snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1, snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1233_size54137supercontigscaffold1233_size54137:329..6771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
influenza virus ns1a-binding protein asnap_masked-scaffold1233_size54137-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1088snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1088Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1089snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1089Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1090snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1090Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1091snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1091Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1092snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1092Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1093snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1093Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1094snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1094Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1095snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:exon:1095Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:three_prime_utrsnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949794Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949795Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949796Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949797Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949798Tigriopus kingsejongensisexon
snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1:cds-1949799Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949800auto1949800Tigriopus kingsejongensispolypeptide
Tk05994Tk05994Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05994

>Tk05994 ID=Tk05994|Name=Tk05994|organism=Tigriopus kingsejongensis|type=polypeptide|length=801bp
LSVILLSQNSSNLDTMRLYEDFTSTPVDPGPKNVVEDDDDSEVEGGAGRP
DLRWEDGQFHGHTLKALNQMRKDKHFCDVTLQIDKQDFPAHRAVLAAVSP
YLLELFTSQRDLPTRKEVEGVTGVTYELNGGFSKEALQILIEYAYTARLN
IPAKSIRSVFLAAIRLRMERVSFECAKFLAEHISLETCLELRNMPGITRL
NDLVHKVDEYIQTNFKLIQQSRSLMTLPKICVEVIHNSKEDCEGAKSKAL
CQLALDWIHSQWLEDEKMSLDSLRLKTHLLYMGRENKLEDCNEIEEGSIN
DSELIQDYKKINQQLPRQTKKIRRHSSKKPLRPHEVLYSRHINQDEEKTE
DVLEEWKVVACQIIDDKTILGLITVDGLLTVISLIQRLNHSASPDGTFKP
VVAPSSLALAFGTGTKKGSKATSPAMSRPPSEEADLYAPLAAMNRAKCAV
GTCELDGKLIVCGGYDRGECLNSVEAFSLETNSWSQLSKMLAKRGRFDIT
VLGGKIYAVAGSNGHSEQPTAERYDPVANKWSPLVNLPSPMANIGVTSVN
GTLYSVGGTFGQSGNKTCFRYDEDENKWKQVASLQVGRSQGGVTSFQGKI
WTVGGCDAWNPLASVEIYDPASNTWRMGPPMSTPRRGCGIVSKDGLLYVI
GGSDGTQALCTTEIYEPRMNLWTPGPNMTTCRANVSAAVVGGRIWAVGGF
NGKNFLSTMEFLDPRRDEWTTYISTKAETAPSAPRVFPFKVEQVEDTLDR
LKLGQDLPNYDSSASNNNNVAVNGAGEVEKKVTIVEEPTTSTSACGQGQL
M
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mRNA from alignment at scaffold1233_size54137:329..6771-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold1233_size54137-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6443bp|location=Sequence derived from alignment at scaffold1233_size54137:329..6771- (Tigriopus kingsejongensis)
AGAGAGAGAAAGAGAGACGCTCAACGTTTGTCCCATTCGGCCGAGGATGG
CGCTGGAGTCGCGCTCGCTCGAACCGTGTAGAATGCTGCTCTATCGGACC
AGGGATTCGTAGCACATTTGTGTTCGTGTAGTCCTGCTGGAGCAGCGTAA
GACCTGGCCGCCGACCTTCCGAAGTCAAGTCGAGGGGTTTGGAGCACGTG
TAGTGTGTCGTTGAAGGCTCATTGTCTGTGATATTATTGTCCCAGAACAG
TTCCAATCTGGACACCATGAGGTGAGGCACACGTGCCCACCACCGGCCCT
TGGGTCTGTGGATCCTAACGCATCTCTTGACTCTTTTGCTAGACTGTACG
AGGATTTCACTTCGACCCCGGTCGACCCCGGCCCCAAGAACGTGGTCGAA
GACGACGATGACAGCGAGGTGGAAGGAGGAGCCGGACGACCCGATCTCCG
TTGGGAGGATGGTCAGTTCCATGGCCACACACTCAAAGCCCTCAACCAAA
TGAGGAAGGACAAACACTTCTGCGACGTCACACTCCAGGTACATATATGT
ATCCTGCTTAAGGGTGGAACAAGGGAGGGCTAATTGGCGAGGGCACGGGG
TATCCGGCCAGCAACAGGGTTGGCCACTTGGGACGGGTGGATCTAGTTCA
TGCCATTATTTTAATAGGTTTAATACTCTCGTGGGACCCGTTGGCTGGGC
TCTGGCTGGGGCTAATCCAGAACTTGGCCCAACCTAAATAGTCGGATGAC
ACATCGCACATGAGGTGGTGATGATGAAAGCTTAGGTGTGCACATGTGTA
TTGTTTGAAGTAGCGCACCCGGTGTTATCATGGCCTCTGGGGAATGACGG
CAAACATTTGTGACTATATTGACTAACATACTCAATTGGCCTACTTGTGA
GAGAGATTTCCACCATAAAACATTCTGGCAAAGACCTTAAGCCCGGTCGT
GGCCAGTAGTGGAGGGGGGGGAGAACTTATCAACCCCTGTAATCTCGCCA
TTTTTTTGGCAACAAATGTGTCCCCCAAGACGTCTTGTTGGGATGAATGC
TCGTTTGCGCACTGCCAAGCCCAAATTTGGGGCCTGGATCGGCTTTGTTT
GTACCTATGCTCTTTGCAGATTGATAAGCAAGACTTTCCCGCCCATCGGG
CCGTTCTGGCCGCCGTCAGTCCCTACTTACTGGAGTTGTTCACCTCGCAA
AGGGATCTGCCCACCCGGAAGGAAGTGGAGGGCGTGACGGGTGTGACCTA
TGAACTGAATGGAGGATTCAGCAAGGAGGCTCTCCAAATTCTCATTGAAT
ACGCTTACACGGCCAGGTAAACACATTTACGGACAAGGTATTTCGTTGTG
AATGCGGATGTTCTCCAAGCTTTCGTGACATTTGTGTCTGGAGACGGAAC
ACGGAGATTGGGAACAATTAGGAGCTTCCTCGGAAATGATGGACAATGCC
CACTCATTCATCGTCGTAGTCTTTGTGGCCTCAATTCATTTTCGTCGCTT
CGCGACAGAAGCGTTCAAGACATTTTTCTCCTATCTGATCCACCAGGCCA
GTAGCTCAAAAAAATTACTAGCCGTGAATAGCATGTCTGATTCAGCTCGG
GCCCAACAATGTGTTACGTCCATGGCACGCATTGATGAAACCGTATTTCT
TCTGCCTTTTGGCACAGGGCCTTCGTGGTTCCACGAGTAAACCACTGAAC
TCTCAACTGCGTAGTTTTCCCGAACCAATCGTAGCACAATGCAGGAAAAG
GAACTGCGTACACGTTCCATGACCGCTGCACATCTATGAGTCTGGAGAGT
CACTTCAGGAACTTATGAACGAGCCAACTCGTACAAAGGAAATTCGAGGT
CTTCAAGCAGCGACAGCTTTCCGCTCCCATGAAGCCGAATGCATGAAGCA
GGATGGCAAACTTGTTCCGTGAGTCAATGCATCACTTTTGCACTCTGGCT
TTCCGAAGGACTGTCCAATCTCGAGCTCTTTTTTACCATTTCTGAATTGG
AGAGTTTGACAATCGCCCAGCAGCGTCCAAAGGTCTATCCTGCACATCTT
TACTCTGTGTCCATTCTGCAATGACTTCTTGGACATTACTCGAGTCGACT
CTCAAATACCTACTATGTTACCACTCCGCTCTACGAGGGCACACTCGCGA
GGGGATTCGTCCTTGATGAAGGCCGAATGTGAACTAACCGATGCCTTTTG
GGGTTGATCCTCAGGTTGAACATCCCGGCCAAGAGTATCCGATCCGTGTT
TTTGGCTGCCATTCGCTTGCGAATGGAGCGCGTCTCGTTCGAGTGCGCCA
AGTTTCTGGCTGAGCACATAAGTCTTGAGACTTGCTTGGAATTGAGGAAC
ATGCCCGGGATTACCCGACTCAACGATCTGGTCCATAAGGTGGACGAGTA
CATCCAAACCAATTTTAAGCTCATTCAACAGAGCCGCTCCTTGATGACCT
TGCCCAAGATCTGCGTTGAGGTCATCCACAATTCCAAAGAGGACTGCGAG
GGGGCTAAATCCAAGGCCCTCTGCCAATTGGCTTTGGACTGGATCCACAG
TCAGTGGTTGGAGGACGAAAAAATGTCCTTGGACTCGCTCAGGCTGAAAA
CCCATCTCCTCTACATGGGTCGCGAAAACAAACTGGAGGACTGTAACGAG
ATCGAGGAAGGATCCATTAACGACTCTGAGTTGATTCAAGATTACAAAAA
GATTAACCAACAACTTCCAAGGCAAACCAAAAAGGTTAGGATTCACTCAA
GGCTCCTGCAGGAGGACATCCAAACTGAATTCTATTCTGTTCCCAGATTC
GCCGACATTCCTCCAAGAAGCCACTCCGACCTCATGAAGTGCTCTACTCC
CGGCATATCAATCAGGACGAGGAGAAAACCGAGGACGTTTTGGAGGAGTG
GAAAGTGGTGGCCTGTCAAATCATCGACGACAAGACCATTCTGGGCCTCA
TCACCGTGGACGGCCTCCTGACAGTCATATCTCTCATTCAAAGACTCAAC
CATTCCGCCTCACCCGATGGTACGTTCAAACCTGTGGTCGCTCCATCCAG
CCTCGCATTGGCCTTCGGCACTGGCACTAAGAAAGGCAGCAAGGCCACCT
CTCCTGCCATGTCGCGACCACCCTCCGAAGAGGCCGACCTCTACGCTCCT
CTCGCTGCGATGAACCGGGCCAAATGCGCCGTGGGAACTTGCGAACTGGA
CGGCAAGCTCATCGTTTGCGGTAAATTGACAATTAGCTTACCTTTAATTA
CCCAATCCCAATGCAATTGAGTCAGATGTATGCGTCTGGATGCAGATGGC
ACTCCCAGACTGTTCAAAATTCGACACAGTTAGCCACTGTTGTCCAGCGG
ATAAACCCGAGCCGAACAGGTTAACCGGGAAAGGCATATAGACACATTAC
TGCTAGACTGCTCCGTAAAATGCTGGGCCCTTGGCTTGACACATGATATA
GCTAGAATTTTCAATGAAATCGGTGGTTCTCTGGGGTGAGAAACTGCATG
AACCGTGCTCAATACTTCGTATTCTTGGCCGAGAAACCGTGCCGTGTCAA
TTTATCGGTATTCATTTCACGCAACCTTTCTTCAGTTGCTCTGAGCTAGC
GCACTGTAAGGCTTGTATTGTAGGTACATGAGCTCGAAGGGGATCGGGAT
GGATTTCTTTTTAGTTTTGAAGTGAGATTTCATTTGACATTTTCGAACTT
CAGGTGGATACGACCGAGGCGAGTGTTTGAACTCCGTGGAGGCTTTTAGC
TTGGAGACCAATTCCTGGTCGCAATTGTCCAAAATGCTGGCCAAGCGGGG
CCGCTTTGATATTACCGTCTTGGGCGGGAAAATCTACGCTGTGGCTGGAA
GCAACGGCCATTCCGAGCAACCCACTGCCGAAAGGTACGACCCCGTGGCG
AACAAGTGGTCGCCTTTGGTCAACCTCCCCTCGCCCATGGCCAATATTGG
TAAGTACAGAAGTTCTTTCTACTTATGGTGAATGATGACCCATTTTTTCC
TTGTCCCGTTAATGTGTCGCTGGTCAAACACGGAGTATGGAATGAGAAGA
GGCTATTATAGTCTTCAATCAAAATATTTAATGGGAATCTTCCCGTCTCT
TTTTCCTTTCAGCTAGCACATTTCAGTGCTCACGCCACTACTTGCAGACA
TACTACTACTACTTCTGCATATGATGTGTAACTTCTTCTTAAGTAACGAG
TTACAGGAACACCTCTTATTGGCAGAGCTCTGCACCCTTTCCGAGCGGAC
CAAGGGGATTTGAAGATTAGTTTTTAAGCCAGTTTCAGATGATCAGGCTA
CACTTAATCCTTCTTATAAATTGGTCGTTGGCCAAGGGTCCCCGAGGTAA
GTGAACTACAGCCACCGTTTTCAGAGATTCTCATTCCATGCTCCAAATGA
AGACAGAGACATTGACCATGGAATCCATGTGCGAGCGTGACCCATCCTCT
GTGTGCGTGTTGGGGTCCATTTTCAACCATTGGTCCTCTTTTTCCAGGCG
TGACGAGTGTGAATGGAACACTTTATAGCGTGGGCGGCACCTTTGGTCAG
TCTGGAAACAAGACTTGCTTCAGATATGATGAGGACGAAAATAAGTGGAA
ACAGGTGGCCTCACTTCAAGTCGGTACGTGACCAATGCGATATGTCATTA
TAGCAGCACAACCAAGTCCTTTTGGCTCAATTTGAGTTGTTGTTTTTTGC
TAGTTTATTTGCCAACTGGGCAAAAAGAACCAGCCCTCCAAAGCAAGATC
CCTTCATGAACTAGTCATTTCCCTCAACCCAATTTAGATGTGTCTTCTAG
AGTGTGAAATGAACTTGGAAGCTAAAATGAACCTTATGGCTCGTTGAGCA
ACCACATTTACGTATGCTGCTGGTTGAGGTGTCATTTCGTAAGGCCCCGA
TTGGTCCAAGGTTGCGTGATTGCCTTGTTGACGTATTTGCCAAGTCCCCA
TGACAAACACTTTACTGAAAGGCAAATTATATCGTTTGGTATTGGGTCGA
TTAGGGAGCGACTCTATGGGGGGATATCATCGGAAAATGCCAACTAGCTC
ATTAACCCTTCTTCTCCTTTTCATGCGCAGGTCGATCTCAGGGCGGTGTG
ACCTCATTCCAAGGCAAGATTTGGACTGTGGGGGGATGTGACGCCTGGAA
TCCCCTGGCCTCCGTGGAGATCTACGACCCGGCGAGCAACACTTGGCGGA
TGGGTCCACCCATGTCCACACCGAGGCGAGGTTGCGGGATCGTCAGCAAG
GACGGTCTCCTCTACGTGATTGGAGGCTCGGACGGGACCCAAGCCCTTTG
CACCACGGAGATCTACGAGCCAAGGATGAACCTGTGGACTCCAGGTCCCA
ACATGACCACGTGCCGTGCCAACGTATCGGCTGCGGTGGTGGGCGGGCGC
ATTTGGGCCGTGGGTGGGTTTAATGGCAAAAATTTCTTGAGCACCATGGA
GTTTCTCGACCCGCGGCGGGACGAGTGGACCACCTACATCAGTACCAAGG
CCGAAACCGCGCCCTCGGCCCCGCGAGTGTTTCCCTTCAAAGTGGAGCAA
GTCGAGGACACTCTGGACCGACTCAAGCTGGGCCAAGACCTGCCCAATTA
CGACTCTTCTGCCAGCAACAACAACAATGTCGCTGTAAACGGCGCGGGAG
AGGTGGAGAAGAAGGTGACCATTGTGGAGGAGCCGACAACCTCAACATCT
GCCTGTGGTCAAGGACAGCTCATGTGAAGATGAAGAAGGACAGCAACTGC
GGACAGCATCTCATCCTCCACCCTCTCCTTTATTCCATGTGTTTCCCCAA
AGAATCCACTTACTCATGCACCCACACATACATAACTACCTTGCGTGTTC
CGTCGCAGTCAATCAAATCACATGAACTGGATCTGAGTTATCAATGTAAA
AATCATCTGGAGATTCTTTGCACCCGAAACATACCCGTATTTATTATACC
CCATCGATTCATCATCCACAATCCAGGCTACAATCGACCATGGCACCTTC
GAAGTCGGATCACATTACAACCCTTTTTCACCTCGACGAAATTGAAGAAG
CACAGTGGTTTTTGTCCAATAGAAGTTACTCAAGTAGGAGTGAAATGCGT
GATGTTTGCCCTCTCGACAATAATAATGTGTGTTCATGTATATGTACTAC
TGTATACTGTACCATTTCTCAACCCAGGCGACCACCGTTTCCCCTCCATA
GTAATTCTTAAGTTGATATTACACGAGCTACCATCAATTGTCAATCACTC
TGGAATGTATCATTTCAACATGATGAACTGCAATATATTTTTTACCAAAA
TCTACACTCGCAGCTCGATTTCTCCTCATCGGCCGCACTCGGATAAACTT
GGGAAGGCCGGACCGTTCACCGAAATGCAAGTCCTGTTACCGGTCTCATA
AAAGTCGCACGACTCGGTGAGACGATCGTACACAAAGTAAGTA
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