snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1, snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1
Unique Name	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold172_size289735	supercontig	scaffold172_size289735:7624..17709 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PREDICTED: uncharacterized protein LOC103459387	snap_masked-scaffold172_size289735-processed-gene-0.0	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:487	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:487	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:488	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:488	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:489	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:489	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:490	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:exon:490	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds-1957611	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds-1957612	Tigriopus kingsejongensis	exon
snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds	snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1:cds-1957613	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1957614	auto1957614	Tigriopus kingsejongensis	polypeptide
Tk06511	Tk06511	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold172_size289735:7624..17709+

protein sequence of Tk06511

>Tk06511 ID=Tk06511|Name=Tk06511|organism=Tigriopus kingsejongensis|type=polypeptide|length=370bp
MPPKTSGKAAKKAGKAQKSIAKGDKKKSRKRKESYAIYIYKVLKQVHPDT
GISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLL
PGELAKHAVSEGTKAVTKYTSSNLCAHGDVVLALTQDPTHQIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNL
CAIHAKRVTIMPKDIQLARRIRGEQPIVIFGGCCVYFFLGAPRFLGEVFL
AGVFLAGAAFLTAGFFLGVLGFLATTAGFSTFLVAAFLAGVFFLGDLAFF
SPATFLVAVFFLGVLAFLGLTTLVFSTLTAVGILKEPEAPVPLGWVSFFF
STKDLTAFLMKWAFLATSTL

mRNA from alignment at scaffold172_size289735:7624..17709+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold172_size289735-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=10086bp|location=Sequence derived from alignment at scaffold172_size289735:7624..17709+ (Tigriopus kingsejongensis)
ATGCCTCCCAAAACCTCCGGAAAGGCCGCCAAGAAGGCCGGCAAGGCCCA
AAAGAGCATCGCCAAGGGCGACAAGAAGAAGAGCCGCAAGCGTAAGGAGT
CCTATGCCATCTACATCTACAAGGTGCTGAAGCAAGTGCACCCCGACACC
GGCATCTCCTCCAAGGCCATGAGCATCATGAACTCGTTCGTCAACGACAT
CTTCGAGCGCATTGCCTCCGAGGCCTCTCGTCTGGCTCACTACAACAAGC
GATCCACCATCACGTCTCGGGAGATCCAAACCGCCGTGAGGCTTCTGCTC
CCCGGAGAGTTGGCCAAGCACGCCGTGTCTGAGGGCACCAAGGCTGTCAC
CAAGTACACCTCCTCCAAGTAAACGCTACCAACTACCTGAAAAATCAAAT
AGGCCTTTTTTAAGGCCAAAATTCAATTTTGTTTAGAGATACCCTAATTG
CCTAAGCTAACTCTGTCGTTTACCGGGCTTTGTTGAGCTAAATATCCTGT
TAAGCAATAATGTTGGTTTTTCTTCGAATTTCTTTGAAAACACATTGTTC
AAATATGTCTGATTTACTGCTTCCCGAGGATTTCTATGCTTAGTTCGACC
ATATGTTTTTCTCCAGCTCGGAACTCTCTTTTTTTACCTGAGAGACAAAC
AATTTTTGCTTGGTTCGGAGAATTCTTCCATTTTTTGGGAATTAGATTTA
AGGATTGGGAAATTCCAAAAAGGCAGTAAATTTGAGGAACTTTGACCATG
AAGATTAACAAAAAAAAGTTAGAGGAAAATCAGATAGTCTCAAAATCACC
ACAAAATATATTTCTGCTAGAAGTATAACATCTCCGTTACGTAATGATTC
ATTACCTAATGAGGGATTACTTTGCCAACCTTAAAATCGTAATTTAAAAT
ACATTAAACCACACCGATTTCTTAAGAATTTGACTATGAGACACAAATTA
CCCCCATTTGGTACAGAAACTGAACTAACCCAACCCAATTCACTTTGTCT
CGCAACAAGTTTTGCTTACGATGTACGTTTATAAATTTCGTGAGGAATGC
TCCAGGATGCAAGTAATAGGTTACAACGGAGATAAAACTTCATCATACCC
GATCACATTGACCATAAATAGACCCAAGACAAAAGCAGGCCAAAATCGAT
TGTGTAACTTATCGATGTAACACCAAAAATTGCCGAAATGGCAAAGAAAT
GGATTGATAGCTCTTTTTGGAATTTTTGAGTCATTTCTACTTCTATGAAA
TACTTGTTTGTAACAAACGTTTATCGAATGTGAGTTTGATTATGCAAGGG
TGAGAGATTGGATGAATGGCAATGAAAAAAGACGGGATGGGTGGCACTGA
TAAAAGATAGGATAGATGCACTGATACACAATAATTGTGGCTGTTGAGTG
TGAGACGTACAAAAGCGAAAAAAAAACCAGCAGAATGAATCTAGATCCTA
ACTCAATTGAAGAACAATATTGATCTGAGTGTAGAATTCTGAATGTAGAG
CCCCGCCGTTGGTGTCGCAGTGTGTGTGTGTGTGTAATCGTTTATTTCCT
ACATATAAGAAATAGGTTTATTTGCCCCAGAGTCAACACTTAGCATACGA
ATACTAATCAATAGTGTTAGGGCCATTTAGGGTATATAAATATACACATT
AAGTAGTAACAGAAACAGAACAACATTGGAGCAAACTATACAAAACAAAA
CAATAGTACAATAGGAAAAAGACAATTTATGTTTGCCAGCCAATACAAAT
CAATAAATGTTTCTAACAAACAAAACACACAAGAACTAAACAATACGCAA
TAAATGCTAGCGAAACTTAACCAGACAATGGTTGGTTACAAAACTATAAA
ATTCAAACTGAGAAAAATCGTACACATTAGAATACAAAAGGCAAACAATA
TTTTCTAATGTGTACGATTTTTCTCAGTTTGAATTTTATAGTTTTGTAAC
CAACCATTGTCTGGTTAAGTTTCGCTAGCATTNCATTATACCCCATGCCA
TCTCGTGGGTGGGTTATGTGGGTGAAGATGGCAAAACAATCACGGCGATT
CTGACGTGTCAAAATAATATTTCACTCAATGCCGAAAATGCCTTCTTAGG
TGTGGCTTCTCCGGCCCAAACTGATCTAATAGCCATCACCAAAATCTGCG
AGTGCCTACTGGGTAAAGTGTTAGGCAACGTGGACATTTTTGTACAAAGG
AAAGTGGCCCTGAGCGAACTCCAGGCCAAAGCAACCTCCTCCGTTGTAAC
GCTAAACTGACACAAGGTTCTCAACACACTAGCAGCCTCGGCAATAAGGG
TGAGGATTATCCTCGGTTCGCCCACGATGCACCCTCACCTGGTTTCTGCC
AATTTAAATGCTCTTCACAGCGGCCTGGGAGAGATGCAAGGCCCAGAGCC
TTTTGTGCCTACCTCATTTGCACACGTGAAAAAAAAGCAATTAAATCATT
TTACCTCGATCTGTGGGGTAAGAAATGGACGTCTACCCCAAGTTGCCGAC
AAACCAAATTTTGGTTTCCAGTCCCAAACGAAAAATTAGTCAGAGATGTT
CTAGCTCTTTCTAAATCAAAATTATCCCGGTTATTCCCATGGTTAACTGG
ACACTGCGATCTGAAATACTTCGGGTCGATAAAAACGGGGCAGGCTGCAG
ACCAGTCCTTTTGCCTTTTGCCTTTGTCCTTACCCAGACCTTTGCGACAG
TGAGGAGGAAACTCCGGCGCATCTGGTTACTTCCTGCCCTGACGTGTCTC
ACCTGTGGATCTCGGTTCGCTATGGGACAACCATATCCCCCAACTGGAGA
CCCGAGTTCGTTCTGGTCAAATCTGACCAAACCATGGGCCTACTCAACTC
CTTGGGGATTAGATAAAATTAAAACGGAATGTTCAGGTCGAATATGTCTC
CTAAAGATTTCTCACTGAAGTTGACCCTTTCATGACCTTCATTCAGGGCC
TACAAAACAAAACAAACAAACTAGCTTGTAATTTTTTACCTTTGCAAATA
ATATTTGTTCAAAATAGCTTATCCTTATCTCTACTCTTAGCTCTATTGAA
GTGAAAGCATGACAAGAAATATATCCAACACTAGCAAAAGATAATCTAAG
GGCTGTTCCCCAGTTTCTGGTGATGTTTTTTCACGAAGGGTTGCAGACAA
CTAACATGACGTTATTCATCTTGACCATAGACGACTTTAGTTAAACTGGA
CACACATTCTCACCCTGTCAGCTGATTTGTCGTTAGGTTGCTAACAGCTA
AGGGCAAAAACGGAGAATAGAGCAATACAAATGATTGCCGTGATCAAAAT
GTCTTCATGGTCTCAGCTACCTTAGATGTTTGTTGCTCACAAACTCAAAA
GTCGCTTCGTCGATCCTTGACCGGTTCGAGATGCAAATAGCTGGAACAAT
TTTCACCCTTGTCCGGATCAACTGGCACCTCAGCCCGGCTGAAATTGAAA
TAGGAATAACATAAGTTCTCACTCGTATTGCTTTTTTCAGCTCCTTGGTC
AGTATCGGGATCATAAAATATTTCCGTGGCTTGAGTTGAGTTGAGATAAC
CAGATTAAAAAAATGAGGGCTTCCCGGCTAGATCCTTTGACCCATGCTCC
TGGATGTCACTGCTAATCGGCTCAACCTGACACTCTCCTGGATGAGATGG
CTCTTGGAGCTAGTTTGAGATGACACAGTTGGTCATGACGGGTCAGATCA
CCTGAGGCCTCACTCGCTCATCTCTGCTTTCACCTGGGCCTAGTCGACTT
ACCCAGTCTTGGGCGTAAATCTGCTCCATGGCCTCGTTAGCGATGACAAG
ACGGGTAAGGGCAGGATGCATTTGCTCAAATTTGGGTGAATCTGTTCCAT
GGCCCGGGCCACCAGGCATGACGGGGACAAGTTGGGATCCCCGGTGGGGA
CAATCGGCACACTCTTGGGTGGTCTCTGTGGCTCTGATCGAGCCTGCACA
GTTTCAGAATACTTAATCCATGGATTGAGAAGGCCAGGTGGGTTGGTTAC
CTTTTAAGCTTAGGCTCCATATTCCCAGATCTTTGATGCATCTATTACTG
GGCTGGACTGAAGCGGACCCACTATCTGGTGTTTGGTGTAGAGCACAATG
CTTGAGAATGCTCTTTACGTATATTGGATAAAGTTTTCACCATCACATTT
AGGCTATTAAGTGTTTTTTAGGCACTTGATTACTGTACAGTATATAGATA
TGATAGCCTAGATCGGCTGTTTTTAGCCCAACTGCTGCGTTTTGAATTTT
TAGCCTCTGTGCCCATGGCGACGTCGTCCTCGCCTTAACCCAAGATCCCA
CCCATCGTAAGTTAAACAGGTTCATCATGCCCTCAGATAGGAGTCTCTAC
CTAAAAATGTTAATTCAGGGCGCTTTGCGAAATACCCCAATCATCTTTGG
GAAAAATTGCCAAGATGTTGTTGACAGCCTTCTTGTTGATCGCTTGTCCC
GGCTCAACTCTCACACTCCTCACCGCATCTTCCCTACGCAGCCAACACCC
TGGTAGACAACGGAATCGCCATGTGGAATAAGTTCCCAGCCCTGCGAGAA
GCCAGTACCAAGCGGATGACTTCAAGCGTGGCCAAGTCAATATCTAGATC
GGCCCCCATATGATCGATGTTATTCAGTTCTGTTTTGGGCTGATGTTGGT
ACCTCCATTTGTACGATTTTTACGATATTTGCGCTTTTTATTCTTTAGTG
CCTTTTGTTGAGTTTAATTAGTTGTTGCTGTCTAAATATTGTTTGCCTTT
TGTATTCTAATGTGTACGATTTTTCTCAGTTTGAATTTTATAGTTTTGTA
ACCAACCATTGTCTGGTTAAGTTTCGCTAGCATTTATTGCGTATTGTTTA
GTTCTTGTGTGTTTTGTTTGTTAGAAACATTTATTGATTTGTATTGGCTG
GCAAACATAAATTGTCTTTTTCCTATTGTACTATTGTTTTGTTTTGTATA
GTTTGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNCTCCAACTGCTCCGTCTCCCAGGACCA
TTGTCCGCTTGGCGCCAATAATCTCAGCGAGGGGTGAACAGAGAGACTGG
AGATTCCCAAAGGCAGCAATATCCATTAAATGTGTTACAAATTACATTGC
TTGCGCACATACTAATAGATGCTACACATATAATGTTAAATCCCCTCTTA
AATTGGCCAGCCCGTGAGTTTTCACTCTACAAAGTCCACAAGGTTCGTAG
GGTTTTGAACTTAACGTGCAGCCTGTGAACGAGACACTGCTTATAAAAGC
CCTGGGAACGCTTCTCTTGCCATCATTCTCTTGTTGATCTCACAAGCATA
ATGGCCCGTACCAAGCAAACCGCCCGTAAATCCACCGGAGGCAAGGCTCC
CCGCAAGCAGCTGGCCACCAAGGCTGCTCGCAAGTCTGCTCCCGCTACCG
GTGGCGTGAAGAAGCCCCACAGGTATCGCCCTGGTACCGTGGCTCTCCGA
GAGATCCGTCGCTACCAAAAGTCCACCGAGCTGCTCATCCGCAAGCTGCC
CTTCCAGCGTCTGGTCCGTGAGATCGCTCAGGACTTCAAGACCGACTTGC
GTTTCCAATCGTCGGCCGTCATGGCTCTTCAAGAGGCCTCCGAGGCTTAC
TTGGTCGGCCTCTTCGAGGACACCAACTTGTGCGCCATCCACGCCAAGCG
AGTGACCATCATGCCCAAGGACATCCAGCTGGCCCGCCGCATCCGTGGCG
AGCGTGCTTAAATTGCTCTTCGAAACATTTCCAAACAGGCCTTTTTAAAG
GCCAAAACTTATGTCCGTCAGAGTATATGCAAAGCCTAAATCATTTTAGA
GGAGTTAAATTAGTTGTAATTTTCATTTCTCCTTTTCATCTGATAGACAA
ATGAAAAGATTTCAAAGGATAAATATAACAAAGTAAATTATAATAGGTGA
GTCTATACATACAATGGAGCTTATTCTGTTTGTTTGTCTCTTGAACGTTT
TTCTCAGGATCGGCGGAATAGAGAGAGCTGATTTTTTTCAGACGAACTCA
AAATCACCCCTGACGTGTACCTAGCTTTCTTGAATTTGTAAGTTTGCATA
CCTAACAACTTAAAAATGTGTTATAAAATATTTTCGGCGCCATTTGGCCA
CGACGGGCGCGATATTCGAAATGCGCCGGAAGCGAAACTCGGCCGAAGGC
TTGGAATTGCCCGAAGGCCCCAAGGAATCAGGGAAAAGACACCCGTAGAG
CAACCTTTTTTGCTAGTGACGAAGAATTGAGCAATTGGATCCTCTAAAGA
TTTTTACCAACATTTGGGGATTTCAAATATTCCTTCCAGTCCTCATATAC
TGTACTTTTTGAAATTGTAAAAATAGTTTTATTAATTTCCTATTAAAAAA
GCACTAAGCTGTTCTTGAGAACAGTCCCTATTATATGATCATTTTAATTG
TTCACAATATATGTTAGTCATTTTTTAAGGCTAAATGTTATGTCTAGATC
GGCCAATTTATGTTTAGTGCTAAAATAGTATTTTCGTCTTTGACGATGAG
GGAGAACAAGCACGTCATTGAAAGCACTTTGTTACTTTTCAAAGATGTTG
CTTGTGGATTACTACTGCTCGACTTCCATCTTGTTAAATATTGTTGTATT
TAAAAATCTGTTTCATATTTATGACGATATGGTTATTGCTTAGTATGCTA
CCTTGGTAATGATTCAATTACTCAATGGTTCTAACGGTATCCTTTCATGT
AAGCTATGAAATATCTCGTGTAAATTCATGTTCTGGCTCTGAAAAGAGCC
GATTGTAATTTTTGGTGGATGTTGCGTTTACTTCTTCTTGGGTGCTCCTC
GCTTTTTGGGGGAGGTTTTCTTGGCTGGGGTCTTCTTGGCTGGCGCGGCC
TTCTTGACTGCGGGCTTCTTCTTGGGGGTTTTGGGCTTCTTGGCCACAAC
GGCGGGCTTCTCCACCTTCTTGGTGGCGGCCTTCTTGGCGGGAGTCTTCT
TCTTGGGAGACTTGGCCTTCTTCTCACCAGCGACCTTCTTGGTGGCAGTC
TTCTTCTTGGGGGTCTTAGCCTTCTTGGGCTTGACCACCTTGGTCTTCTC
CACCTTGACGGCAGTGGGGATCTTGAAGGAGCCGGAAGCACCAGTGCCCT
TGGGTTGGGTCAGCTTCTTCTTCTCCACCAAAGACTTGACGGCCTTCTTG
ATGAAGTGGGCGTTCTTGGCCACATCGACCTTGTAG

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