snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1, snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1
Unique Namesnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold212_size255419supercontigscaffold212_size255419:90476..97533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein TcasGA2_TC000797snap_masked-scaffold212_size255419-processed-gene-1.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:817snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:817Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:818snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:818Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:819snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:819Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:820snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:820Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:821snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:821Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:822snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:822Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:823snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:exon:823Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991391Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991392Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991393Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991394Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991395Tigriopus kingsejongensisexon
snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1:cds-1991396Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1991397auto1991397Tigriopus kingsejongensispolypeptide
Tk00545Tk00545Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00545

>Tk00545 ID=Tk00545|Name=Tk00545|organism=Tigriopus kingsejongensis|type=polypeptide|length=963bp
MLSSSMGASSLVVDAEAGADDAKHLSSSKVPIEEERKSSPIPDEEQAEEE
DCEEAGAAYAGGHRKSECFGHQGSSADWSAEAYSRAHIFIPSSSSGRLKC
VACRIVIAQTEINSLRDDQQCRETFLEGIRKYREKTSVEHHWMERTNLKG
KCKGCGKSFQTKLGFGTSKEVVGVSCSWCKYSYHMKDTCQKYKDEDDSCD
LGVHKSVIVPPSWILKVPRKGSFKSSLKNSPNKNRRRKAEASSPTSEDIS
RPFCIKPIPDNKICPVLVFLNPKSGGNQGAKLMQKFQWLLNPRQVFDLTQ
GGPQPAIEMFRKVPNLKLLACGGDGTVGWLLSVLDKFQIEPMPAVSVLPL
GTGNDLSRSLGWGGGYIDEPISKIISSLQNAEEVMMDRWQVQVTRNDYQS
SDTRGKDSLPLTVVNNYFSMGVDAHIALEFHEAREANPQKFSSRIRNKIY
YGQAGGKDLLLRKWKDLSADIEVICDGQDITPRLRELKVHSVLFANIPSF
GSGTHPWDPAKGAQKINDGLIEVIGLTTYQLPMLQGGLHGSCITQCKSAS
IRTYKTISMQVDGEAIRLNPATIELSFLNQVKMLAKRKGHGKSKITYVDS
DTPLKIPVSRILMRDYVAHHQDKDKLKEMAKPVGEITATAKADLNEVREL
IKKSLENNPGPNQGDHHIRDWCFIDALTAIRFFRIDRAQEGLHYLIDICD
EDSILYIVLNDEDDHLFRTVEEPLLLDSPIVAEIPLPQAPALDRPTRHHP
TPEEPNAIECEEKRDVFLEVNSAPRAKDPRVTTVSDCDTTFGNLNVTSIR
TSPHPSPTIQQVLEKTTEGILKAARLGDLKMLRELHNEGYSLLSIDETGK
TALHYGARFGNKEVVKYLIAHAPPSILDLIDNEKGQTALHKAASYKRRTI
SCMLVAAGASLLINDNGSLTPRQLACLAEDNELASYLESQEEFQREKADG
LVQNNSGDFETPV
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mRNA from alignment at scaffold212_size255419:90476..97533+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1 ID=snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1|Name=snap_masked-scaffold212_size255419-processed-gene-1.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7058bp|location=Sequence derived from alignment at scaffold212_size255419:90476..97533+ (Tigriopus kingsejongensis)
ATGCTCTCTAGCTCCATGGGAGCCTCCAGCTTGGTGGTCGACGCCGAGGC
CGGAGGTGGAGGCGAGACCCAAGAAGGCAAGTGTCCAATGATTAGCGGCA
GGCTGTTTTGGGTTCCATAACCGACAGGGTTCGACAATTGTATAGCGTAC
GCCATTGAGACCGATGAATGACTAAACTCTATGAAAGCATTCACATAGTT
CATTGATGGCTCAATAACCAGTCAAAGCATTGTGGGACTCACAAAGCGCC
ATACGGATGCATTCATGAAGGCGATCTTTTCACGCCATGGCTGTCCTCTC
AACCGTATTTGGTTGAAATAAGGTGCATACAATTTGAATTTTTGAAAGAC
TGAGATGTCCGAAAACCTTATATGGCTGGAATGAGGCACAGACAATGAAT
TTTAATACACGTGCGCCAGCATACACATTGGATGGTTAAGGGAGGCTCGG
GATATCGGGGAGAAATTGAAGCCCTCACATGGAAATTGCAAGTTCATGAT
AAACCTTATCAATTAGTCAAAGAGTACATGCAAAAAGGAGAAGATTAAGT
CAATCCCAAAGGCTTTTTCTCAGCCCGCCTTTCCTGGATCACGCTAATGC
GCTATGCATTGATAGCAATAAACCCATTCGACATCTTAAAACGCGATAGA
AATTCTTTGAAGTAAAACAAATCCGCCCAAGTGAAGGAATCGTTGCGTCG
ATATTTGATTGGAGAATAATTAGGCTGGTTCTACCCATGTATGTGTGTGT
GCTGGAAACAACGCATGAACCTGTCTCTCGCAGATTCTCATTAAAGCTTT
TTAGAAAAATTAACCCATGCCGCGTTTTTTGCCAGCTCCGTTTTTTGGGG
CTTTAAAAGCCTTGTTACACTGCAATTACATTACGAAACCTTTACCAAAT
GCCTTCATGCGGACAAAATGCCTCTTTGGGAATCAACTCCAGTCACGGGA
ACTTTGTGGCCGCCTTAGCCACGTGTTTTTCCTGTGTAAATCTGTCAAAT
CCTAATTTTCGCAATGGCATCCTGAATTGTTGGGGCCAGAACAAAAAAAT
CAGAACAGTAATCGGTGCTTTGGTACCGGATCAGGTATGGTGAGTGTGTG
TTTTTGTACTCACTGCGCCATAGATCTTGCTTTATGACCCTTGACGAGGT
CTGTTTCAAGTTCAAAGAGAGCAATTACTGTCAAGACCGACGCTGATGAA
TGTGATTGTGGGAATCGGCATTTTCGTCAATTGTTCGCTATCCAGAGAAC
GAATTGTGCATTAACAATGCACGGAAGCGACTGTGAAGCAATCCCTGCGT
CATTAGGGAAAAGGACCATTCTCCTCCTCCGACGCTGTCCATGAGCCAAT
CATGTCCGATTCGATAAAAAACGTATATCGATCGGTTGAAATCGTGCCCA
CTTCTCGACGGATCACATATGGTACATGCCATTCACGTTTCCGTGAGCGC
AAATATTGCCTTGTTTCCCGTCAGGAGGACATCACGTGTTCTCGCGAGGA
GAACGAGTCTGGCCATTACAAGTCCATTTATGATTAATTTAGCCGACGAT
GCCAAGCACCTGTCATCCTCGAAGGTGCCCATTGAGGAGGAGAGGAAGTC
CTCGCCCATCCCGGACGAGGAGCAGGCCGAGGAGGAGGACTGCGAGGAGG
CCGGAGCGGCTTACGCCGGAGGGCATCGCAAGAGCGAGTGCTTCGGCCAT
CAGGGCTCGTCGGCCGATTGGTCGGCTGAGGCCTACAGCCGAGCCCACAT
ATTCATCCCATCCTCTAGTTCGGGTAAGTCAAGAGTGTCCATGCTCAGTA
CAGGCTTCGGAATCGAAATGGTTTTGTCGCAAAATTATTCTAATCCGGCT
CGCAGCCTTTCCAATATAATGCGGCTTGCTGGGCAGTAAACAAAGACTAT
AAGATGAAATGAAAACATCTAGGGATGGTGAGGCAACATTGATGACTGAC
TTGGGTCACATTCCTAGCCGTTGTTTATCCACTAAATGCAATAAAACAAA
AATATGTCTATTTCAATATATGGTAATTGATAAATGAGCTGTGCATAAAA
AGTATATGTATATATACTACCCCCAACTGATAGCTTGGGGGTATCCAAAT
AAAATCAGCAATAACAATTGTAAATGGATTTGCCGAAAGAATCTGGGAAA
TTGCAAAAATAAACCACAGTGACGGCGAAAAATGTCAATAAATATAACAG
GTTCGTATGAATATCCTTCAAAACCCAGACAAGAAAATAAAGATACATCA
TCGTCCATGATCCGTGTCAAAAAGGCTTGGAAAGGATCGATTAATTGTAA
CAATCTGGAATTTAACAAGTCTCTAATTTGGTCCACCAAGAATCGATGGC
CTTCCACGACGGAGCAGAGAAATTTATAAGCAATGTGACTTGCAAAAATA
GTTTCGGATGCAAATGCGTAAAACTATTCGATCGACCCGACGAGTACAAA
CAGTCTTCTTCTACCATTGGGTTATCCAAGGATCATTGGGTGGTGAGTTC
CAAGCCTCATCTGAAGCATATCTCATGGGGCGTTGCAAGGAAAGAAAAGT
CAAAAGCAATTCATCAATATTCCAGGCCTTCGCAAGGCCCAGTCCGAGCG
ACAAGCCCAATCAGTGGATCCTTTTCCACGTGCTTATTCTTAGCCAGGCG
TTCTGAGTTGTACAGTACAAGATAAATTCCCATCTTATCCTAAGATTGTG
AGGTTGGGACGAGGATTTGAACTCTTTGCGTGAATTCCAGTTGGATTAGA
GTACCTGTTATTTGACCCTTGGACTCTTGTCAGCTCTTGAATGCCCATGT
GAACGTTCATGAGGCCTGCTTTCATTCGGATTTTTTTGAACATAAGGAGG
GATCTGGTAAAAGTGTGATAAGCGACGTCGTGTAAAAGTATGCCATTGGA
TCAATGGCCGTGGCGGGGAGATATGGGGGGGGGGGCATCCATGAAATAGG
CCTCCATAGATGTACCGTAGCTCAATTTTGTGTCGTTGTTTCTTGTAGCC
CTATGTTGCAACAACCTATGTGCTGATTCCACTTCTACCGCAGAGCACAG
TAAGTTGGGAGGTAGATTAATTGAAAGATTCATTCCTCGATGGTAATCGT
TAGCCTATTTCCTGGACTTATTTCGTGCTCTAATGAATAATAGCTACTAT
AGTCGTGCACAACCTCTAGTGTTCTCTACACCACTTTGCAGAAGCAAAAG
GGTGGAGCCCGACGTTAGCAGCCAACTGTGGCCATCTCTGATATCATCCT
CTCACATCGAAACAAGCATTATAATTTACGTTTGACTAGCGACCTTCGTG
TGCACCGACACAAGTTCAACAAATGTTCACTCGAATGTGTGTATCCAGCG
ATTGGCAGAAAAAGTAATAGGGCTGAGATGCGTGATGTTCGCATATTAGC
ACAGTCGTGTAGACTCACCTCTTGCCTAAGAGTACGATCACTACAGACGT
GGGATTTCCAGGCAAATTCTGTTTGACCCAAGTCTCCCCTGTTCACGGTT
TTTGAGGAGGTTCAGCTTTGTAGCATTCAAAATGTAGTTGTTAACCCTCC
CTGAGATCTAATATAGTGCCTGTGTAATCGAATTTACATATCCTACACCT
ATTAAAGTATACGAGCATTCGGCATAGTCTACACTTAGTCAACAGGACAC
TGAAGAAAAATTTAATGGAAGAAAGAAGACAAATATTTCCAATAGAAAAC
TGTACACAAATACCACTATAGAATGTGAAGTATCTTCGAGGCTGTCCTTG
CGAGCAGTATTTACACGGAGGAAAGGAGCTACAAATAAAGTAAAACATAT
GGGTATTTTATTCCGATTTTCCTAAGGTCCCTTTGAGAGTATCCCCTCAA
AAAGCTGTGAAGGTCTCATAAATGTACTTTCTAACTCTGTCAAAGCTAAT
TAATGCCAAACATCCGCCTCATAAACAGGCGATAAAGGACCAATTGAGGC
TTGAGTGTCATGGCCCAGTTATTGACAATTCGTTTACCCGGTTGTCACCA
AATCTACAAAATGCTCTACTGTACCGGTACTGTATATAGTACACTCTGGG
CTTGGTAATAAAAGGTCCCTAGAAGTGTGGCCTAAAAATCCGACGTTGAT
GCATCCCGCTTCCCAATTGACCGGATTTTCGTGTAGTCTCCATTCCCTCC
TTGTGCCTTCCAGGTCGCCTGAAATGTGTGGCTTGCCGGATAGTGATTGC
TCAGACGGAAATCAACAGTCTCAGGGATGACCAGCAATGCCGGGAGACCT
TCCTCGAAGGCATCCGCAAGTATCGCGAAAAGACCTCGGTCGAGCACCAT
TGGATGGAGCGGACCAATCTCAAGGGCAAATGCAAGGGCTGTGGCAAGTC
CTTTCAGACCAAGCTGGGGTTCGGCACCTCGAAGGAGGTGGTGGGGGTGT
CCTGCTCTTGGTGCAAGTACTCGTACCACATGAAGGACACGTGTCAAAAA
TACAAGGACGAGGATGACTCCTGCGACCTCGGGGTTCACAAGTCCGTCAT
CGTGCCGCCCTCGTGGATCCTCAAGGTGCCTCGGAAAGGTAATGAATAAG
CGTGGAACAAAAACTACCCTCGCAGTGTTTCACCCTTAACTCTCAACTAT
CTACTTGCAGGAAGCTTTAAATCCAGTCTGAAGAACAGTCCGAACAAGAA
TCGTCGGAGGAAGGCCGAAGCGTCTTCGCCCACCTCCGAGGACATCTCCC
GACCATTCTGCATCAAGCCCATTCCCGACAATAAGATTTGCCCGGTCCTC
GTCTTCCTCAACCCCAAGTCCGGCGGGAATCAGGGAGCCAAACTCATGCA
AAAATTCCAATGGCTCCTCAACCCGCGCCAAGTGAGTGCTCATCGCCTTC
GTCTCCTCCAAAAGCGGGGATGACCCTCATTTCTTCCTCTCCTCCTTCCA
GGTTTTTGATCTCACTCAAGGCGGACCTCAGCCAGCCATTGAAATGTTCC
GCAAAGTGCCCAACTTGAAGCTCCTGGCCTGCGGCGGAGACGGCACGGTG
GGCTGGTTGCTCTCCGTGCTAGATAAATTTCAAATTGAGCCCATGCCCGC
CGTGAGCGTCTTGCCCTTGGGAACGGGCAACGACCTGAGTCGATCCCTGG
GTAAGTTGTCACTCTACAAGCTCCCTGGGGGGTAGAAAGCTTTAGCGGTC
TGATGCTTGAGTTTCTGTGTTCCAGGCTGGGGTGGAGGCTACATCGATGA
GCCCATTTCCAAGATCATATCCAGCCTCCAGAACGCAGAGGAGGTCATGA
TGGATCGGTGGCAGGTTCAGGTCACCCGAAACGATTACCAATCCTCGGAC
ACCCGGGGAAAGGACTCTCTGCCCTTGACCGTGGTCAACAACTACTTCTC
GATGGGCGTGGACGCGCACATTGCTCTGGAGTTCCACGAGGCCCGCGAGG
CCAATCCCCAGAAGTTCAGCTCGAGGATCAGGAACAAGATATACTATGGC
CAGGCGGGTGGCAAAGACTTACTGCTGAGGAAGTGGAAGGATCTCTCGGC
CGACATCGAGGTCATCTGTGATGGCCAAGATATCACTCCCCGTCTGCGGG
AGCTCAAGGTTCACTCGGTCCTCTTCGCCAATATCCCCTCCTTCGGCTCG
GGAACGCACCCCTGGGACCCCGCCAAGGGCGCCCAAAAGATCAATGACGG
CCTCATCGAGGTCATCGGTCTCACCACATATCAGCTTCCCATGCTCCAAG
GAGGCTTGCACGGCTCGTGCATCACCCAATGCAAATCTGCCTCCATTCGA
ACCTACAAGACCATCTCCATGCAGGTGGACGGGGAGGCCATTCGGCTCAA
TCCTGCCACCATTGAGCTCTCCTTCCTGAATCAGGTTCGAATCTCGATCT
CTGATCTAACGCTTATGTGCCACCTCTCATCCCCCGTCAATCTGTAATTC
TTTCAGGTCAAAATGCTCGCCAAGCGGAAAGGCCACGGCAAGTCGAAGAT
CACCTACGTCGACTCCGACACGCCTCTCAAGATCCCCGTGAGTCGGATTC
TCATGCGGGACTATGTGGCCCATCACCAGGACAAGGACAAGCTCAAGGAG
ATGGCCAAACCCGTGGGTGAGATCACAGCCACGGCCAAGGCTGACCTGAA
CGAGGTGCGGGAGCTGATCAAGAAGTCCTTGGAGAACAATCCGGGACCCA
ATCAGGGGGATCATCACATCCGCGATTGGTGCTTCATCGACGCTCTCACC
GCCATCCGGTTCTTCCGCATCGATCGGGCCCAGGAAGGCTTGCATTACCT
CATCGACATCTGCGACGAGGACTCGATACTCTACATTGTCCTCAACGACG
AGGATGATCACCTCTTCCGAACCGTGGAGGAGCCCCTGCTCCTGGACTCG
CCGATCGTCGCCGAGATCCCTCTGCCCCAGGCTCCTGCCCTGGACCGACC
TACTCGCCACCACCCAACTCCCGAAGAGCCCAATGCAATAGAGTGCGAAG
AGAAGCGCGACGTCTTCCTCGAAGTCAACTCCGCCCCCCGAGCCAAAGAT
CCCCGTGTGACGACGGTCAGCGACTGCGACACGACTTTCGGGAACTTGAA
CGTCACCTCCATCCGAACCTCGCCTCACCCGAGTCCCACCATTCAGCAGG
TGCTGGAGAAGACCACGGAGGGCATTCTCAAGGCTGCACGACTCGGTGAC
CTCAAGATGCTCCGCGAGCTTCACAACGAGGGCTACTCCCTCCTCTCGAT
CGACGAGACCGGGAAGACGGCCCTCCATTATGGGGCCCGCTTCGGAAACA
AGGAGGTGGTCAAGTATCTCATCGCTCACGCTCCACCCTCGATCCTGGAC
CTCATCGACAACGAGAAGGGTCAGACGGCCCTTCACAAGGCGGCCAGCTA
CAAGCGCCGAACCATCTCCTGCATGCTCGTGGCGGCCGGAGCCAGTTTGC
TCATCAACGATAACGGCAGCCTCACGCCGAGGCAGTTGGCCTGCCTCGCC
GAGGACAACGAGCTTGCCTCCTACTTGGAGAGCCAGGAGGAGTTCCAGCG
GGAAAAGGCCGACGGGCTCGTGCAAAACAATTCCGGGGACTTCGAGACCC
CTGTGTAG
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