snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:722778..725719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nad mitochondrial-likesnap_masked-scaffold1_size3401120-processed-gene-7.14Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1034snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1034Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1035snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1035Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1036snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:exon:1036Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cds-2021389Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1:cds-2021390Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021391auto2021391Tigriopus kingsejongensispolypeptide
Tk04869Tk04869Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04869

>Tk04869 ID=Tk04869|Name=Tk04869|organism=Tigriopus kingsejongensis|type=polypeptide|length=925bp
MKIGAPRELFEGECRVALTPDSAVQLQKLGYDCVIESGAGDAARFSDDTY
RNAGVEVVADAAALYATADIIARVRAPSLDEVAAMPDGKKLISFLNPAGS
PELLEALRAKNISAMGMEMVPRISRAQKMDALSSMANIAGYRAVIEAGNN
FGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGTAQSLGAIVRAFDVRP
EVAEQIESMGASFVYLDFSEDGAGDGGYAAVSSPEFREKQLECFREQAKE
VDIVITTALIPGRDAPKLWLEDMVLAMKPGSVVVDLAAEKGGNCDLTVMD
EIIESSNGVRVIGYTDFPSRMATQASNLYSTNIRHMMTDLTPDKDGQPNW
NMEDDVIRTSTVTHEGEITFPPPPLKVAAQAKPAVKTVEKTPEEIKAEEA
AAIQKANKQQTMLLVIWNVSHALHTPLMAVTNAISGIVILGALLQVGSDS
GLVTILAAISVLIASINIVGGFMVTRPYIAASVLFILSLGGLSNQEKAKR
AVWFGIAGMAIAVLATVASDKVSGLGWIIPMVAIGAVIGTIVAQRVEMTG
MPQLVAALHCFVGLAAVFIGINSEIDPPQGLDAVEKSIHSVEVYLGVFIG
AITFTGSIIAYGKLAGSIDGKALTLPGRHMINLGMVVVCLILGILFFNHA
GMWTLLLMMLIAFVIGAHLVMAIGGADMPVVVSMLNSYSGWAAAATGFML
GNDLLIVVGALVGSSGAILSYIMCKAMNRNFVSVILGGFGGTSGPAMEID
GEQIAIDAGGVAAALEDADSVVIVPGYGMAVAQAQQSVSELTRRLRAKGK
NVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDLPDTDVVMVI
GSNDTVNPGAQDDPNSPIAGMPVLEVWKAKQVFVSKRGSGTGYSGAENPL
FFKENTRMFYGDAKASVDALLQQIS
back to top

mRNA from alignment at scaffold1_size3401120:722778..725719+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-7.14-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2942bp|location=Sequence derived from alignment at scaffold1_size3401120:722778..725719+ (Tigriopus kingsejongensis)
ATGAAGATTGGTGCACCCAGAGAGCTGTTTGAGGGTGAGTGCCGTGTTGC
ACTCACACCTGACAGTGCGGTTCAGCTTCAAAAGCTGGGCTACGACTGTG
TGATCGAAAGCGGGGCCGGCGATGCCGCTCGTTTTTCCGATGATACTTAC
CGCAACGCCGGTGTGGAAGTGGTGGCTGATGCTGCTGCTCTTTACGCTAC
GGCCGATATAATCGCTCGTGTTCGCGCGCCATCGCTCGATGAAGTCGCGG
CTATGCCGGATGGCAAGAAGCTGATTAGCTTCTTGAATCCTGCAGGCAGC
CCTGAGCTGCTGGAAGCGCTGAGAGCTAAAAATATTTCTGCCATGGGCAT
GGAAATGGTGCCGCGCATCAGCCGAGCCCAGAAGATGGACGCCCTGTCGT
CGATGGCCAATATCGCTGGTTATCGCGCGGTGATTGAGGCGGGCAACAAC
TTCGGTCGCTTCTTCACGGGTCAGATTACCGCTGCTGGTAAAGTGCCACC
GGCCAAAGTGTTGGTTATTGGTGCGGGTGTCGCAGGTCTTGCTGCTATCG
GTACCGCTCAATCCTTGGGCGCCATCGTGCGCGCATTTGACGTTCGCCCC
GAAGTGGCTGAGCAGATCGAATCCATGGGCGCGTCATTTGTCTATCTCGA
CTTCTCTGAAGACGGTGCCGGTGACGGCGGTTACGCCGCGGTTTCTAGCC
CTGAATTCCGTGAGAAGCAGCTCGAATGCTTCCGCGAGCAGGCCAAAGAA
GTCGATATCGTGATCACTACGGCGCTTATCCCGGGTCGTGATGCACCGAA
GCTGTGGCTAGAAGACATGGTCTTAGCCATGAAACCTGGTTCTGTCGTGG
TAGATTTGGCCGCCGAGAAGGGCGGCAACTGTGATTTGACGGTGATGGAT
GAAATCATTGAATCTTCCAACGGCGTACGCGTGATCGGTTACACCGATTT
TCCTAGCCGTATGGCCACGCAGGCCTCTAACCTCTACTCCACCAATATTC
GTCACATGATGACGGACCTGACCCCTGATAAAGACGGTCAGCCGAATTGG
AATATGGAAGACGATGTGATTCGCACTTCCACGGTGACGCATGAGGGTGA
AATCACCTTCCCGCCGCCGCCGTTGAAAGTTGCGGCTCAGGCTAAACCTG
CTGTCAAAACTGTTGAAAAAACACCAGAAGAGATCAAAGCAGAAGAAGCT
GCAGCGATTCAAAAGGCCAACAAGCAGCAGACGATGCTGTTGGTGGGTGG
TGGTTTGTTGATGCTGTTAATCGGCGCTTATGCACCGGCTAGCTTCATGC
AGCACTTCATTGTGTTTGTACTGTCTTGCTTTATCGGCTTTCAGGTTATC
TGGAACGTCAGCCATGCGCTGCACACGCCGTTGATGGCGGTCACCAACGC
GATCTCAGGCATCGTGATCTTGGGAGCATTGTTGCAAGTCGGTTCAGACT
CCGGCCTCGTCACTATCCTCGCCGCGATCTCCGTTTTGATCGCCAGTATC
AACATCGTCGGTGGCTTTATGGTCACGCGTCGTATGTTGGCTATGTTCCA
GAAGAGCTGAGATAAATCATGAGCACAGGATTAGTTACTGCAGCGTATAT
CGCTGCGAGCGTTCTCTTCATACTCAGCCTCGGTGGTTTGAGTAACCAAG
AAAAAGCCAAGCGCGCCGTTTGGTTTGGCATTGCCGGTATGGCGATCGCT
GTATTGGCCACCGTCGCTTCAGACAAGGTCTCTGGCCTCGGTTGGATCAT
CCCCATGGTCGCCATCGGTGCCGTGATCGGTACTATCGTCGCTCAACGCG
TCGAGATGACGGGTATGCCGCAGTTGGTTGCCGCCTTGCACTGTTTTGTG
GGCTTGGCTGCGGTGTTTATCGGGATCAACTCCGAGATCGATCCGCCACA
AGGTTTGGATGCAGTAGAGAAGAGCATTCACTCGGTTGAGGTATATCTCG
GTGTGTTTATCGGTGCGATCACCTTCACCGGTTCTATCATTGCCTACGGC
AAGCTCGCTGGCAGCATCGACGGCAAGGCGCTCACGCTACCCGGTCGTCA
CATGATCAACCTCGGCATGGTCGTGGTGTGTTTGATCCTCGGCATCCTAT
TCTTCAACCACGCTGGTATGTGGACACTGTTGTTGATGATGCTCATCGCT
TTCGTGATTGGCGCGCATTTGGTCATGGCAATCGGTGGTGCGGATATGCC
CGTGGTTGTATCTATGTTGAACAGCTACTCGGGCTGGGCCGCTGCTGCAA
CGGGCTTCATGCTCGGTAACGATCTGTTGATTGTTGTCGGTGCGTTGGTC
GGTTCTTCCGGTGCAATCCTTTCTTACATCATGTGTAAGGCGATGAACCG
TAACTTTGTCTCGGTTATCTTGGGTGGCTTCGGTGGCACTTCAGGCCCTG
CGATGGAAATCGACGGCGAGCAGATCGCTATCGATGCCGGCGGTGTGGCT
GCAGCGCTCGAAGATGCAGACAGTGTGGTTATCGTGCCGGGCTACGGCAT
GGCGGTGGCACAGGCGCAGCAGTCTGTTTCCGAGCTCACACGTCGTCTGC
GAGCCAAGGGCAAGAACGTTCGCTTTGCAATTCACCCCGTTGCGGGTCGC
TTGCCAGGCCACATGAATGTCTTATTGGCGGAAGCGAAAGTCCCGTATGA
CATCGTGCTGGAAATGGACGAAATCAACGACGACCTGCCCGATACAGATG
TGGTCATGGTCATAGGTTCTAATGACACCGTTAACCCTGGTGCGCAGGAT
GATCCTAACAGTCCGATCGCGGGTATGCCGGTGCTAGAAGTGTGGAAAGC
GAAGCAGGTATTCGTCTCCAAGCGTGGCTCGGGCACAGGCTACTCGGGTG
CTGAGAACCCGTTGTTCTTCAAAGAGAACACACGCATGTTCTACGGCGAT
GCTAAGGCATCTGTCGATGCGTTGTTGCAGCAGATCAGCTAA
back to top
Add to Basket