snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1, snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1923_size24897supercontigscaffold1923_size24897:7289..10046 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
abnormal spindle-like microcephaly-associated protein partialsnap_masked-scaffold1923_size24897-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:444snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:444Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:445snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:445Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:446snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:446Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:447snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:exon:447Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cds-1957596Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cds-1957597Tigriopus kingsejongensisexon
snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1:cds-1957598Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957599auto1957599Tigriopus kingsejongensispolypeptide
Tk01739Tk01739Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01739

>Tk01739 ID=Tk01739|Name=Tk01739|organism=Tigriopus kingsejongensis|type=polypeptide|length=494bp
MVQKQVRGWIVRRDYERSRSSVRVIQRAWRRFALIKRLEEQSEMRLRHQW
ATKIQSLWRMRMARREFAQIQASALEELKNYSAILIQSHWRGCVQRGKFL
RLRRTCIRLQALAKACIAQRRLVSMRESARIIQRAWRRHRLIRHLAELQK
YKVMTQSAITIQSLWRMHKARRHYRHLTHLAASAEMAGATIQRSMQMWVV
RKKFIRIRRAVTVIQKHYRGYQVRTAFKSDCKIKQTALLPDFPINEELSK
KIEEVRQKVFIANENATEDKKLGNRTALALDRLYRSRDIAHLLMILKDLD
VTTRFSANCCDQIMSENDRCVRILLNLLRRCNRSIPHMDIISTILDVFIN
LAKYEPSRMVLLEAADDVLETLIEVLVIYRDKSVDIYTKTFALLWLLASS
NRILTLPLNAKKLLESHKHYHRLHNKQMERGRRRNNYLPNSFRPSPAQAK
PKMPKLSLCPPWQIREDVIRHHKDPFLASEMVLNKLALKPLPLA
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mRNA from alignment at scaffold1923_size24897:7289..10046+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold1923_size24897-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2758bp|location=Sequence derived from alignment at scaffold1923_size24897:7289..10046+ (Tigriopus kingsejongensis)
ATGGTTCAGAAGCAGGTCCGAGGCTGGATTGTGCGAAGGGACTACGAGCG
ATCGCGCAGTTCGGTCCGAGTCATCCAACGAGCTTGGAGGAGATTCGCCC
TCATCAAACGACTGGAGGAGCAGAGCGAGATGAGGCTGAGGCATCAATGG
GCCACCAAGATCCAAAGCCTCTGGCGGATGCGGATGGCTCGTCGCGAGTT
CGCCCAGATTCAGGCCTCCGCCCTGGAGGAGCTCAAGAACTACTCGGCCA
TCCTCATTCAATCCCACTGGCGAGGCTGTGTTCAACGGGGCAAATTCTTG
CGGCTGAGACGAACCTGCATTCGGCTCCAGGCTTTGGCCAAGGCCTGCAT
TGCTCAGCGACGCCTGGTGTCCATGCGGGAGTCCGCTCGGATCATCCAAA
GGGCGTGGCGACGCCACCGATTGATCCGCCATCTCGCTGAGTTGCAAAAG
TACAAAGTCATGACTCAAAGTGCCATCACCATCCAAAGTTTGTGGAGGAT
GCACAAGGCCAGACGTCACTACCGCCATTTGACGCATCTGGCGGCCTCGG
CCGAAATGGCCGGAGCCACCATCCAACGCTCCATGCAGATGTGGGTGGTT
CGGAAGAAGTTCATCCGCATCCGGCGAGCCGTGACCGTGATCCAAAAGCA
TTACCGCGGCTATCAGGTCCGAACGGCCTTCAAATCCGACTGCAAAGTAA
GTTGAGCCCACAAATAGTACGAGGAGTTCGTCTTACTCTTCAGAGTTAGA
CGTCCTTTTGGCCTATGTTTCCGGTTAGAAGTCGAAGGAATTGAACACCA
CTTTTGATGAAATCGTCCCTTTAGCGAGGGTGAAGGCATTATTAGAGACG
ATGTCATCGCCAAGGCCGCCTTGATCTACAGTAGTCACACAATCGATTGC
CATATGTAATAGTTTATATTCATATTTACCCACAGATATACAGTTGGTAC
ATATATAATATGTAGATATACAGATGTACAGTATACGTTTTCATGAACAC
AGCTTTGAAACAAAAATTGTTGTCGGAAAGGGATAGTTAAGACTGTTGCG
CTAACATTGGAATTGTTTTAGTGTTTGAATGAGTCAATCTACTGTATTTA
CAGTAAATAAATACAAGACTCTACCTTGAGTAGTAAGATTGGCCAACATA
CGCCGTGATTGGCGTCCCGACATTGACTAAAGTTAACCCGAAAGGCTGCC
TAGTCGATCACTAATTTGACCCACAACATCATTGTGCCATGGCCAAAGCG
AATTGATCAATTCGCAGAGAACTCTTTTAACCACAAGTACGTAAAGCTGC
TTGTCTGGCATGATTTTAAAAACATTAGTAGCACAAGATCCAAAGCCTTG
CACATTTCCCCCTAGCTAATTGACCTAGCGCCAGACCAAGCCCGGGAAGT
GGAAGGCCAAATCTTTGGGGTTCCATAAGATGCCCCATGCTGATTACCTC
AGTTGGGTCAACCAAAGCCTTATGGTTAAGTTAGTCGTGGGAGTTCGTGA
CAAACAGGACTCGTATACGTACACAGTGATGGCTGTGTTTGAGTCTTCCC
TGGTTACTGAGTAACCAATGTTAAAGCTTCAACCTTTGACCTGAAGTTGT
GGGGATTCACATGATTTGGGATTGATTCCAGATCAAGCAAACAGCGCTTT
TACCCGACTTTCCCATCAATGAGGAATTGAGTAAGAAGATCGAGGAAGTC
CGCCAGAAGGTCTTCATTGCCAATGAGAACGCCACTGAGGACAAGAAATT
GGGCAATAGAACAGCACTGGCCTTGGACCGCCTCTACCGGAGTCGGGACA
TTGCTCATTTGCTCATGATTCTGAAGGACCTCGGTGAGTCATCGAGTCCC
ACCACCCAGACTGGTCTGGACCGGAGGGTCATGGAACGTATTCCCTCTTG
CAGATGTGACCACTCGATTTTCCGCCAATTGCTGCGATCAGATCATGTCC
GAGAACGACCGATGTGTACGCATCCTCCTGAATCTCCTGCGGCGATGCAA
TCGCTCAATCCCCCACATGGACATCATCTCCACCATCTTGGACGTCTTCA
TCAATCTGGCCAAATACGAGCCATCTCGGATGGTCTTGCTCGAGGCTGCC
GACGACGTCCTCGAGACCCTGATCGAGGTTCTGGTCATCTACAGAGACAA
ATCTGTGGACATCTACACCAAGACCTTTGCTCTTCTCTGGCTCTTGGCCT
CCAGCAACCGGGTAAAAAAGGTGAGAGCACACGCTAGACATGCTACCCTA
TTAGTATTGGGTTGCTGGGCATAGTAGTGCATAATTGTTTCGGTTGATAG
TGAGTCACTCGCCCAAGGACAACCTCGAACAGCTTGGGGTGGATTGGAGT
GCGAAATATGAATGGATGCGAAAGGCAATTCCTCAACGCCTCCAACAAAA
AAAAAGGGCACATGGGCGGACGGCCTCCCATCCTTCATCAGTTCTTGTCC
AAATGTACATGTCCATTTTTCTCGTCTAGATCCTAACCTTGCCCCTCAAT
GCCAAAAAACTCCTGGAGTCTCACAAGCATTACCACAGGCTTCATAATAA
GCAAATGGAACGAGGCCGACGACGAAACAACTACCTCCCGAACAGTTTTC
GGCCCAGTCCCGCCCAAGCCAAGCCCAAGATGCCCAAGCTCAGCCTCTGT
CCGCCCTGGCAGATCCGAGAGGACGTCATCCGACACCACAAGGATCCCTT
CCTGGCCTCTGAAATGGTCCTCAACAAGCTGGCCCTCAAGCCTTTGCCAT
TGGCCTGA
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