snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1, snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1
Unique Name	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2267_size17857	supercontig	scaffold2267_size17857:3123..12663 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
acetate ligase	snap_masked-scaffold2267_size17857-processed-gene-0.1	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1393	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1393	Tigriopus kingsejongensis	exon
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1394	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1394	Tigriopus kingsejongensis	exon
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1395	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:exon:1395	Tigriopus kingsejongensis	exon
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds-1953266	Tigriopus kingsejongensis	exon
snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds	snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1:cds-1953267	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1953268	auto1953268	Tigriopus kingsejongensis	polypeptide
Tk08924	Tk08924	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold2267_size17857:3123..12663-

protein sequence of Tk08924

>Tk08924 ID=Tk08924|Name=Tk08924|organism=Tigriopus kingsejongensis|type=polypeptide|length=163bp
LPKNFGLYDISSTGGGFDPSGKKYKYRYIDQEWVNLPNGQQGAKTIDLKG
IVDEAMEYCPGVESVLVAERIKSDISMKDGRDYWLQPLLDAASADCEVEV
MDAEDPLFILYTSGSTARTIWGDHQRYKDTYFSTFENKYFTGDGALRDAT
GYYRITGRVDDVI

mRNA from alignment at scaffold2267_size17857:3123..12663-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold2267_size17857-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=9541bp|location=Sequence derived from alignment at scaffold2267_size17857:3123..12663- (Tigriopus kingsejongensis)
GGGATACCATTGAGTACTACTTGCCTAAGAACTTTGGTCTTTACGACATC
TCGTCAACTGGTGGAGGATTTGATCCGTCAGGGAAGAAGTACAAATACCG
CTATATAGATCAAGAATGGGTCAACCTACCCAATGGTCAACAGTGGAGAA
TTATTGAAACGCTACCCATCCCTGAAAACGATGGAGAAATGTGCTATGCT
ATGCCATATATTATTGATGGAGTTGGGTCTAGGTCAGGCCTTATTGGTCG
AGGATGCAATTTTCTTCTTGGGGGAGAACAAGAGTATTTTCGCTGTTTCA
AAAGTGACGCTCTAGAGTACTCTGAGGTAGGCGGAGAATGTAGACCAACC
TCCACAAATGAGATTACTGCAGAAGAAGTAAGTATATATCCTAACCCAAC
AGTAGGTCAACTAAAAATAGAAACAGAGGTCGAATTTTCATCCATTAAGG
TATATGATATAGCGGGGCGGACTGTTCTGTCTCGAGCTTTTACCAAAACT
CTTAATTTGGAAGGTATACCAAATGGGATGTATACCGTAGAACTTAATGG
TGAGAAAGGAATATATCAAACCAAGGTAGTGAAAGGTAACTGATGACAAT
CGAGTAGACAGCCCCACTAGCTGTCGCTAGTGGGGTACGCCTTTATTTTT
GTGTTCGCTTCATACGTTCTACAGGCTGAGCAATGTGTTGGCCAGTTGCT
TTCTCGTTTTGATCTTATCTTGCCAACCCATCCGCTAGCGGTGCCTTCCT
TTAAATGTCCGCTGGACATTTACTCTTCAATATCAGTCAGTTATTGACGA
GCCAGTCAGTCGCAGTTCGCCAAGTCAGAATTTGACTAAGTGGTAATAAT
ACAACATAGAAAGGTAGCCTCTTCTAAGGTGATTAGACCATACGGGGATC
AAGCCCGTATCTGCAATTGTCATGCAAGGGACACTTTTGAGATTTTCATG
AAGAAATTCTATATTTCTTGTCACAGAAAAAGAAAGCTAGAACTCCTTAC
TAGTGAAAAGCGTTTTCTTAACCAACCAGAATCACTTGTCATGATTAAAG
CACTACTTTTTACACTCTTGCTTGGCTCTGTCGTTTGTGCACATGCACAG
AATGGAGATAGGCTCTTTGATGACAGTTTCATTCACACCATAGAGATCAC
TTCTAATGATCCGCTATCGTACGAGTCCTTTCACGATAGCTTGCTTACCA
GTTTTTGGGAGTACTATGGCACTTATTTTTTTCTTCCCGGTAAGCCCTAC
CTCAATGCCTCCATTAGTATAGACGGTGTTACGTTAGATGCTGTGGGTGT
CAGATACAAAGGATTATCTACGATGGAGTTTGGTTATGTAAATGGAAAAT
ATCCTTTCAAAATTGATATCAATGAATATGAAAGCGGGCTAAGGTTTGAT
GGGATTAAAAAGATTAACTTAAATACCAACTTATTGGATGTAAGTGCGAT
GCGAGCTAAGCTTGCGTTTGAAATATTTGATAGGATGGGGGTAATTGCAC
CCAGAGCTGCCCATGCTAGAGTAACTGTAAATGGAGTGGATAAAGGGCTC
TTCACGATGGTGGAGCAAATTGATAAAGATTTTCTTCGCACTAATTTCAT
CTCCGACACACTTGGATATTTACATAAGATGAACGCTTTCCTTTTGAGTC
CGGGGGAGCCATTCGTAAATGAAGTCCAATGGCATTCAGACCTCAATGCA
TTGAGAACAAAAAAATCTACTAACAATTATGAACCATTGATCAATCTCTA
CACGGAGATATACAATACAACAGATGCTGAATTTGAAAATGATGTCAATG
GCCTCTTCGATATGGAATCATTTATCAAACAGATGGCCATCAATGCATTG
ATAAGTGATAATGATCACTATTGTACTGCAGGATTAAATCATTACTTGTA
TCTCAATCCTGGTGATAATAAATGGTACATGATACCCTGGGATTATGACT
TGGCTTTTGGTGCTCAAGGGGGAGACTTTGACAATATAGCGAACTGGGAT
TTACTTTATGGTTGTTTACTCACTCAACGGATGATGGCGATACCCGGTTT
AAGAAATCGGTATCACAATGCTCTTTGTGAGGCGATAACCATAGGTATGG
ACAGTACCTGGGTCAATGATCGTATAAATACAATAGGTAATCTTGTAGCC
TCGGATGTTGAGAACGACCCTTTCTTTTGGGACGTAACTGATTACGATAC
CTATTTAGACCAAACTTTTATAGCTCCATTTACGGTTAATGGAAATACTA
ACATAACAGGCATCAGAGCTTATGTTAATGGTCAATACAGCTCAGTGCGG
GCGAGCTTAGCAGCAGAGGGTAAATGATACATACCAAGATTTGAAGTCAT
ACTGTACATCTGAATATGAGAATCATCAATGGATCAACACGCGACGCTGT
TTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGCCAA
ATGTGGTACTTTCCAAACCAAGGTGGTAGTTCCGACAGAAATCAAAATTT
GTCAGCTTCTGAAGGCATACTACATGGCAGAGTTAGATCGGCTGGTGAGG
ATACCAATGCGATATGTGAAGACCAAGAACGTAGCTATCACCATCGTAAA
TGACAGCTTTATGAAAATATTTAAGGCGGTACACAAACTAGATGATCCAA
GTAAACTCAATGAATGGACGGCTGCTATCACTCGCAATACTACCCTAGAT
TATGTAAGAAAGAGAGTCAAATATGACAGACGTCACGAAGATCTAGAGCA
TCATAGCGACGTTGCTATAACTGTCAACTCTGCCCTACAATCATTGACCA
TGCAAGAAATATTAAATCATGTCCATTCTCTGGAAGACAAAGAGAGAGTA
GTATTCTCGATGTATGCAATAGACGGATACAAACATGCTGAAATTGCTAG
TGCTCTTGGTATCACAGAGGGAACATCGAGATGGTACTTAAGTAAAGCAA
GAAATAATCTTCAAATCCTACTAAAAAGACACATGTCATGAGCAAGGATT
GCAACATAAATAAACTGGACAAGTTCTTCGCTGAGAAACTCAATGAAGGA
ACTGTAGATATAGATGCCACTGCAGCATGGGATATACTAGAGCAAGGAAC
GTCAACTACTAAGGTCAGAAAAATATGGGCTTGGAAATATATGGATGCGG
CGATCGGTATGCTACTGACTGCCGGGCTGCTATGGGGACTAGTATTAACC
TAGGGTATAGCTCAAAAGTGGAACCTCATGGGAGGTGCTTAGTTCTACAT
TCTGGAAATTATGACTAGCAAAGGAACGATTATAAAGAAGGTGTTCGTCA
GCTAGATGAAAAAATAATAGTGCAGCACATAAGATAAGCGAGCAATACCG
AATGAGTAGCATTCGGATACTGGTCGTTGTTTTCTTTACAAGTGATCTAT
CACTCCATCATCGTAGGTCACTGTCCATCTCGAATCTATCAGCTGTATTT
CACCTTCAAATGATTTTGTTGTAGAAGGTACAGGTGAGCCTTCATTTGTT
CGAAACTCTAGGGAGAATGTTGCCTTTGTTACGTCTGTCATCACAACATT
TGTGCGGTCATAATCACAAGTGGGAAAGAAGAGAAATAGTGTCGCCACAG
GATCTAATTCTGCGGACATACCATCTGTAATCAGGATATTTCTGAGACCA
TTCTGACCATAAGTGTAAATATCGTCTTCAAAGTTGCCAGCTATTGTTTG
TTGGTCATTAAGGCTAACCTCTATATTGAATATTTCAGATTCAGCGATTT
GAACTCCTTCTTGTTGGAATGCTCGGTAGAACCTGTCATTGTAAACACCC
CAGGCCTTGGTGCAGTCTGTAGATATTTGCAAAGGTATACTTACGCTATT
GGCCGGGTCATCTAGGTCAGTAAGTGTAATATCAAATACACTATCGCAAG
GCATGCCAGTGTCAAAGACTTCTTTATGATACATTTTCATCTGTCTAAAT
ACTCCACCATACTCCGACAGAATGTTTAGCCTTAGCATTTCAGTTGCTTC
TGCATACGAGATGCTATCTATTGTTGTGATCTCTTGATCGCGAGTTGTGT
GGTCGTCATCTTTCGTGCATGATGTGCCAAAAGCTATGAGTGTGCTGAGT
AGAATTAGTATGTTTTTCATGTTTTTGTTTTTAGAATATGTAATATCTCA
CACCAACCATCAGCTGGATATCTTGATAAGTTGTTAATGTATTTTCTCTA
TTGGTTTGGCTAGAGGTAAGTTGATTTGCGAACTGTGACCTATAAGTCCC
CCCTCCAAATATATCTATACCATGTGGTAGTTGATAGGTAACTTTTAGTT
GTGTCTGATAGCTCGCTGTTGGATCGGTATTAAAGACAGTTTGGGTATAA
TCTTTATATACTCTAGCTCCATCGACCCATGTAGGCTTTTGTTCATATTC
TACCTTGTCGATCATGGACACTCCTAGACTTACAGCCGTTTCCAAGCCTA
GTCTTTTTGATAGATGTAGTCTAAGACTATAGCCTGCTGCCAAGTTATCG
TCATCGTATGTTCGTACTATTCGTTCACCTACAAATTCCTCTCCACCGTG
TACTTTGTCATATGTGATGAAAGCCTTTGTACTAAAATACTTCCTTGCTA
GGTGCTCATAGTTCAGGGACAAATGGGTCAATTGTAATTTGCTGCTAGTA
CTGATTGCAAAGCCTTGATCTAGCTCATATTGCTTTCCATAGCCTAGTCC
AATATCTACTGACCAGCGAGGTCGATCTATGGAGTAGCTAGGCATATTGG
CTAGCGATGTAGATAGACCTGAAAATTTATTTTGTAAGCTCGGACTTAGG
TTGGGTACTAGTTCAAAAGATAATGCGGTTCGCTGCTCCATGAGTTTCTT
ACTAGCTTTCTCCGCAGAATTGGGTACTGCTGACTTTTCACTGATGGTAG
TGGATTTATTGACACCCTTGCTTGTAGTATTTTCATAATTGGTGGATGAA
GGCTTGGATATGGTTGTCAAGTGATCGGCTTCGGTAGTGCTTTTTGTTGA
GTTGTTAGAGACTATATCTATACCTGGTTTTGATGCACCTTTTACCCTTC
GCGGAATATTGCTTTCTGCACTAGTCTCAGCACCAGCCCTTGCATTTGCT
ATACTGAATTGATCATCCGTGGCACTTATTCCTTGGCTGTTTGATGTGTC
AGAAGCCCTATCTATAGAATTGTCATTTGGTAGACTTGTAGTTACAACTA
CTGCTGTCTGTTTTGTGGCTGCGGTAGCTGATAGTGCTGCAATAGATTTG
TTATTGTTTGCTGGCTCTTGGTCTCCGTTCTTTTTTGGTGATTTGACATT
TGTATTACTAGATTGCCTATCGCTGATTGCTGCTTCAGAAACTGTGTTGT
TGGATATCACTAGTCCCCATAGCAGCCCGGCAGTCAGTAGCATACCGATC
GCCGCATCCATATATTTCCAAGCCCATATTTTTCTGACCTTAGTAGTTGA
CGTTCCTTGCTCTAGTATATCCCATGCTGCAGTGGCATCTATATCTACAG
TTCCTTCATTGAGTTTCTCAGCGAAGAACTTGTCCAGTTTATTTATGTTG
CAATCCTTGCTCATGACATGTGTCTTTTTAGTAGGATTTGAAGATTATTT
CTTGCTTTACTTAAGTACCATCTCGATGTTCCCTCTGTGATACCAAGAGC
ACTAGCAATTTCAGCATGTTTGTATCCGTCTATTGCATACATCGAGAATA
CTACTCTCTCTTTGTCTTCCAGAGAATGGACATGATTTAATATTTCTTGC
ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTAGGGTA
GTATTGCGAGTGATAGCAGCCGTCCATTCATTGAGTTTACTTGGATCATC
TAGTTTGTGTACCGCCTTAAATAATTTCATAAAGCTGTCATTTACGATGG
TGATAGCTACGTTCTTGGTCTTCACATATCGCATTGGTATCCTCACCAGC
CGATCTAACTCTGCCATGTAGTATGCCTTCTGAGCCATCTTGCCGCCAGT
CTTTAGCTGTTCAAATATGGAGGTCTGCACATTCACTACGTTTGGTCCAT
TTTGAGGATGATATGATATTGCTACTGCCAATGTAATAACTCTTAGTTAC
TATGAAGTCGAAGTGAGGAATGAAACCGTTGGTGGATTGTGGACTTTTAT
TAAAAATATCGAGCGGTGGAGTAGGGAGTAGAGTCTTGACCATGTAAGCT
TACTGTGGAAAGTACCGTATTAGATTGACAAATATTGAGTCAAGAGCCTA
AAGAGAGAGGCTGCTTTTTGAAGTGGCGTAGACTATAGAGCAAATAGAGT
TTGTACCTAATTTTGGTATTGATATAAGTCCTACTTCGCCACCAATACAA
ACTGCTCTTTCACAGAGCTGATCTTATGATCATCGTCAATAAATCTATGT
TCGACTTCGAAGTTGTAGGAGCCGGCGATCTCGGGAGTCCATTTGTATTT
ATTCATATCTAGCTCTTCTCTGTTTATTAGGATTTTTCTGAATGAAGGAT
TATCTACGTAGAAATGTGGATAGATGATGTAGCTGTCTTTCGTTTCTTCT
ATTATAGGTTCATATCTCGTAAAGCAGAAGCAACAGCTTGCATACAAAGT
GCCAACAGATAGTAGTGCTTCCTCATAAAAGTATTCTTTAGCATAAGTTG
CTAGCCTATGATAGTGATCTACGTGGTTAAGTAATTCTTGTTCCCGTACA
TTAGGTTTGTAATAGCCACTAGAGGTTTTGTCCAAGGCGAAGAGAATATC
TTTTTTGAATGAACGTAGATCACGGCGGTCTGCATTGTTAATTAATGCTA
GGAATGGAGCGGCTTCATCATTGAGATCCTTGAAGCTTTTACGAAAGTTT
TCATGGAGCCACATTAATTCGCTGATGTATTTTGAAGACGCTGCTTTTTG
TAGAGCCTCACTTTCGATGAGAGCATATTGATTTTGAATACTCCCATATG
TTTGATACGATGACCATATTTGTACTAAGGTGAATATGCTGACTGTGTAG
TGTGCATAGCTGAGTATGTCTTGGTGTAAGTATTTCATGAGCATTTATTT
ATGGGATGACAGTAGTGTGGAGTTTGTTCTGCTCGCCAGTAGCAAGGTTT
TTCAGTAGCATAGTCAGTGATAAGGTTTCTGGCCTTTTGGGCAATATCAG
AGGTAAGGACGGGATCAGCTGCGGACCTTGCTATATCGTAATAATACTGA
TAATGTTCACTCTCCTGAGCAGCTAGCATTTGGAAATTCAGCTCATGTGT
CTGGCCAATAGCATAGTTTTCTTGTGGTGACTTGAGTTTGATTATTCGAT
GTTTGTTAGTGTCGTCAGAAGCTATTAGACTGTTATAAGTATTGTAGGTG
GTATTCAGAATTGCTCGATCGAGGTTTATTCTGGCGATGTTAGAATCTGC
GGCGGTAAGGTCGTCTTTTTGCAAACCGTACTTCTCTAATAGTTTTTTGC
CGTAAGGGACCGTAGATAGATTGGGGTTGGTTCGTATCAACATTAGGAAG
TCGACCTCATCCAGATATTGGTGCCTGTATTTTTCCCAGCCGTCTTTTCG
GCTAGTGGTATGAAATAGTAAGTCTTTGAAGTTTAAACGCTCATGCTTGA
CATCCTCCGCTATGATCGTAGTGACTTTCTGCAAGTCATCATATTCTCTG
ACAAGAGCATCATCTACTACACAAACAGCAATGTATCCTGCCACGAGCAT
CATGCTCGTAACTAGTGACTTACGACTAAGCATACCAACCTTTTTTGACT
TTAAGAAATGCAAGAAGAAGTTACTTCCTCTCTATTGAACTCCGATAGGA
ATAGAACTGTGAGATCTTGAAATTATTATAGAAGTAAAGAAAGTTAGCTC
CACATTTGGTAAGATATAGATATTAGCATACCTTAATATTCTGCGAAAGC
AGTCTAATCAAAATACAAATATGAGCCACTACCACATACAAAATCTGGAA
GAATATTTTCACCAATACAGAAAGTCCATCAGTGATCCTGCAGCTTTTTG
GAGTGAGATCGCTGAGGAGAACTTTACTTGGAGAAAGAAATGGGAAAATG
CACTTTCATGGGATTTTGCGAAGCCCGAGATCAAATGGTTTGAAGGGGCA
AAATTAAATATTACAGAGAACTGTCTAGATCGGCACCTGGCTACGAGAGG
AGAGCAAACGGCCTTACTTTTCGAGCCTAATGATCCAAAAGAAAGTGCAG
AGCATATCACTTATAATGAGTTGTACAGGAGGGTATGTAAGTTTGCCAAT
GTGCTGAAAAGCAAAGGAGTAGCAACAGGAGATAGGGTGGTGATATACCT
GCCTATGATTCCCGAGTTGGCTGTCGCGATACTTGCTTGTGCTCGGATCG
GGGCGATACACTCTGTAGTTTTTGCTGGCTTCTCTGCTACGGCTCTAAGT
AGTCGGATCAATGACTGTGATGCTAAGATGGTGATCGTATCTGATGGGTC
ATATAGAGGTGCTAAGACCATCGATCTCAAGGGTATCGTAGATGAAGCCA
TGGAGTATTGCCCTGGAGTAGAAAGTGTATTGGTGGCTGAGCGGATCAAG
TCTGATATCTCAATGAAGGACGGTCGAGATTATTGGCTCCAGCCGCTGCT
AGATGCCGCCTCTGCGGACTGCGAAGTGGAAGTGATGGATGCTGAAGATC
CACTATTTATATTATATACATCGGGCTCTACAGGTAAGCCTAAGGGGATG
CTGCATACCACGGCTGGCTACATGGTGTATAGTGCCTATACATTCAAAAA
TGTATTCAATTATAAGGATGGCGACATCTACTGGTGTACTGCAGATATTG
GGTGGATCACTGGCCATAGCTACATCGTGTATGGGCCACTTGCCAATGGT
GCCACCACAATGATGTTTGAAGGAGTGCCTAGCTACCCAGATTGTGGACG
GTTTTGGCAGATCGTAGAAAAGCACAAAGTGAATCAGTTTTACACAGCTC
CTACGGCGATCAGGGCATTGGCAAAAGAAAATGTGGCCTTAGTCAATAAA
TATGATTTGTCGTCGCTAAAAGTATTGGGGACTGTAGGAGAACCGATCAA
TGAAGAAGCTTGGCATTGGTACGATGAAAATGTAGGTAAGAAAAAATCTC
CAATTGTAGATACTTGGTTTCAGACTGAGACGGGTGGTATTCTCATAAGC
CCACTACCATATTGCACTCCTACAAAACCTACCTTCGCCACATTGCCATT
GCCAGGTATAGCTCCTGTCTTGATGGATGAAAATGGACAAGAAGTACATG
GCAATCAAGTCGATGGGCGGCTCTGCATAAAGTTACCTTGGCCTTCTATA
GCTCGGACGATCTGGGGCGATCATCAACGATACAAGGACACCTACTTTTC
TACTTTTGAAAATAAATATTTCACTGGCGACGGTGCACTCAGAGATGCCA
CGGGCTACTATAGGATCACGGGTAGGGTCGACGACGTGATT

Add to Basket

Search form