snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1, snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1
Unique Name	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1912_size25034	supercontig	scaffold1912_size25034:13034..17578 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
hypothetical protein DAPPUDRAFT_215551	snap_masked-scaffold1912_size25034-processed-gene-0.4	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:exon:1231	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:exon:1231	Tigriopus kingsejongensis	exon
snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:exon:1232	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:exon:1232	Tigriopus kingsejongensis	exon
snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:cds	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:cds	snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1:cds-1961025	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1961026	auto1961026	Tigriopus kingsejongensis	polypeptide
Tk11193	Tk11193	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold1912_size25034:13034..17578-

protein sequence of Tk11193

>Tk11193 ID=Tk11193|Name=Tk11193|organism=Tigriopus kingsejongensis|type=polypeptide|length=122bp
MSDGWAAYRQTSSIEGANYSHSVIIHEHNFVHPEDPNVHTQQIEDDAMGE
EDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSG
AVGGATDADADLQARLDDLRRE

mRNA from alignment at scaffold1912_size25034:13034..17578-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold1912_size25034-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4545bp|location=Sequence derived from alignment at scaffold1912_size25034:13034..17578- (Tigriopus kingsejongensis)
ATGAGTGATGGGTGGGCTGCGTATCGCCAGACCTCGTCGATTGAAGGCGC
TAATTACAGCCACAGCGTCATCATTCATGAGCACAACTTTGTACATCCCG
AGGACCCCAATGTGCACACGCAACAAATTGAAGGTTGTTAGATGCTCCTA
AAGAAGAAGCTCAAGTATCAGAGCGGAACATCCAGCGAGCTCATGGGCTC
CCATTTGAGCGAGTTCCTATGGAGACGAAAGTTCAAGGACGTGAGGCCAT
TTCATGCGTTCCTCTATTGTGTGGCCAAGTCTTACCCCGTCTGATGCCAA
TTCTTCTTCAGGAGCATCCTGTTGCTCTCCATGTGGTCCTACCCGATCTC
CAACTACCAGCTCTCAAGTACAGACATCACCAGTTCACCCCGGACATTGG
AGGCACCTTTCCCACCTGATCGCCATTGAGCTTGGAACCCGCCCGATCTC
CCTTTGGACACTCCCGACCTCCAACGGGGACCTGCCCGACCTCCAACGGG
GACCTGCCCGACCACTAACGGGGACCTGCCCGACATCCCTTGGGACTTGC
CCGAAATCCCGTGGGACTTGCCCGACATCCCTTGGGACTTGCCCGAAATC
CCGTGGGACTTGCCCGACCTCCAACGGGGACCTGCCCGACCACTAACGGG
GACCTGCCCGAAATCCCGTGGGACTTGCCCGAAATCCCGTGGGACATGCC
CGAAATCCCTTGGGACTTGCCCGAAATCCCGTGGGACTTGCCCGAAATCC
CGTGGAACTTGCCGGAAATCCCGTGGGACCCAAAGAATTCCCGTGGGACT
TGTCCGAAATCCCGGGGGACTTGCCCGACTTCCCGTGGGACCCAAAGAAT
TCCCGTGCGACACGCCTAAAGTACCAAACCAAATCCAAATCCAATCTAAA
CCAAATTTCCCAAAAGTTCCCAAAGCCAATTAAAATACTGTGCAATAAAA
ACTGTTGCAATAACACATTTCTTTCATTGACGTTTTACTGGTCAACTAAG
ATAGCGAAGTCGGTATGCCAAATTATGAACAATATTCCATTCCTTGAATG
TCACAATATTAATGCAATTGCAATCATTTCTTCAAAACGAAGGATTTTCT
TTCTAATCAAAAGAACTTGGTTGCATAGTCGAACTGGTTTTTTTCCTGTG
CATTTTGTCTGTTTCGAGTTGAATCATTCACAAATCCAAGTCATTTATCT
GGCCAAGGATTGGATGGTCAATGGGAAGGGGGGTCCGGGCCCCCCTTCCC
ATTGACCATTGATATTCTAAACATTTTAAAGAAACCCCATTGTCCCAGAA
AGCCATCTAAAATTAGAAATCGTTCGATACAACAAACAAACGCAATTCGT
TTGTCAAATATCACGCAACCTCGGCACTACACACAGTTTACACCCACACG
ACAAAAGAATTATGTTCCTCACGCCACAAGGAACCGTTTGAGTGTTCCTC
GACTTCATTTGACAATCTTATATTTGTCATTGTTTAATGCAGTGAGCCAT
GATGCCCAGTTACAAAAGCCAGGAGAACATTAGTTATCAAAAAACACTAA
GATAGATTTGTTGTGTATACATCTTTGAAGGTAATCGTCCCACGGGATTT
CGGGCAAGTCCCACGGGATTTCGGGCAAGTCCCACGGGATTTCGGGCAAG
TCCCACGGGATTTCGGGTAAGTCCCACGGGAGGTTGGGCAAGTCCCATAG
GATGTCGGGCAGGTCCCCGTTAGTGGTCGGGCAGGTGCCAGATGGAGGTT
GGGAGTGTCCAAAGGGAGATCGGGCGGGTTCCAAGCTCTATGGCGATCAG
GTGGGAAAGGTGCGGGGTGAACAACTGGTGATGTCCGTACTTGAGAGCTG
GTAGTTGGAGATCGGGTAAGACCACAGGGAGAGCAACAGGATGCTCCTGA
AGAAGAATTGGCATCAAACGCGGTAAGACTTGGCCACACAATAGAGGAAC
GCATGAAATGGCCTCACGTCCTTGAACTTTCGTCTCCAAAGGAACTCGCT
CAAATGGGATCCCATGAGCTCGCTGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGCCTTGACTT
CATCCAGTTGCGGAGATCCTTAGCTCTTGTGAACCTCTTGTTCACCGTGG
CAGCACTGAGTAACTGGCGCTTCTGCAGACAATAAGTCTTCATCTTCAGG
TCCTCCCTGACGATTTTTCTCAAGGACTCCCGTCCTACTCCCGGCCTCCA
AGGCCATTTTCCGGATGGACCTCCTGGGGTTTCTTCGGATTTTCTTCCAA
GTGGCCTCAATGACCCCGCGCGTCCGAACTGACTTTGATCTTCCACTTTT
GGGACGGTTTTGGAGTTGCCCAGTCTCCTTGAACCGCTTGACCGTGTTCC
ATACAGTGGTCTTGGACACTTTGAGGGCCGAGAGCTCCTTGACAATGGAG
CCATAGCTATTTCCTGCTTGGTATAGCATGATGATGGCCTCGCGCTGATC
CATGTAACTAGTTGTGAAGTGGATGATTTGGAAAATGTTTGTAACAAAGA
GTGACAACTACATTTGTGCGCATCATACGTCCTAAGAGTTTTTGGCCCTA
AATTCAAAGACTAAGATTCTATAACGTCCTAAACCTAGCGTTCCAAAACA
TACTGGTCACCCTGTATATCAGAATTTAACATTGCTCGCCTGTATTTTTT
TACAAATAAAACAACTTTCTTGTTGTAATAGATCTGTACTCATACATATT
AGCCTTGATTTCATCATTATAATATTCTTTTAGCCCTCCCGGTCTCGAAA
TGAGTTAAGATCATAACTTGGTGCGGGCCGGCAAGGATTTATGTGTCCTT
CCCGCCTCGGGCACAGAAAGCGCTGCCACTGCTCCTTCCAGGCGTCCATA
GGCTTGAGCTTTCCACTTTTTTCGCGCCCTTTTTACCATTTCAAGTACCA
CTCTCCACAACTTTTCTTGCTTATCTATTTGATTGATCGGTCTGGCTGGT
GTATTTCGCAAATAAGATCGAACTGAAGAAAGACGTTAATAAACTTTCTT
TGTCCGCAGATGATGCCATGGGCGAAGAAGATGATGAAGAGGAGTCGGAC
GCCGTTGTCAACCAAGTCTTGGATGAGCTTGGCCTCCAGTTGAACCAGGA
TCTGGCTGGCATGGCCGTGCCCAACGGATCCCTGGCCGTAGCCACGCCCG
GGGGTAAACAGGCCGTACCCTCTGGAGCGGTTGGAGGAGCGACGGATGCT
GATGCCGATCTCCAAGCCCGACTGGACGACTTGAGGCGAGAATAA

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