snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1, snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2149_size19838supercontigscaffold2149_size19838:5551..7074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nad transhydrogenase subunit alphasnap_masked-scaffold2149_size19838-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:exon:1146snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:exon:1146Tigriopus kingsejongensisexon
snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1:cds-1956806Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1956805auto1956805Tigriopus kingsejongensispolypeptide
polypeptide-auto1956807auto1956807Tigriopus kingsejongensispolypeptide
Tk06913Tk06913Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06913

>Tk06913 ID=Tk06913|Name=Tk06913|organism=Tigriopus kingsejongensis|type=polypeptide|length=507bp
MTPASAKDLQKLGYECLIESGAGVSAGFSDTAYADAGVTVVKTAAEMWKT
ADIIAKVRPPSLDETKLMRTGQTLISFFYPAQNKALMDAANAQGSTVIAM
DMVPRISRAQKMDALSSMANIAGYRAVIEAGNNFGRFFTGQVTAAGKVPP
AKVLVVGAGVAGLAAIGTATSLGAITYAFDVRPEVAEQVESMGAEFVFLD
FEEDQQDGAATGGYAAVSSPEFAAAQLAKFREIAPEIDIVITTALIPGRD
APELWTKDMVESMKPGSVIIDLAAERGGNCKLTVMDEKITTENGVIIVGY
TDFPSRMAAQSSTLYATNIRHMMSDLTPEKDGVPQHNMEDDVIRGATAVH
QGAITFPPPPPKVAAIAAQPKKPAPKELTPAEKRAAETAAFKAQTKNQVI
LIGVGAALLLAIGLVAPASFMQHFIVFVLSVFIGFQVIWGVAHSLHTPLM
AVTNAISSIIILGALTQIGSGSALVVILAALAVFMTGINIFGGFLVTRRM
LAMFQKS
back to top

mRNA from alignment at scaffold2149_size19838:5551..7074+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold2149_size19838-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1524bp|location=Sequence derived from alignment at scaffold2149_size19838:5551..7074+ (Tigriopus kingsejongensis)
ATGACCCCGGCTTCGGCCAAGGACCTACAAAAACTTGGTTATGAATGTTT
GATCGAATCCGGGGCTGGGGTCTCTGCCGGGTTCTCGGATACGGCTTATG
CTGACGCAGGTGTCACTGTCGTCAAAACCGCCGCCGAGATGTGGAAAACG
GCTGACATCATCGCCAAAGTCCGCCCGCCATCGCTGGATGAAACCAAGCT
GATGCGCACAGGCCAGACGTTGATTTCCTTCTTCTATCCGGCCCAAAACA
AAGCCCTGATGGACGCTGCAAACGCCCAAGGCTCCACGGTGATTGCCATG
GATATGGTGCCACGGATTTCACGCGCCCAAAAAATGGATGCCTTGTCGTC
GATGGCCAATATCGCAGGCTACCGCGCGGTGATCGAAGCTGGCAATAATT
TTGGCCGCTTCTTTACCGGTCAGGTGACGGCGGCGGGCAAGGTGCCGCCA
GCCAAGGTTCTGGTTGTTGGTGCCGGCGTCGCCGGTTTGGCCGCGATTGG
AACCGCGACATCGCTGGGGGCGATCACCTATGCTTTTGATGTCCGTCCCG
AAGTGGCCGAACAGGTCGAATCAATGGGTGCGGAATTTGTGTTCCTTGAT
TTTGAGGAAGACCAGCAAGACGGCGCGGCCACGGGTGGTTACGCGGCTGT
GTCATCGCCCGAATTTGCGGCTGCGCAATTGGCGAAATTTCGTGAAATCG
CGCCCGAGATCGACATTGTGATCACAACCGCTTTGATCCCGGGCCGTGAT
GCGCCGGAACTCTGGACCAAAGATATGGTCGAGAGCATGAAGCCGGGATC
GGTGATCATCGACCTTGCCGCAGAGCGTGGCGGCAATTGCAAACTGACCG
TGATGGATGAGAAAATCACTACCGAAAACGGTGTGATAATCGTGGGTTAC
ACGGATTTCCCGTCACGGATGGCTGCGCAATCCTCTACATTATACGCGAC
CAACATCCGCCACATGATGAGCGATCTGACCCCCGAAAAAGACGGTGTCC
CACAGCACAACATGGAAGACGATGTGATCCGTGGGGCAACAGCGGTGCAT
CAAGGCGCAATCACGTTCCCGCCGCCACCACCTAAAGTGGCCGCAATCGC
AGCCCAGCCCAAAAAACCGGCCCCCAAAGAACTAACACCGGCCGAAAAAC
GCGCGGCAGAAACCGCAGCATTTAAAGCACAAACCAAGAATCAGGTGATC
TTGATTGGCGTTGGTGCCGCTTTGTTGCTGGCGATCGGTTTGGTCGCCCC
CGCAAGTTTCATGCAGCATTTCATCGTCTTTGTTTTGTCGGTGTTTATCG
GTTTCCAAGTGATCTGGGGTGTGGCCCATTCCCTGCATACGCCGCTGATG
GCGGTCACCAATGCGATCTCCTCGATCATCATTCTGGGTGCGTTGACCCA
GATCGGATCGGGGTCGGCGCTGGTTGTTATTCTGGCGGCTTTGGCCGTGT
TTATGACCGGTATTAATATTTTCGGCGGCTTCCTTGTGACACGGCGTATG
CTCGCCATGTTCCAGAAGTCTTAA
back to top
Add to Basket