snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:1744492..1744920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
3-hydroxyacyl- dehydrogenase domain proteinsnap_masked-scaffold1_size3401120-processed-gene-17.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1:exon:1101snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1:exon:1101Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021836auto2021836Tigriopus kingsejongensispolypeptide
Tk04906Tk04906Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04906

>Tk04906 ID=Tk04906|Name=Tk04906|organism=Tigriopus kingsejongensis|type=polypeptide|length=142bp
MTAVKQTPITVQKEIPGFILNRLQGALLNEAMRLAQGGYASVEDIDKAVC
DGLGLRWSFMGPFETIDLNAPAGLADYAKRYGPMYQDMAASQATAPDWDE
TAVAALDASRRVTLDRDTIAQRQNWRDDRLAALIAHKSKQEN
back to top

mRNA from alignment at scaffold1_size3401120:1744492..1744920+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-17.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=429bp|location=Sequence derived from alignment at scaffold1_size3401120:1744492..1744920+ (Tigriopus kingsejongensis)
ATGACGGCGGTTAAGCAAACGCCAATCACTGTGCAAAAAGAAATACCGGG
TTTTATCCTGAATCGGTTGCAAGGTGCTTTGCTCAACGAAGCAATGCGTC
TGGCACAAGGCGGTTACGCCAGCGTAGAAGATATCGATAAGGCCGTTTGC
GATGGATTAGGACTGCGGTGGTCATTCATGGGGCCGTTCGAAACAATAGA
TCTCAATGCGCCTGCGGGATTGGCTGACTACGCGAAGCGCTATGGCCCGA
TGTACCAGGATATGGCTGCCTCGCAAGCCACTGCACCTGACTGGGACGAG
ACGGCAGTTGCTGCGCTCGATGCGTCTCGGCGCGTGACTCTAGACCGTGA
CACTATCGCCCAACGTCAGAACTGGCGCGACGATCGACTGGCTGCGCTCA
TCGCTCACAAATCAAAACAAGAGAACTAG
back to top
Add to Basket