snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:1608860..1611116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
4-hydroxythreonine-4-phosphate dehydrogenasesnap_masked-scaffold1_size3401120-processed-gene-16.32Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:exon:1096snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:exon:1096Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:exon:1097snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:exon:1097Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1:cds-2021801Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021802auto2021802Tigriopus kingsejongensispolypeptide
Tk04903Tk04903Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04903

>Tk04903 ID=Tk04903|Name=Tk04903|organism=Tigriopus kingsejongensis|type=polypeptide|length=704bp
MTLLAPKIKPQLKPLLTACALACLIGSTSPVFAAVQLVDRVSVLVNDAAI
TEGELKQAMAQLRAQNRNAPADQLRKAAMEELIMISLQEQEAKRMGLSVD
NATLDRAMQSLAKQNKSNLTNFRKQVTASGMSWTELRESVRKQILLDRLR
DREVMRRINISDQEVDDYLQAQDATQGHPQYQLEHFVVPLPPNVDAKTKG
QAEAAVNALQRALDDKRSAEEIVAAFRRRNIPLEGGPLGWRNAADLPEPM
NKIVPELMTGASSEPVVDAQGIHVLRLLAVRLNKTNTVEQSSARHILLKL
NPLRDAEQARQELETLRKQILNGEDFAALAHKHSEDYASGVMGGDLGWFG
AGAMVPAFEEKLKLLTPGQISKPFETAFGWHNTLMTTNNAGPVLAICSGE
PAGIGPELCTRLEPLDGVKQVILADPELLQQRSADGLSPLPLYDPSRADA
ISVYPVPLRVPSTAGELNTDNAAYVLEILDIAARGCLSGEFSAIVTAPVH
KGVINDANIPFSGHTEYFAELCDATPVMLLVADDFRVALATTHLPLSGVA
QALTYEVLASRLRILHQDLQQKYGIEQPRILVAGLNPHAGEGGHLGREEI
EIIEPCLDALREEGLTLIGPLPADTLFTPPHLSNADAVMAMYHDQGLPVL
KFAGFGKAVNVTLGLPIVRTSVDHGTALDLAGTGKAKVSSLHAAVAEAIR
IVRR
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mRNA from alignment at scaffold1_size3401120:1608860..1611116-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-16.32-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2257bp|location=Sequence derived from alignment at scaffold1_size3401120:1608860..1611116- (Tigriopus kingsejongensis)
ATGACTTTGCTGGCCCCTAAAATTAAACCGCAACTCAAACCTCTTCTCAC
CGCTTGTGCACTCGCCTGCTTGATCGGCAGCACCAGCCCCGTGTTTGCCG
CTGTACAGTTGGTCGATCGCGTCAGCGTCCTGGTCAACGACGCCGCCATC
ACCGAAGGCGAGTTGAAACAGGCGATGGCGCAGCTGCGAGCACAAAACCG
CAACGCGCCCGCAGATCAACTGCGCAAAGCGGCGATGGAAGAGCTGATCA
TGATCAGCCTGCAAGAGCAGGAAGCCAAACGCATGGGCCTGAGCGTGGAC
AACGCCACGCTCGATCGCGCGATGCAATCGCTGGCCAAGCAAAACAAAAG
CAACCTAACCAACTTCCGCAAGCAAGTCACCGCCAGCGGCATGTCCTGGA
CAGAGTTGCGTGAGTCGGTACGCAAGCAAATCTTGCTCGATCGCTTGCGC
GACCGTGAAGTCATGCGTCGCATCAATATCAGCGACCAAGAAGTCGACGA
TTACCTCCAGGCGCAAGACGCCACACAGGGCCACCCGCAGTACCAATTAG
AGCACTTTGTCGTGCCGCTGCCACCCAACGTGGATGCCAAAACCAAAGGC
CAAGCGGAAGCCGCCGTGAACGCGCTGCAACGTGCACTCGACGACAAACG
ATCTGCTGAAGAAATTGTTGCCGCGTTTCGCCGCCGAAACATTCCATTAG
AAGGTGGACCTTTGGGCTGGCGTAACGCAGCTGACCTACCTGAGCCGATG
AATAAAATTGTGCCAGAGTTGATGACCGGAGCTTCCAGTGAGCCAGTTGT
CGATGCACAAGGGATTCACGTTTTGCGGCTGCTCGCCGTTCGCCTGAACA
AAACCAACACCGTCGAGCAAAGCAGCGCTCGCCATATCTTGCTCAAGCTC
AACCCGCTACGGGACGCCGAGCAAGCGCGCCAAGAGCTCGAGACCCTACG
CAAGCAAATCCTCAATGGCGAAGACTTTGCCGCGCTCGCTCACAAGCACT
CAGAAGATTACGCCAGCGGTGTGATGGGTGGCGATCTGGGATGGTTTGGT
GCCGGCGCCATGGTGCCGGCCTTTGAAGAAAAGCTGAAGCTGCTCACGCC
TGGTCAGATAAGCAAGCCCTTCGAAACGGCTTTCGGTTGGCATGTCATCA
AGCTCGAAGACAGAAGACAAGCCGAGGCCTCTTCTGCTGAGCGCCGCGCG
AAGGCACAGAATGCCATCGCTGAAACCAAACGCGCTAATACAACCCAGCG
CTGGCTGCAGCAACTGCGTGATCAGGCCTTCTTAGAATACCCTAATGACA
ACAAATAACGCCGGCCCCGTACTCGCCATCTGCAGTGGCGAGCCTGCGGG
TATTGGACCTGAGCTGTGCACACGCCTCGAACCACTCGACGGCGTCAAAC
AAGTTATTTTGGCCGACCCCGAGCTGCTGCAACAACGCAGCGCCGACGGG
TTATCGCCCCTCCCTCTCTACGATCCATCACGCGCTGACGCCATCAGTGT
TTATCCTGTGCCTTTGCGCGTGCCGTCAACAGCGGGCGAGCTCAACACAG
ACAATGCGGCCTACGTGCTGGAGATTCTCGACATCGCCGCCCGGGGCTGC
CTCAGCGGCGAGTTCTCGGCGATCGTGACAGCGCCCGTGCACAAAGGCGT
GATCAACGACGCGAACATCCCCTTCAGTGGTCACACCGAATATTTTGCCG
AGCTCTGCGACGCAACGCCGGTGATGTTGTTGGTGGCCGACGATTTCAGA
GTGGCACTGGCGACGACACATTTGCCACTGTCTGGCGTTGCGCAAGCACT
GACCTATGAGGTGCTCGCCAGTCGTTTGCGAATTCTGCATCAAGACTTGC
AGCAGAAGTACGGCATTGAACAGCCGCGGATATTAGTCGCAGGACTCAAC
CCACATGCGGGTGAAGGTGGGCACTTGGGCCGAGAAGAAATTGAGATCAT
CGAGCCCTGTCTCGATGCTTTGCGCGAGGAAGGTCTCACGCTCATTGGCC
CGCTACCGGCTGATACCTTATTTACCCCGCCCCACCTATCCAATGCGGAT
GCGGTCATGGCCATGTACCACGATCAAGGGCTACCCGTACTCAAATTTGC
GGGCTTTGGCAAAGCTGTCAATGTGACGCTTGGCTTGCCGATTGTGCGTA
CTTCCGTCGATCACGGTACCGCACTCGATTTGGCGGGCACCGGTAAAGCC
AAGGTCAGCAGCTTACATGCAGCGGTTGCCGAGGCTATTCGTATTGTCCG
CCGTTAG
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