snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1, snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1
Unique Name	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold14_size734282	supercontig	scaffold14_size734282:236947..243475 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
charged multivesicular body protein 1b-like	snap_masked-scaffold14_size734282-processed-gene-2.15	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:exon:371	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:exon:371	Tigriopus kingsejongensis	exon
snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:exon:372	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:exon:372	Tigriopus kingsejongensis	exon
snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:cds	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:cds	snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1:cds-2012583	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2012584	auto2012584	Tigriopus kingsejongensis	polypeptide
Tk11292	Tk11292	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold14_size734282:236947..243475-

protein sequence of Tk11292

>Tk11292 ID=Tk11292|Name=Tk11292|organism=Tigriopus kingsejongensis|type=polypeptide|length=233bp
MSAVMEKHLFNLKFASKQMLRDSKKAEKDEKVEKAKLKKAIEKGNMEVAR
IHAENAIRQKTQSLNFLRMSARVDAVASRVQSAVTTKRVTGSMQGVVKAM
DSAMKSMNLEKISGLMDKFEKEFEDLDVQTSVMEGAMNQTTATNVPQDAV
EGLMKQAADEAGLELQMELPGAASNTIGTTAGTAVGNTDQDELSQRLARL
RQSGTRNVSPQSDITARKVPDFYDAWGRQCRRH

mRNA from alignment at scaffold14_size734282:236947..243475-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1 ID=snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1|Name=snap_masked-scaffold14_size734282-processed-gene-2.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6529bp|location=Sequence derived from alignment at scaffold14_size734282:236947..243475- (Tigriopus kingsejongensis)
ATGTCGGCCGTGATGGAGAAGCACCTCTTCAACCTCAAGTTTGCGTCCAA
GCAGATGCTGCGCGACTCCAAGAAGGCCGAAAAGGACGAGAAAGTGGAGA
AGGCCAAGCTCAAGAAGGCCATCGAGAAGGGCAACATGGAGGTGGCCCGG
ATCCACGCCGAGAACGCCATTCGCCAAAAGACCCAGAGCCTCAACTTCCT
CCGGATGAGTGCTCGCGTGGACGCCGTGGCCTCGCGGGTCCAGTCGGCCG
TGACCACCAAGCGGGTGACGGGTTCGATGCAGGGCGTGGTCAAGGCCATG
GACTCGGCCATGAAGTCCATGAACCTGGAGAAGATCTCGGGCCTCATGGA
CAAGTTCGAGAAGGAATTCGAGGATCTGGACGTGCAGACCTCGGTCATGG
AGGGCGCCATGAATCAGACCACGGCCACCAACGTGCCTCAGGATGCGGTC
GAGGGCCTCATGAAGCAGGCGGCCGACGAGGCCGGCCTCGAACTCCAGAT
GGAGCTCCCTGGAGCGGCCTCCAACACCATCGGCACCACGGCGGGCACGG
CCGTGGGCAACACCGACCAGGACGAGCTGAGTCAGAGGCTGGCCCGACTC
AGGCAGGTTTAAGACGCAGGCCCGATGTATCCCCACTTACTGTGTATCCA
AACTGTCAGGAAAAAGAACCCGCTGAATTATTTTCTATTGCCGCTGAATA
AACCATGTCTACGTCCCATTCGTCGGCCTAATGAAGGCCTCCAAAGACCC
AGAGCCGGTCAGAGTGTGTAATCGCACCTTCCGGTGGTTTCGTGTTCTAC
ACCATGGAACCCCCATGGTGAACACAGGGCCCACTGATGTTATTAGCTAA
TTTAGCTAGTCGCCGTGCAGCCCCGTACAATCCAGCTCCAACCACTACTT
TAATTTGTGGGGAACCAGCAGGGACTTTTCCTCAAGATGTGGCCGCACCT
GTTTTTCCTGACCTTTGAACGACTACTGTAAGGTTACAGGGAGTCGTCAT
TCACTCCCCTCAGTAGAAGAAAGGCTGGAGTGGCGAAAATTTCTTTAGCC
GCCGGGCCCGGGAATCGATCTGCGGCCTTTCAGCCCGGGAGACTTCTTCG
CTGACCACTTCACCATTCAATCTCCATAAGAGTGCCCAGCTTGGAGGTTC
TCCATTTATAGGAGTGAGCGTGGCTGGGAAAGTGGCAAAAAGCGACGACG
AGGCAGCTGATCTAAATGCGCTTTGTCAGGTCTTTTGATGGCTGGCCCGG
CGCGCTCAAGAAAGCGTCCGAGAAATTGGGCAGGCAAAGACTCAGCTGTC
TCAAGTTTGGTCACCCTGAGGCATGAAAATGAAAGGTCGTCCAGTTTCAA
AACAGCCAGGGTGACTGCTCAGCGCGCTTTTTTTGCATTTAGATCAGCAG
CCCTGTTGTCGCTTCTTTTTGGCCGGTGCCTTGCTCTGGTTATATTACCT
CAATGCAATGTTGCCAGCCATTGATCCTCGAGTCAAGTATTTATGCATGG
CAGAGGGGCAAATGCAGGCGGATTTAGATCAAACAATTCAACCAAGTTGG
TGGTAACGCTTTCGGGCTTGTTTAAAACTAAGGATCTTTATACTGGGAGC
TTAGTATGGTTTCGTAACTATGTCGCCAACAGATTTCAATAACATATAGC
CAGTAAACATACGTATGGCCAGGCATCTTCTAGGCAAGCAATTACATGCA
TTTGTGTTCCACAGGGATCTGTCCGTGGGCCTCTTCTGTTCTTAATTTTT
ATCAATGATATGACCAACAGTAGCAACTTTCGCACAACCATATATGCAGA
CGCTACCACACTACAATACTATGGAAAAGATTCTTCAAGACACTTCAAAG
ACACTTCAAAGTAACGCTCAAATATGGTTTGAAAAGGTTTGTGATAAACT
AACTCTCAACATTGCCAAGACGAAATACATCCTCACAAATCGCACCAGAT
TGAAAAATGCCGAGGGATTGATCTTGAACGGTGCGGTGAAAGTTGTCAGG
AAGGTGGGGTGCGCTTTCTCGGCTTAATGATCGACGAAAGCCTTAACTGG
AAGATCCACACAAAATAGGTGGCCAACAAAATTAAACGAACTCTATTTGG
CTTGTCTAGGGTAAGGAAATGTATCCCTTTCAAATTAAAGTTGATTCTCT
ACCAGGCTTTGATTGAAAGTGTACTAGGGTGTATGGCTTGGAATTGGTTG
GCAATGGGGCTGGTTTGAAACTTTCAGAGACGTTGCAGAAACGAGCCATC
CGGTGGGTGGCAGGGACAAAATGGTGTTCGCATACTGAACCCCCGTTTTA
AGCGATGTAAAATTTTAAAACTATCTGACCTCAAAGCAGACAAGATTTTT
AAACATTTGTATCAATCATACCACTCCAAACTCCCTGAGGTTCTGAATTT
CTATTAAAGACGCCAGGTTGGGAACTATCTTTGACTTACGCAAAGCCAGT
GGTCGCAGGACCTGCCCTCTTTCTCATTTCCTAAACGGCGGAACACTCTG
AGCAAAATGAGCGTCATCAATGCAAAAACCAATCATAATGGCTTCAACAT
CACTTTAAAGCAGACATTCATCGACGAGTATAAGTTTACCTGCATCCTTA
AACTGTGTTTTAATTGTACAAAGATACTGACTGATTCCTCTCACAGGCGA
CTGACTAACCCAATGAGTTGGATGTCCTTATTGTTTGGTATTAGCAGGAT
CGTATTCGTGTAGTCCCGACTTCGCAAATCAGCCAAATCTCATTTTCAAT
CGGCAGTCTATGCTCAAATCTAGAGAGCACGTATTTGTCTTGTCATTTTT
ACCAACGTAACCATTCTTGTCAAGTGGCACTCGTAGGGTCTAATACAGTA
TTTATCGTGCGCTTGCTGGTGCTCTTTTTTCGGTCAAACCTTATATGTTT
CTGGGAATGCCATGGGCTGTATTTCCCCCCCCCCCCAGAAGTGTTTTGCA
TATTGCATCAGCTCTGAATTTAATTGTGTTTGGGACTTAAGTAACGAAGT
TATTTCAAAGTCGTCTGTCATTTGTAGCCTTCTTCTTTTCGTTGTACGTG
TACATCTCTCCATCGTCGATCAATTTTCCTCTGTGCTTTCTGTGTTTTAA
ATGTGTTTGTATTATACAGTAGCATCAAATTCCATGCGTCATTTTCCAGG
GGCTAAAGTGAAAACAAGCTATGCTTATCTGGTTTTGTCTTGGGCCGGTT
GGTTGAAATAAATTACTTACTTAATACAGAACCAAGTTTGAAGGCGTTGC
CTCAGCCTAGAGTTGAGATCTCCCAAACAGCCTGCATCTGGCAATTTCCA
GGCTGCCATTCTACCCTGCATGTAAACTACTTGGCCCAGGTGATCCAGAC
TGTTAACACTCAGTTCAGTAAACGTAGGTAGAGACGTACGTTCCCCGACT
CTTCGTCGTAGGCCAGGATGTCTACACAAGCACATAATTAGACGGGACAT
TAAACGCTAATAAGGTCAATCTGGAGTGTGTTATCGCACCTTCCGGTGGT
TTCGTGTTCGCACCATGGAGCACCCATGGGAACACAAGGCCCACTTGATG
TTATTAGCTAATTTAGTTAGTCAGCGTGCAGCCCCGTACAATCCAGTTCC
AACCACTACTTTAATTTGTGGGAAACCAGAAGAGACCCTTCCTCAAGATG
TGGCCGCACCTGTGTTCCTGACCCCCAAGGAAATAGGGTTACAGGGAGAC
GTCAGCTCCTCTCAGTAGAAGAAAGTCTGGAGTGGCGAAAATGTCTTTAT
CCGCAATGCCTGGGAATCGATTTGCGGTCCTTCAGAACCGCAGACCTCAT
CACTGACCACTTCACCATTCAATCTCCTTAATCTTCCGAAGTATACCAAT
AGGACTCGGAAACATTCGGTCGGATGCAATTGTAGTGATGGGCTTAAAAG
GTGGTATATTTCGGCTGAATTGAGTCATTATATTTCTTAGCACAAACAAT
TTTTGTTACCGGTAACAAGGAGGAAGTCGGTCGAACCTTCGCAATCCATA
CATAAGATTTTGCATTGGTTTTTGTCTATGGGATTCATATGGTTTTGCAC
CATCGTCAGGTGCAGGAAGAGTTTCACTCTCAATTCCTGGCTCGCTTGAC
CACAGTTTCATGGTACTGAGGCCGCACCGAGCTCTTTCGCTTCGGTCGGC
AACTGGTGGGAGGCGATTTCGAAGTGGAGGCTTCGGGCATGTCGTCATCG
ATGTCGTCGTCGCCTTCGTCCTCACTGTTGTTTGGGGAATGGAGAACCTT
GGCAATGCTGCGTCGACTTCGACTCCACAGACTGTCCAAGACCCAATCGT
TGCCGCCAAATATCTTCAAGAAAGATCCAATAACCTGTTTGAGAAGGAAA
AGTTGGGACTATTACTCAAATACCTCAGGGTGATTTGCCAAGCTTCCTGG
CATTATCCAATTTATTTTCAGAAATGCAGTGGCATTTGGAATGGACCATG
TTATAACATTATTGTTATCATTGTATGAGTAATATACGTATAGTATCGAT
CCAGTTTAAAGCCTTGGAAAAAGTATGGTCCATGAAATCAGAATCGTACC
AGACTGCCTTTACAACATAATTGGATCGAGATGGTTAAAGTTACCTTTGG
AGGCCATGATAATGTTTATCTTTAATAAAAATCGCTAAAACACGATTAGT
TTCTGTTAAAATATAGACTTTAAGGAATCGTAAGCTAATCTTTCGCGAGA
CAGAGTAGATTCGGGGTAGGAGCGTCATTCATAAAATTATCCAACATCCG
AAATTATTTCGGTAATTAGGTTTTAAAAGCTTTGAAAATTACCCGTTCCC
CATTGTTGTATTTGTCTATATTTTAATCAAATAAAGACTTTATTAATTTT
TCAAATTATTTCTCAAGATTACGCGAAAAATCGTGTTTTTCTGGACTTTT
CCGATTGCCACTAATTAGGTTTGCCGCCTAACTCACCTCTTTACTTTTGT
CCTCCCAAGTGTGCTGAATATGATCGCGCGTCTTTTCGATGTAGCTCTTG
GTTTGATTGCTGATATCCTCCACCTTATTCTGGAATCGTAGCTTCTGGCC
CCGAATGAACGACACGTTTAGATCCTTGGCCGAGTAGCCTCGGGCCAAAT
TCCTGCGGACGAAGCGGTCGTAATTGCGCACGATCCGGGTCACAATGTCC
GAGGTGGACACGCCCTCCGTCCTCTGAGTGGCCACAAACATGCCCTTCTC
CTTAAGGTCCTTGTACACGTCCACACCCGAGCCAGTGGTGTAGGGGAGCT
CGTCGTGGGCCACGAAGTCAATCTTGTGCTTGGCCAAGTACTCGTCGTCC
AAGCTCCAGGGTGCATTCTTCACAATTTCATCCACATAGCGACAGTGTCG
AATACCCTCGTATCTCTCGCTTTCATCCATGACCGTTTCGCCTAAAAGGT
ATAGAATATCAGGGTCTCACGATCCGGTCCTCGATCGTGACTCGTCTAGC
TGGCTTCATCTAACCTGGTCACTTTGAGGCGTTCACCTTCCTCTAGGTCA
ACCTCGATAAAATGGAGACAATGATATTAAATAACCCAACACTATATTGT
ATGTATATGTATGTATATGTTTACGCTAATATCGTCCCGATTTCAAGGGC
ACCTAGCTTGAAGCGAAACAGGTTTTACAATATTGCATGATATGAACGGT
GGGATGACTGGTATTGGGACGGATTTCAGCCTTCTACAAAGGATTCACCC
CGTCAAGACAATCCGAACTCTTGTCAAGAGTGTGAGTTACGCATCACGGG
TCATTGTTCTTTAAGTTAGCAAACACCTCCGCAATCTCGAGTATTTAGCC
AGCAAACTTGGACCAAAACACGTACACAATATGCGGTTCAAGCTTTTACT
ATTTCATTAATGACGTATAATGTTCTAGTCTGAACCGACAGACTATTAGA
CGCTTCAAGGCTATTAATTTCGGAAAGTCATTGCACCCTTATGGTCGAGA
CAATTCGGATTGTCACAATCCGGCCCCTGACAAACATTTAAATACATTTT
GGACGCGCTTTGACCATCGTGGTCAAAAATGCTCAGGCGAAAGACAAGAT
AACTTGTCTTAATAAAAGAAAAGGCCCTTGGCACTTGTTATGATGAACCC
AATCTACTTCCTGTGCCCTGTAAAACGTTATTCCCTACCCGTACATTATC
TACCTGGGGAAAAACGTGAATGTCCCGCGTGTAAAAAGCCATTTCCATAC
GAAAACCCTTTTATGCATTGGCTGGACAACCGACCCAAATCTTGGATTCA
AAATAGGGTGCCCAAATGAGGAAATTTTAGACAAAATAACCGTGTGCCAA
ACAGAAAAATTCCTCTGAGGTGCCAAAACGTCCAAATTTCGACTTTGGTA
CAACAATATCAAATAAAAAGTGCTGACCCTAAGAAATAGTCATAGTCCAA
TAATGAACTTTTCTCCTTTTACGTCAATTCCAGAGCGGAACCCGAAATGT
GAGTCCACAAAGTGACATCACGGCTAGAAAAGTGCCCGATTTTTATGACG
CTTGGGGCCGACAGTGCCGCAGGCATTGA

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