snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1, snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1
Unique Namesnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold152_size304267supercontigscaffold152_size304267:138868..143678 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein DAPPUDRAFT_55135snap_masked-scaffold152_size304267-processed-gene-1.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1572snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1572Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1573snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1573Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1574snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1574Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1575snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1575Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1576snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1576Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1577snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1577Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1578snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1578Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1579snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1579Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1580snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:exon:1580Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrsnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrsnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utr-2001251Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrsnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utr-2001252Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrsnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utr-2001253Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utrsnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:five_prime_utr-2001254Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cdssnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cdssnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cds-2001256Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cdssnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cds-2001257Tigriopus kingsejongensisexon
snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cdssnap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1:cds-2001258Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2001259auto2001259Tigriopus kingsejongensispolypeptide
Tk10106Tk10106Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10106

>Tk10106 ID=Tk10106|Name=Tk10106|organism=Tigriopus kingsejongensis|type=polypeptide|length=374bp
LAVLQNTFCTNKYILFSLVLTLSRSLVVRLCRRSIQPSKFGVMSELEFPF
TFQDPSQDHREAKLKVFGEQSLELHDTQVMPGRVFMPKSYAEKAQRIYNL
DVRPDDIWIVTYPKCGTTWTKETMWQIVNYDLTTTDHHFRRTPFLELEFL
NKTGRMARGESEAGDRGPPPQISASVDFMDALPSPRVVMTHIPLDMLPPN
LLDVCKVVYVCRNPKDACVSYFHHYQTSPNIYKIHGTFEDHAELFMAGRP
LFGDYWSHMKKAWKLRNHPNLKFLWYEDMKRDHTQVLRDLCTFTGHTRSE
EQISALVQHLTIDSMRQKAVDAAQSDSDKEFATKFHRKGQVGDWHNYLSG
PLLERFDQWIAQSLEGTDIAIPSH
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mRNA from alignment at scaffold152_size304267:138868..143678+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1 ID=snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1|Name=snap_masked-scaffold152_size304267-processed-gene-1.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4811bp|location=Sequence derived from alignment at scaffold152_size304267:138868..143678+ (Tigriopus kingsejongensis)
GCACTCAAAGGCTGCCAATGACATGTCACTGGACTATCTCGGATGATAAA
AAAATTCCTCAGTCAGTCAAAATCATGGCGTCTGTGAAGCAGCTTGAGTT
TCCCTTCCAATTTGAAGAGCTGGATAAAGCTCATCTTGAGGCTAAGAGGC
GTGTATTTGGTCCCAATACCAGCGAGCTCAATCTGGTCAAAACCATCCCA
GGTACGCATCCTAATACGCTTCATGGATTTCACCATATCAGGATGAATCA
CTGAGTTCGAGGTCACGCGAATGTCTCTCCATTGGTAAGCGCCCAAACCA
ACCAGACTAGAAGGCTTACTTACTATAAGTGGTCACATTGAATGATGTCA
AAAACAAGGGAAAATAAAAAGACAAAGTGAAAAAAGCAAAATATTACGAA
AAATGGACTTTAATTGGGAAGATTCCCTCCCTTCAAAAATGTAAACCGTT
CAAAATCAAGTGGAAAACTTTCCAAAATGTTAAAACAAAACATCTTAGAC
CAAGAAATGTCCAAGAAACAAAAGGATCGGAGCTGGAACATATTTTTTGG
CAAGTTACCTTGATGTGTGACAAATAACATACCGTATCAAAATAGAAAAA
AAACAGTGCAAAGAAAAATTTCCCCTGAAAAAGCTTGATTTGGCCAAAAA
TGGGCGTTCTTTTTTTTGAATGATTTTGACATATCCAGTCATTTTCCACT
TGCTGCTCCTGTGGTCACTGAATTAACTACTAGTCTCGTTGGTTTGGATG
CTTTCAAATGGAAGGATAATCGCGTGACCTCGAATTCAGTGATTGCTCTT
GGTGTGTGTAATCGCACCTTCCGGAGGTTTCGGAGAACACGGAACACCAT
GGAACCACCATCGTGAACACAGGGCCCACTGATGTTATTAGCTAATTTAG
CTAGTCGCCGTGCAGCCCCGTACAATCCAGCTCAAAGCACTACTTTAATT
TGTGGGGAACCAGAAGGGACCTTGCCTCGAGATGTGGCCGCACCTGTTTT
TCCTGACCTTTGAACGACTAAGGTTACAGGGAGTCGTCATTCACTCCCCT
CAGTAGAAGAAAGTCTGGAGTGGCAAAAATTTCTTTATCCGCCTGGTCCG
GGAATCGATCTGCGGCCTTTTAGCACGACATACTTTTTCGCTGACCACTT
CACCATTCAATCTCCATCACTGAATAAACTACTAGTCTCGTTGGTTTGGA
TGCTTTCAAATGGAGGGGTAATCGCGTGACCTCGAATTCAGTGATTGCTC
CTGGTGTGATGAAATCCAAGCCTAAATCCAGTCTTACCGTACATACCTGA
GAATAACGACAATCCACGAATTATTCAGGTGGCAACTTTCTGCCCAAGGC
ATTTCAAAAGCATGCCCAGAGAATTTACAACATGGAGATCCGTCCGGACG
ACATTTGGGTCGTCACTTTCCCCAAATGTGGAACCACATGGACCCAGGCG
AGTCTCATCCGCCGACCAATCCATGGAAGTATCTGTGAGCTTGATGGGAA
TTTGGGCCTGTTTCTAGGAAATTATGTGGAACATGGTGTTCATGGATTTC
GACGATGATCGCGATCTGTTCGCGAGAAGTCCCTTCTTGGAAATGGACTG
CATCATGCAATCCCAGCCTCCACCTCCTGGCTCCAATGAGCCTCCTCCCG
AGTTCCTGATTGATTCCATTGGCTACACCGAGCGATTGGCATCGCCCAGA
GTCATCAAAACTCACCTCCCATTTTCCATGCTGCCTCCCAAACTATTGGA
CACTTGCAAAGGTAGAGCCAATATGGACCACAATGGCTGAAGAATGTCTA
ATTGAGGCTACTCTTTCAGTCATCTACATCTCGAGGAATCCTTTGGATGC
TTGCGTCTCATTCTTTCACCACGCCAAGAATGGACAGCACTTCTTCCAAT
TACACGGATCTTTCGAGGACTATGCCAACCTGTACCAAAATGGCCAATTG
GTGTTTGGCAACTATTGGGATCATCTCAAGGTATTTGGGTTGGATCATGA
AAAGCCCCCCTCCCAAAAAAAACGGGTCAAACTTAAAACTTAAGTTTTCA
CATGTTGCCCGTTTGGATAAAACCACATTCTTGTCGGGTTTTTTCCTCAA
TGTGACTTGTGTTCAAGTTTTTACACGTTTTTTTTAGAGAACTTCATTTA
TTTTCAGATGGCACCAATTATTTTCTTCTTTCGTTAAACCTCAAACTTTC
ACATGTTGCCCGTTTGGATTAAAAAGCATTTGTTTTTTCTTTAAATTTGA
TTTTTTCTTCATTTTGCTTGTTCAAGTTTTTACACATTTTTTCAATATTT
TTCAAGAGCTTCATTTCGTTTCTTTCTTCATTGTTTAAAATTCAAGTTTT
CACATTTTGCCCGTTTGGATCAAAAAAAATTCTTTTTTTTGTCTAAATTT
GACTTTTTTTTGCTTGTTTCAGCCGATTCCATGTTTTTTAAGATTTTTCG
TGACCTTCTTTTTTTAGGCTAGCACAAATCATTTTCTTTTTTCCCGTGTA
CTTGACATGCTTCATTGAATTATGGAGTTGGTGTTTTTTAAGGCTCTCAG
CCCAAGTTCTCAGTTAACTTGTGATTTTTGGCTTAGGAAAAATCAAGCTC
TAGTGATTTTTTGCATTTTTCGCACACTCCAGTATTACTATCTTTTCTTT
TTATTGCCAATTTTTCTTTTTATGATTGTATTCACACTTGAAAGCAACGG
AACAGGAAACAAAATAATCACTCTTTTTCCTAAAAGAAACTTTTTTCGAC
GTTCTCATCACTTTTTTAAGCCCTCGTTATTAAAAATTGTGGGTGATATA
CTTTGAGGGACATATTTCTCGTCCGTTGCAGATGGGTTGGGCTCTGAGGG
ACCACAAGAACCTCAAGTTCATGTGGTATGAGGACATGCAGCGAGATCTC
TTGACGGCTTTGAAAGAGCTCTCGACATTTACTGGATCCAATCGGTCTGA
TGTGGAGTTGGAACAGTTGCGGGATCATGTGGAAATTAAGAACATGAAAC
AACGTTCCGTGGATCGGGCTAAAAATGATCAGGAAAAAGAATTCAACTCC
ATGTTCATTCGCCAAGGTGGCAGTGGAGGATGGGGAAAATATTTCAAGGG
TTCCATGCTGGACCAATGGATGCAATGGATCGCTGACAACACTTCAGGAA
CGGATATCAAACTCCAATTGAATTGAGGAGCCTTGGATCATAAACAAAAA
ATAAGCAAATGAAGAGGGGCCAAGGAACAATAATTCGATCAAATGTGTAC
TCTGCACCCTCTGCTCTTCAGTGCATTGTGTACATAGGTACGCTAGATAC
TCGTACATACACTATCTAACACCACTTGTACGATTGGAGGTAGTTTTGGA
ATGGTTCGGGGGGTGACGCTGCACGAACAGTCCTTTGTTACATAACTGTC
ATTCTGGCCGTCCTTCAAAACACGTTCTGTACGAATAAATACATTCTCTT
CTCACTCGTGTTGACGTTGTCCCGTTCTTTGGTCGTTCGTCTGTGCAGGA
GATCAATTCAACCTTCAAAGTTTGGCGTCATGAGTGAGTTGGAATTCCCC
TTCACTTTCCAAGATCCCTCCCAGGATCATCGGGAGGCCAAGTTAAAAGT
CTTTGGAGAGCAGTCCTTGGAGCTCCATGACACTCAAGTGATGCCGGGTG
AGGTCAATGACACGAAATCTTAGCGGCTCAAGCGATTTACTGAATGGAGT
TTAGGTCGAGTTTTCATGCCCAAATCCTATGCTGAGAAGGCTCAGAGGAT
CTACAACCTGGATGTGAGGCCGGACGATATTTGGATCGTGACCTATCCCA
AGTGCGGAACCACATGGACCAAGGTCAGGCTTAATCTTATTTACTTCCCA
GAGGCCGGTTCGTCAATGGGATCTTGAGCATATTTATAGGAAACCATGTG
GCAGATTGTCAACTATGATTTGACCACCACAGACCATCACTTCCGGCGAA
CCCCTTTTCTGGAGCTTGAGTTCTTGAACAAAACCGGGAGGATGGCCCGA
GGCGAGTCGGAGGCTGGAGATCGTGGGCCTCCACCTCAAATTTCGGCCTC
AGTGGACTTCATGGATGCTCTGCCCTCGCCCCGAGTAGTCATGACCCACA
TCCCACTGGACATGCTGCCTCCCAACCTTCTGGACGTGTGCAAGGGTACT
GTGTTCCATGTTCCAAAATGGACCCTCTGATTTCCATTTCGTCTCCCTGA
CAGTTGTATACGTATGCCGCAATCCCAAGGACGCTTGTGTGTCCTACTTT
CACCACTACCAAACTTCACCGAACATCTACAAGATCCATGGGACCTTTGA
GGACCACGCCGAGCTATTTATGGCAGGCCGTCCCCTTTTTGGCGATTATT
GGAGCCATATGAAGGTGAGGAGAGGATTCAAATTTAGAAATCCATCCGTT
CCCAAGAGTGTTCCTTCCAGAAAGCCTGGAAATTGAGGAATCATCCCAAT
CTCAAGTTCCTGTGGTACGAGGACATGAAGAGGGACCACACTCAGGTCCT
CCGAGATCTCTGCACCTTCACTGGTCACACCAGATCCGAGGAACAGATCT
CTGCCCTCGTTCAGCACCTGACCATTGACAGCATGAGACAGAAGGCCGTA
GATGCGGCTCAGAGCGACTCGGACAAGGAGTTTGCTACCAAGTTCCACCG
CAAAGGCCAGGTGGGAGATTGGCACAACTATCTGAGTGGTCCATTGCTGG
AGAGGTTCGACCAATGGATTGCTCAGAGCTTGGAGGGAACAGACATCGCC
ATTCCCTCCCACTAATGGAAGATCATGTGCAACCACAATTGAAATAAAGC
TATATCTCTCT
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