCATTGGCCAGCGCTAC
GGATTTCGAATTGCCACGGGTCAGCACGGATACGACTATCCGACCGGTGG
ATCCAGCATGATTTTCAGCCTGCCTCTGATCGAGAAAATGGCCGATCAGA
AGAGCCATTGTCGATGCCCAAGTGAGGAGCATCCCGACGACATGTTGCTA
GGGGCTTGCTTGACCAACATGGGCATCTCTCTGACTCATAGCAAGCGTCT
CCATCAGGGCCGACCCGAAGACTACCACGAAAAGCTACTCGCCGAGCACG
ACCCCGTGTCCTTTCACAAATTCTGGCAGACAGATCCCGTCAAGACCTAT
CGGAAATGGTTCGCAGAGTGGGACGAGCTCCCTCGCCGCATCAAATTCAA
TCGTGCTCACCCGCATCAAGATTTGTAATTTAGGAAGTTGATCCGAGGAC
TCCATCTGTGTGCCTTTGGGTTGCTGCGTGACTTGTGATAGTAGAAGAAT
CTCCACCATGTGATTTACCGCATTTCTTGCCCTGTGTGCCATACAAGAGC
TTTACCCTCGCGTTCAAGAATACATTAATATGTAACACCCGGATGATACG
TATATGTGCCTCACTAACATTTGCCACTTTTGAATTTCTAGGCTCTTGGT
CAGCATGGCAGAACAAGTGCAAGAGTTCACCATCAAATTGCCCACTCGTA
ATGAGCGGAAGAAGTTCCACATTCTGAAGTATAATGCCTCCCTCAAAATC
GATCCGACCAATTGGAGTCAGGTGCGTGAACATTCATCCTCCTAAACGTT
TATGCGGCTCCCCGTGTAGTAGCACTCCCTTGACCTCGCGGCTCAATTTG
TTCCCAGGTTCGAATGGTGAGAGAGAATAACAAGAAGGAGCACCACCGTG
GTCCCGATGAGGAAGCTCCCAAGCAAGGAGCCGGTTCTGAGTTCGGACGC
GAACAAAGGGAGGAGGCCCGACGCAAGAAATATGGCTATTCCTCCAAGAA
GTATAACCCGGATGCTCAGCCGTGGCTGATGCGGATTGGGAGTAAAAAGG
AGGGCAGGCAGTATCGGGGACTTCGAGATGGCGGCGTGTCCGACAACACC
ACTTACTACGTATTCACGCACGCGCAAGATGGATCTTTCGAAGCTCATCC
CGTGTCAGAGTGGTACAATTTCACACCCAGGGTGACCTACAAGACGCTGA
ATGCCGAAGAAGCTGAGGAGAAGTTTGCCGAGAGGGGCAAGATCCTCAAT
CATTTTGCTATAATGGTCAACAAAAAGCTTCGTGGAGATCAAGCCGGCGG
GAATGATGAAGACCTTGACGATGAGGGCGGGAAGAAAGGCAAGGCCAAGA
AAGGGCCCGGCGGAAAGAAAGAGTTCAAGATATCGGACATGGACGATTGG
GTGGACTCTGACGGGGGACTGAACAGCGATTCCGAGCAGGAGAAGGAAAA
AAGCGAGGACGAGGATGACGCCGGGAAGAAGAAGGGTCGCAGCAAGGATT
CCAAGAAGAAGAACCGAAAGAAGGACGAGGCCGACTCGGAGGGCAACGAA
GACAGTGACGATGGGGACGGCGAAGGGCGAGAGGTCGACTACATGTCGGA
CGAGAGCTCCGAGAGCGATGAGGAGCTCCAGGAGCAGGCCAATACTAAAG
GTGTGGATCAAGACGAAGGCTTATCCAAGATGCTCGACTCGGATGAGTCC
GAGGAGGAGGAAAACAAAGATAAAGAGAAAGAAGGCGAAGAGGACGATGA
TCCAGACAAGGCCAAAAAGAAGAAAAAGAAAAAGGCCAAAGACGGTGAGG
CCTCCAATGAGGACTCCGACGAAGGCAAGGGCAAGGGGGCCAGTCAAGGC
AATTCCCGTGCCGGCACACCCGGTCCAGGCGATGCCGAGGACAAAGACAA
CGATGAAAAGAATCAACGCGCCGAAAAGCGAAAAGCGCTCGTTGATTCCG
TCCTCGATCCCATGGAGTCCTCGAAAAAGAAGATGCGCATGGAACAATTC
AGCTCGTCGCAGGGATCCTCGGGCAACGTGGACGCCTCGATCGAGGAGGA
CGTCCGTCGATATCTGGCTCGCAAGCAGATGACCACCACGGAGCTGCTCA
AGAAGTTCAAGAGCAAGAAGACTGGCTTGGGCAAGGACGAGCTCATGCAG
CAGTTGGTCGAAGCGCTCCGCAAGATCAACCCTCAAAAGAAGAAAGTGAA
AGGTGTCATGTACCTCTTTCTCAAAAAGTAAACGCAGTAACATTATCCCG
GGGGGTGAATTGAACAATCTGAACATATTTATTGCCCTGAAAAGACCCAT
TTATATCATTGATCCTTCAACGCAATGATCTTGTCAAACAGCTTGAGACA
CTCACTCAAAATTACTAAGCGGCTTCAAGGTTTAGACATGGCTGACAAGA
CCATTGAATTAAGGCCGTGCGATAATCGATTATCGAATTCGACAATTGAA
AAAAGATTTCAATTAGCTTTATTCAATTTTATGTTTGCTCGTTATTCGAT
ACATCGGTCGATATTTTCGACATCATAAGATTAAAAAATGATCCAAACTC
TGGCTGCCAGGTCCCAGTTAGTTCCTGTTTTCCGGATTTTTTTGTCTTTA
TCGTGACTGGTTCCCAGGAATGAAGTGGTGTTTTTCGACCCTTGTAATCC
GATGAACTGGCACAAAATTGACCCAGAAAGTGGCTATATTGTATTAAATT
CACATGATCAATACGTTTTGGGTATGAATATTTGCAAATCCATAAGTTCG
GTGACCGGCCGTAATCGATTTTTTTTCTAATATAAAATAGGTATTTGCTT
CTCCGAAATAGCGCCAAAATGGCCAAGTTAACCAGGAATGCGCTTTTTCA
CTGCAAATCGATTAACAAGATAAAGATAGAAAAGAAAGGCCAAACCCTTT
TCGGATCTGAATTCATTTTCAAAACCGTATGTAGCTTTTCAGAAAACGGC
GGTTTTAGTGGTTCGGATTTCGACCGAAGGATTGGCCAAATCGGCTATCG
ATGCTTCAATAACATTACAAATGCTTGAAGGATGCAGTAAACATATTCAG
GCCAACATCAGTTGAAAGGCACGGACTTTTTTATTCTTGTCCGCAATGTG
GTGAAAATATTTACCATTGTACCTTGTCTATGCATATTATCCACCGCTCC
ATGGTTACAAAAAGCCATTGAGTGACAAAATGGGAGATAGAAGCAATATA
CAGTTTATCGTACAACCCAAATCGTGATCCTGGAGTTATGGAAAACGCAG
TTTCAAGAGTGTCAAGTGTACCAAGACAGAAAAGCTTCCGGTATGCTAAT
CTTTAGAGGGAATATGGATCATTGAACTCGAAAATCGACGTCAAATGAAA
TATCGATGTCGATAATCGACCTGAAGTGAAATAGCGAACTCGATACATCG
ATATCCATTTTCGAGAATATCGCACAGCCTTACATTGAATGCAGTGGGAA
GGGTTGAGCCAATATGAGACGGTCAACTTCAAACCAACTGATTTTCCGAA
TGCATGAACGATTGGGCAGCAGAATTTGACCAAAATACGCGTACGCCATG
GTCTTGTTTACGCCGTTGAGTAAAATATCCTCGCGAGGTAAACTAAAATC
CATGCTGAAGCCTTGAACTGTAACTTTCCCAAAAAGGTGCAAGTTTTGGG
GATGGATTAATCAGGTCCCTTCAAGTTTTAGTGCGTAGCCAGCATGGCCT
TCAGAAGCTATAGATTGTGCATGACATGCATTCCAGGCCCAAGACATGAA
GCAGGGCAGAGTTTAGAGCCTAAGCGTTAGCAGAGATTGTTGCCAGGACT
TGGCTGGGGATCATTGAAGTCGAATAATGCCCAAAGGACTGAATTGCTTG
AAGAATCCAGGATCTGAGGTTGCGAGAGAAATAGTATTCGAGCTCCGAGC
AAGGTATCGTCAGCTGACGTTCAAGCGTTTCGCCGAATCATTCGAGCTGG
AAATTTGGTGAAGTCGACCAATCTTGGAGCTCAAACATCAACTCAGCATC
ATGGACTCGATCAAGACCAATTACGGACTGGACGATCCCATGATCAAGGG
GATCCAGCGGAACAAGGACTTGATCCAGAGCGGCCATCCCTTGGAGCAGT
CGGAGAAATACTACCGCAAGAACCTGGAAAAGTCCGAAATGGCCCAGTTG
AGAAGCCTTCAAGGCCTCCACGCCCCACTCCGCCTGCAAATGGAGAGAGC
CGCCGTGTCCAAGGTGGGCCACCTGCCCTGCATCACCTCCCGCGCCAATC
TGCTGGCCGATGTCCTCACCGGTCGGGACGAGACCATCGGGTTCGACGAC
ATCTACGGCCAGCCCGAGCACTGCGAGGGCTTGACCATGCCCCATCACGC
CATTGAGCGTCATCTGGGAACACTCTGA
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