snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:237451..238562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ubiquinone biosynthesis proteinsnap_masked-scaffold1_size3401120-processed-gene-2.22Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:exon:1009snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:exon:1009Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:exon:1010snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:exon:1010Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1:cds-2012630Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2012631auto2012631Tigriopus kingsejongensispolypeptide
Tk04854Tk04854Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04854

>Tk04854 ID=Tk04854|Name=Tk04854|organism=Tigriopus kingsejongensis|type=polypeptide|length=352bp
MPRPTEIRLQQKSRQLVLGFDNDFNCTLSCEYLRVHSPSAEVRGHGVGQE
VLQVGKEQVNITAVEPVGNYGVKLIFDDGHDSGIYSWDYLFELGDRQEAN
WADYLNRLAEAGHQRDVNADEKAGMVADVFHSVAGKYDLMNDVMSFGVHR
IWKAFTIQHSSVRRGQKVLDLAGGTGDLAAKFAGRVGPSGQVVLADINDS
MLRVGRDKLIDKGILGNLQYAQVNAEALPFADNTFDCITIAFGLRNVTDK
SKALASMYRVLKPGGRLLVLEFSKPTIKGFATVYDHYSFKILPEMGKFIA
GDADSYRYLAESIRKHPDQETLAGMMRDVGFERVAYHNLTAGVVALHKGF
KI
back to top

mRNA from alignment at scaffold1_size3401120:237451..238562-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-2.22-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1112bp|location=Sequence derived from alignment at scaffold1_size3401120:237451..238562- (Tigriopus kingsejongensis)
ATGCCCCGTCCAACTGAAATTCGATTGCAACAGAAAAGCCGACAACTCGT
TCTAGGTTTTGATAACGACTTCAATTGCACGCTGAGTTGTGAGTATTTGC
GGGTGCACTCGCCTTCGGCAGAGGTGCGCGGTCACGGTGTGGGTCAAGAA
GTCCTGCAGGTAGGCAAAGAGCAGGTGAACATCACGGCAGTTGAGCCCGT
GGGCAACTACGGCGTGAAACTAATCTTTGATGATGGCCACGATTCAGGCA
TCTACAGTTGGGATTACCTGTTCGAGTTGGGCGACCGTCAAGAGGCCAAC
TGGGCAGACTACCTAAACCGGCTGGCTGAAGCCGGGCACCAGCGAGTAAT
CTAATGGCCGTTGAAGAAAAGCAAGACACGACGCACTTTGGTTTCAAGGA
TGTCAACGCCGACGAAAAGGCCGGCATGGTTGCCGACGTATTTCATTCGG
TTGCCGGTAAATACGACCTGATGAACGATGTCATGTCGTTTGGTGTGCAT
CGCATCTGGAAGGCTTTTACTATCCAGCACAGCAGTGTTCGCCGTGGCCA
AAAAGTATTGGACCTCGCGGGCGGTACTGGCGATTTAGCAGCGAAATTCG
CCGGACGCGTGGGGCCTTCTGGGCAAGTAGTGTTGGCCGATATCAACGAC
TCCATGTTGCGTGTGGGCCGAGACAAGCTGATTGACAAGGGTATCTTGGG
CAACCTGCAGTACGCGCAAGTGAACGCAGAGGCATTGCCTTTTGCCGACA
ATACTTTTGACTGCATCACGATCGCGTTTGGTTTGCGTAACGTGACCGAC
AAATCCAAAGCCTTGGCCAGTATGTATCGCGTGCTCAAGCCAGGTGGTCG
GTTGTTGGTGTTGGAATTTTCCAAGCCGACCATTAAAGGCTTTGCCACGG
TCTACGATCATTATTCTTTTAAGATCTTGCCGGAAATGGGTAAGTTCATC
GCGGGTGACGCCGACAGTTATCGTTACTTGGCGGAATCTATTCGCAAGCA
CCCCGATCAAGAAACATTGGCTGGCATGATGCGCGACGTGGGCTTTGAAC
GAGTGGCGTATCACAACCTGACGGCCGGAGTTGTCGCGCTGCACAAGGGT
TTCAAAATCTGA
back to top
Add to Basket