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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold1216_size55193 | supercontig | scaffold1216_size55193:10420..18389 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:270 | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:270 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:271 | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:271 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:272 | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:exon:272 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds-1960951 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1:cds-1960953 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk10889 >Tk10889 ID=Tk10889|Name=Tk10889|organism=Tigriopus kingsejongensis|type=polypeptide|length=1354bp
MNVSKFFAQFHLGKPLTVLFAKLGYFLGERCQFVFLLSFWSVLSNSFWVY
TTGLPHMRYETNIEKLFIPKDAMAWYERSVLEEFFPMNYQDYYPGHEVKI
DPGLAVLIRPTEGPSILNSAIWADITALDNLVHNVIELNDGIGFKDICVQ
RQGACLKNSILELNPYINEIEGQTFNLTYPKMSNPVTGSDYFLPAHFGGV
QLRPDKNTLLDASSMRLFYIFDGSEQKLNQSKAWEVHASLWLASLKFSHI
HIEMLHSQSLERELVRNIDSAFDYLEITVGLVTLFITFNSMNHKLGLTRL
IVGLLGLLNTVLWTFLAFALTMKLGYDWQAINLASIFLLLGVGLDDTFVM
LASWKETKHLKSIPERLSQTYREAGVSITITSLTNILSFCVGAVVPGFPC
VEIFCVYAGFGLAAIYFGTLTLFGPGLAFLYTIQDDILAKIPRLGTFEAD
WIRRLPSGSELCRRLIGSPLTKGWVQGLILSVWVIYLSISAYGATLVGHG
LEPKNLLRRDSMVYNFFEHVVEDYHEYAYRVQIVILAKMDYSDPEVQLEI
KLALDNFRLSPWMSNVSSIEENWLQVYLESPFSPNEAGGDDFIGNLKKFL
DEFPTLPVVQNVKFDPTGTRIIASRFLLQSSSIKNSVQEQKLIQDLRRVA
QESPLEIVIHNPTFILYDQSNHVVGSTSLSAACCTLAMFLVALLLIPKVF
SSCLIVIAIISILVGMMGSMYLAQINVDVISMINIIISIGFSVDFSAHIT
HHFISSSEPDPNERIMSSLEAFGLPIIQSALSTILGVLPLFFINSYILQS
FATMMTLVICLGALHGLVFLPVGLSVMLRVLSLCHVDTTVDNSTPPMLQM
VNLAFENDASDLAENDETMRDQEDLECDKGSTFYHSDIFACEPFSPEPSS
SEPIDPAHMEPTCPICSKPAGKHSYYGAQTCVSCRGFFRRSVQSNHHSVF
KCLANGNCSIDSGSRRSCKLCRYQKCVQAGMNPSYVLTNQQRKERIVKRY
KSKIVDVQGHPQAHQTTGTMKMKKHAAMVGLFTLEEEQNLLINYRKWTEF
AYIKCLDYFSDHLDQFDMFMRNAYYAEPIPLSITKAMTKLDENIIVSAYF
NEDEVQKLPFNDRMTLITKNFPIVYGLCWGFYSLPEDMNAYMEGLLSFAL
TDTQRNRRYQSLVNSIKDTMAKRRKIISNFRDVIPKESFGNNSEYENFIS
DTDHIGSIVTTNQNLDPILMFLLFNFCLYATEFPEKLEATEMIGACQQKY
LHLAYRYLRFKYPKRSSAKLHETLMITLKARNVYDTMNKSHEGEYLKPFL
TLAYQTMIPLRSLLTASLAKVMVVRGVAEPLAPRRISLVGTLTSMGNPSH
CSLP back to topmRNA from alignment at scaffold1216_size55193:10420..18389+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold1216_size55193-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7970bp|location=Sequence derived from alignment at scaffold1216_size55193:10420..18389+ (Tigriopus kingsejongensis)
ATGAATGTGTCCAAGTTCTTCGCCCAATTTCACCTGGGAAAACCGCTAAC
TGTGTTATTTGCCAAACTTGGCTACTTCCTGGGCGAGCGATGCCAATTTG
TGTTCCTGCTATCCTTTTGGTCGGTATTGAGCAACTCGTTCTGGGTCTAC
ACGACCGGCCTTCCTCACATGCGATATGAGACCAACATTGAGAAACTCTT
CATCCCCAAAGATGCTATGGCTTGGTATGAGCGATCCGTACTGGAAGAGT
TCTTCCCAATGAACTATCAGGACTACTACCCCGGTCACGAAGTCAAGATC
GATCCGGGTCTGGCAGTTCTCATACGGCCCACAGAAGGCCCGTCCATCTT
AAATTCCGCCATTTGGGCAGACATCACGGCCTTGGATAACCTGGTCCATA
ACGTGATTGAGCTCAACGATGGGATCGGGTTTAAAGACATATGTGTCCAA
AGACAGGGTGCTTGTTTAAAGAACTCCATTTTGGAATTGAATCCCTACAT
TAATGAGATTGAGGGCCAAACTTTCAATCTAACCTATCCGAAGATGTCCA
ATCCGGTGACCGGCAGTGATTACTTTCTTCCGGCCCACTTTGGGGGAGTT
CAATTGCGACCGGATAAGAATACCCTGTTGGATGCCTCTAGCATGAGACT
CTTCTACATCTTCGACGGATCAGAGCAGAAACTTAATCAGTCCAAAGCAT
GGGAGGTTCACGCCTCTCTATGGTTGGCCAGTTTAAAGTTTTCACACATC
CACATCGAGATGCTCCACTCGCAGAGCCTGGAACGTGAGTTGGTGCGAAA
TATTGACTCGGCCTTCGACTACTTGGAGATCACTGTGGGTTTGGTAACGC
TCTTCATCACATTCAACTCCATGAACCACAAACTGGGACTGACCAGGCTC
ATTGTGGGTCTCCTAGGGCTCTTGAACACGGTCCTCTGGACTTTCTTGGC
CTTCGCCCTCACCATGAAACTGGGATATGATTGGCAGGCCATCAATTTGG
CAAGCATCTTCCTTTTGCTTGGAGTTGGTCTCGACGACACCTTCGTCATG
TTGGCCTCGTGGAAAGAGACCAAGCATTTGAAATCCATACCCGAGCGACT
CTCCCAAACCTACCGAGAGGCTGGTGTTTCCATCACCATCACCTCCTTGA
CCAATATCCTGAGCTTTTGCGTCGGGGCCGTCGTTCCCGGATTCCCTTGC
GTCGAGATCTTCTGTGTCTACGCCGGCTTTGGCTTGGCAGCCATCTACTT
TGGCACACTGACGCTCTTCGGTCCTGGCCTGGCCTTCTTGTACACCATCC
AAGATGACATTCTGGCCAAGATTCCTCGATTGGGAACCTTCGAAGCGGAT
TGGATCCGGAGATTACCCAGCGGCAGTGAACTCTGCCGAAGGTTGATTGG
CTCCCCGCTCACGAAGGGATGGGTCCAAGGTCTTATTCTTAGCGTTTGGG
TGATCTACCTCAGCATCAGTGCCTACGGTGCTACCCTCGTGGGCCACGGA
TTGGAGCCCAAGAATCTACTACGAAGAGACTCGATGGTCTACAACTTCTT
TGAGCATGTGGTGGAAGACTATCATGAATATGCTTACCGAGTCCAGATTG
TGATCTTGGCCAAGATGGACTACTCGGATCCCGAGGTTCAGCTGGAAATC
AAGCTTGCTTTGGACAACTTCCGACTATCGCCTTGGATGAGCAACGTGTC
CAGCATTGAGGAGAACTGGCTTCAGGTCTACCTGGAGAGTCCCTTTTCGC
CCAATGAAGCCGGTGGCGATGACTTCATTGGCAACCTCAAGAAATTCCTC
GACGAGTTCCCCACTTTGCCAGTGGTTCAAAATGTAAAGTTTGATCCCAC
GGGCACGAGGATCATAGCTTCTAGATTCCTCTTACAAAGCTCATCCATAA
AGAACTCTGTTCAAGAGCAAAAACTCATTCAAGATCTCCGAAGGGTTGCT
CAAGAGTCCCCACTTGAGATCGTGATCCACAATCCCACGTTCATCCTCTA
CGACCAATCCAATCATGTGGTCGGTTCCACGAGTTTAAGTGCCGCGTGTT
GCACCTTGGCCATGTTCTTAGTGGCCTTGCTCCTCATCCCCAAGGTGTTC
AGCAGTTGCCTCATCGTCATTGCCATCATTTCCATTCTGGTTGGGATGAT
GGGCAGCATGTACTTAGCCCAAATCAACGTGGATGTCATCTCCATGATCA
ACATCATTATCAGCATTGGCTTCTCTGTGGATTTCTCGGCCCACATCACG
CATCACTTCATCTCCAGTTCTGAGCCCGACCCCAATGAACGAATCATGTC
TAGTCTGGAGGCCTTCGGATTGCCCATAATCCAGTCAGCATTGTCCACCA
TCTTGGGAGTACTACCCCTCTTCTTCATCAATAGCTACATCCTCCAATCG
TTTGCCACGATGATGACCTTGGTGATTTGCTTGGGAGCCCTCCACGGATT
GGTGTTCCTCCCCGTGGGACTGAGTGTCATGCTGAGAGTGTTGAGCTTGT
GCCATGTGGACACAACTGTGGACAACAGCACTCCTCCCATGCTGCAGATG
GTGAATTTGGCCTTCGAAAATGACGCTTCTGATTTGGCTGAGAACGATGA
GACCATGAGAGACCAAGAGGATCTTGAGTGTGACAAAGGATCCACGTTTT
ATCACTCGGTGGGTCTGGCAGATTCCAATGTTGACTCCATCTCGGATAAT
TCAACCATAATCATTTAATTTCAGACGTTCATGAACTACGCAATCACATT
GTTAACACCATCCATACCTATTGGCTTCTATCTTTTTGCAATCGGAGGTG
CTCATTTAGTGCTAAAGTTAGTAGTTAAATTTAATTTTGCAAAAAAAATT
GTGACCGTTAAACTTTCTCACCATTTTTTAGTCAAACCGCTCAATATTTA
CCGAAACAGAATTTTTTTTTACAGAAGTATTAATTAACTAGAGTGCCAAA
AAATTGTACCTCACTTAAGATGAATAATGAATCCCCATATAGTGAAGTTT
CGGTTTTCCAAAGGCCATATCGAGCGTAACTGGGGAACGTAACTGGGGAA
ATTTGTGCATCTAACACATCGATCCCTGAAATTCATTCCCTCATAACGTG
TTTGAACTCGACGATTTGCTCTTTTGGAGCGGAGCATCTTGGCTGGGATG
TGCGCAAACTTGAGGTGCTGATATTTTTGTACTGGTGATAATCCTCGGAT
AGTGCGCGCGAACGTCAAAGGGAGAGATAATGGCCATTTGGGCAGAAGTA
TATGAAATATGCTCCTGGCAAGTCTGGCTTAGAAACAGCTTGTCTTCGGC
TGACAGGGAATGTCACTGGCAATTTGGTTCACTCATGTACCATTACAAAT
GAACATAAGCCAGTTTCAAAGCAATTCCTATAGTGTTAGCAAAGGTAGGA
AAAGTTAAAGGAGGTGATCATTCTGGCCCAGTTTGTCAAGACATCCATAT
GACTGGGTCAGAGTAAACATGAATCGCCTGCCTTTAGCTTCTTAGCTTCA
GCGCACTAGGGCAACAGCTAACAGACTAGACTCGGTATCGCCTGGACCTT
GGTGATAAAGGCATACCGAACTAGCTGCTTCAACTCACATCATGGAGGTC
GCAGACACCTTGGTTTTTGATTTGGTTGACTTTTTGGAGGAGGAATTCAC
CCGTGAGAGTGTCCCAATGTCATCGCCGGGTTCAAGTGCGGATTTGTCAG
ACTATCTGAGCGGAAACGAAATCATGGACATTTTGTCCCAGGATATCTTC
GCTTGTGAGCCATTCTCTCCGGAACCCAGTTCCAGTGAGCCCATCGATCC
GGCTCACATGGAGCCAACCTGTCCCATCTGCTCCAAACCAGCTGGGAAGC
ACAGCTACTATGGAGCTCAAACTTGTGTAAGCTGTCGTGGGTTCTTCCGA
AGATCCGTTCAAAGCAATCACCACTCGGTGTTCAAATGCTTGGCCAATGG
CAATTGCTCCATCGACTCCGGGTCTCGGAGAAGCTGCAAGCTATGCCGAT
ATCAAAAGTGTGTCCAGGCCGGGATGAACCCATCCTATGTGCTCACAAAC
CAGCAACGGAAGGAGCGGATTGTGAAGCGTTACAAGTCCAAAATTGTGGA
TGTTCAAGGACATCCTCAGGCTCATCAGACCACTGGGACCATGAAAATGA
AGAAACATGCGGCCATGGTTGGCCTTTTTACCTTGGAAGAGGAGCAGAAT
CTTCTGATCAACTACCGAAAGTGGACCGAGTTCGCGTACATCAAGTGCTT
GGACTATTTCAGTGATCATCTGGACCAATTTGACATGTTCATGAGGAATG
CCTATTATGCTGAACCCATTCCCCTCTCCATCACCAAGGCCATGACCAAG
TTGGATGAGAATATCATTGTCTCGGCCTATTTCAATGAGGATGAGGTCCA
AAAGTTGCCATTCAATGACCGGATGACATTGATCACCAAGAACTTTCCGA
TCGTGTACGGATTGTGTTGGGGATTTTATTCTTTGCCCGAGGATATGAAT
GCTTATATGGAGGGTCTTTTGAGCTTTGCGCTCACAGACACTCAGAGGAA
CCGTCGATATCAGAGCTTGGTGAATAGTATCAAGGACACCATGGCCAAGA
GACGGAAGATTATCAGCAACTTTCGCGATGTGATTCCCAAGGAGTCGTTC
GGCAATAACTCCGAGTACGAGAATTTCATCAGCGACACTGACCACATTGG
TTCGATTGTGACTACAAACCAAAACTTGGACCCAATCTTGATGTTCCTAT
TGTTCAACTTTTGCTTGTACGCCACCGAATTTCCCGAAAAACTGGAAGCG
ACCGAAATGATTGGAGCGTGTCAGCAAAAGTATCTGCACCTAGCGTACCG
GTATCTTAGATTTAAGTACCCCAAACGGAGCAGTGCCAAACTACACGAGA
CCTTGATGATTACCCTGAAGGCTCGAAATGTCTATGACACCATGAACAAA
GTCGTTTCGTGTGACTCGTAGCATCTGGTTCTAATTTGCCGTTGGATGCT
GGATCAACCTAATTTACTAGCGACCTAGACTAGGGATGTCTAGTAATATC
TTTTGAAAAATGTCAGGAGCGGATTTTTTTGTTAAAAACCATGGCAAATA
TGCCAAATGAAGTTAATCTGGTTAAGAAGAGCCAAAAATGCAAACTTACA
TTTTACTATGGACTATGGACTATGTATTAGTCGACTAATACAACGACATA
AAATGTGAAAACATATTCAAAATATGCTTACCTTTTCGCAAAGACTACTA
ATTACTGGACAGAGGAAATAAGCTGAAAATGTTAACACAGATATGGCATT
TTTGGGTGATTGAAACTATCATTTAAGGTAATTAAAAATTGCAAAAGGTT
ATGTTTTTGATTCATATTGGCCTATTCGGCATTGTTTCTGCCACAGAAGA
AATGTGAGACAAGCTATTTATGGAGATATTTTCCTTGGAGTTGAAGCCTG
TGGGAGAGGGCCCTTAAGTGTGTTATCTCACCTACTAGTGGTTTCGTGAT
CACACCATGGAGCACCCATGGGAACACAGGGCCCACTGATGTTTTTAGCT
AATGTAGCTAGTCACCGTGCAGCCCCGTACAATCCAGCTCCAACCACTAC
TTTAATTTGTGGGGAACCAGAAGGGACCTTCCTCAAGATGTGGTCACACC
TGTGTCCCTGATCTTCAATGACTAGTAGGGTTACAGGGAGTCGTCAGCTC
CCCTCAGTGGAGTCTGGAAAAGTCTGGAGTGGCGAAAAAATATTGTTCTT
CTTCATTGCATATTCCCCGTTTGCTCGTTGCTCGTGGCCTTGTCTTGGCT
CGGGTGAGCTCAAGGACAACAAAAGGGCCAGTATCGTTTATGACGTGAGA
ATAAAGACGTGTCCACCTCTATTCTCCCGTACGTTTGTTGCTTGTGATTG
GGGGTTCAAACCCTCAAACTCTCCTCACCCGGAGTATCCCGCACCACCAT
TCAATCTCAAAGTATTAATATTACGGGTGTCCTCTCCCTGATTCTGTAGA
CATTATAAAGACTTGTGTCCTTTTACCACTACTATTGAGTTTTATACTCG
AAGTGCAAGTTTATCCATTTTTTAGTGGCGGTCATTTAATTGACAGTTCT
CAATCGCAAAGGAAGCAGAATGTGCTGTTGTGAGAAAACCTTTTGTGTTG
TGAAACCCATCAGAGGAACCTTTTGGCCCATGGGAAAACAAAACGATGAC
GAATTTATGATTCATTGGTTCAAATTGAAGGTTGAATGACGAAACTAGCA
AAAATTCTAAAAGGTGATTTTTCTGGAAAATGGCATTTTATGTTTTTTCT
TCCAAAACTGGTCTTTAAGGTGAAAAAATATTTTTCAGCTGACTACCTTT
TTTTCTCGGTCTACTAATTACAAACTGTTTTATGGTCCAGGCCATTGCAT
AGTAATGATTTACAAAACCCGCAGAAATAATCTAGTGAATTTTGAATATG
ACTAGAAAAGGCAATTTCCGAGACTCAACTTGGCACATCGTCTGATCATA
CCTCAATTTTTTTTATAGGAGTTTTTTATTTTCATTGAGTTTATATATAC
AGTTATATCAGCAGCGACAATTCTGCTCAAACGATTTTCTTTATAAAAAA
TGGATTCTCCCCAGTAGTTTGCGCTGCGTTTGTATTATTGATGTATTGAA
TTATCATTTATATTGATTGGGGTTATACTGCGTGTTTTTGTCTAGTTTTG
CAACTCGAAAAATCTGGTGCAATACCAATAGGTTTTGGGACTTTCCTAGG
GAAACTTTTAGTCCACTTTTTGGCAAAAATAATTAGCATCCCTTGGGCTG
TTGTGGTTCAATTGCTTATGGTATTGTTTGGAGTTGCGTTACATATATAT
GTGTGTATATGATCAAGCTTTTGGTCTCGCAGAGAAAATGTGGAAAAAAC
AAATGAATTTGTGATTTCAAGATAAAGTTTCACACAAGAAAATACTGTAC
AGTGTTCCTCCTATTGGGTCCATTTTAAGGGCATGCCAGTTTTGTGAATC
TTTTACTCGCTGAGAAATAGAGTAAAACATCTAGTTTCTATCGAGACCTT
TCTGGTGATATTTTGGCAACATTAGGTTGTAAATAAATGGACCCCCCTGG
GGCCTGGGATGGGATGCGACTTTTCGCGCGTCCCGACTCTCAACTCCTTT
GAGTTTTGGGAGTCATAGACTCTCGACTCCCGAGTCGACTCTTTTCTCCA
CTCTTTTCTCGCCTCTTTCTCAATATGGAAATGGGCCATTTTTGACGTTT
TTTTCACAACTCGCCATCAGGTAGGCAAGGCACAATCAGTTTGGTGATCA
ATAATATCGATTTGGAGCTTGTACAAGGTATTTTGTACCATTTGGGGGCA
AGCAAGGTGATTTGGCATTTTGAAATAACAAAAGACAGCCCTGGATGATG
GATGATTTGCGAAGTGTTCAAAACCATCAAACACTGTTCGGATTTTTTTG
ACCGCAGAGGAAGTTAATGACGAATCCATATCATGCTTGACAAACAAATT
AGCGGACTCTTTGGAAGATATTGAAACTCGCGAGTCAAGTCATCGACTCT
ATTTCGACTCTGGACTCGCGAGTCAACCCATTCCTAGTAAGCTGGGTTCT
GTGTGGACGTTTGAAGCTATTTATGTCCCTGTCACAGAGCGAGGGATGCC
TGTTTATTTCATAGATGCTATGAACATGTTATATGTGAAATATTTAGCCG
GCTTGATTGAGGACATGCTCATCGAAGACCCGTCTGGCCTCGACATAGCC
TGCGGCCGAGTTTTCGGTCCAGTCCCACGAGGGTGAGTACTTGAAGCCGT
TCTTGACACTGGCATACCAGACCATGATTCCCCTCAGATCCCTGCTCACG
GCCTCCTTGGCCAAAGTGATGGTCGTCAGGGGTGTAGCCGAGCCCTTGGC
GCCGAGGAGGATCTCACTCGTGGGGACGTTGACCTCGATGGGGAATCCCT
CCCACTGTTCGCTGCCCTGA back to top
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