snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1, snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1
Unique Namesnap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold228_size248166supercontigscaffold228_size248166:210845..213145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
cytoplasmic type 5snap_masked-scaffold228_size248166-processed-gene-1.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:711snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:711Tigriopus kingsejongensisexon
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:712snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:712Tigriopus kingsejongensisexon
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:713snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:exon:713Tigriopus kingsejongensisexon
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cdssnap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cdssnap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cds-2010317Tigriopus kingsejongensisexon
snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cdssnap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1:cds-2010318Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2010319auto2010319Tigriopus kingsejongensispolypeptide
Tk04323Tk04323Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04323

>Tk04323 ID=Tk04323|Name=Tk04323|organism=Tigriopus kingsejongensis|type=polypeptide|length=466bp
MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGK
KDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTT
GIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYS
FTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIID
VGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVL
SGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASL
STFQQMWITKQEFDEAGPGIVHRKMDPGDLGFNYLIDKEKNFGSAVRINS
LYFQRNQGEIMSARYTTSNHVEIPEGLRRQLLSRRDVGHSRDLLNNRVVD
HCRDQLNRGMWTFAGI
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mRNA from alignment at scaffold228_size248166:210845..213145+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1 ID=snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1|Name=snap_masked-scaffold228_size248166-processed-gene-1.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2301bp|location=Sequence derived from alignment at scaffold228_size248166:210845..213145+ (Tigriopus kingsejongensis)
ATGTACGACGATGAAATTGCCGCCCTGGTCGTGGACAATGGCTCCGGAAT
GTGTAAGGCCGGTTTCGCTGGAGACGATGCGCCTCGGGCCGTGTTCCCCT
CCATCGTGGGCCGACCTCGGCACGTGGGCGTGATGGTGGGCATGGGTAAG
AAGGATTCCTACATCGGGGAGGAGGCCCAATCCAAGCGGGGTATCCTGTC
TCTGCGATATCCCATTGAGCACGGGATCGTGACCAATTGGGATGACATGG
AGAAAATCTACCATCACACCTTCTACAACGAGCTGAGAGTTGCCCCCGAG
GAGCATCCGGTCCTCTTGACTGAGGCTCCCCTCAACCCCAAGGCCAACCG
AGAGAAGATGACCCAAATTATGTTCGAGACCTTCAATGTGCCCGCCATGT
ATGTCAACATCCAAGCTGTCTTGTCGCTCTACGCTTCTGGCCGAACCACG
GGCATTGTCATGGACTCAGGTGATGGGGTCACCCATACCGTGCCCATCTA
CGAGGGATACTCTCTGCCCCATGCCATTCTTCGAGTGGACTTGGCCGGCC
GCGATCTCACCGACTATCTCATGAGAATCCTCCGGGAGAGAGGCTATTCC
TTCACCAACACTGCTGAGCGGGAGATTGTCCGGGATATCAAGGAGAAGTT
GTGCTACGTGGCCACCGATTTTGAGGATGAAATGACGACAGCTGCCCGGA
GTTCGGCTATAACTCAGAAATATGAGCTTCCCGATGGACAAATCATCGAC
GTGGGCAATGAGCGTTTCCGTTGCCCAGAGGCCCTTTTCCAGCCTGCTTA
CTTGGGCATGGAGTCCTGCGGTGTCCACGAAACGGTTTTCAACTCGATTA
TGAGATGCGATGTGGACATTAGGAAGGACTTGTACTCGAACATTGTCTTG
TCCGGAGGCAGCACCATGTACCCGGGTATCGCTGACCGCATGCATAAGGA
GCTGGATCACTTGGCACCCTCGTCCATGAAGATCAAGATCATCGCCCCAC
CGGAAAGGAAATACTCTGTCTGGATTGGGGGATCCATTCTGGCCTCTCTG
TCCACGTTCCAGCAGATGTGGATCACCAAGCAAGAGTTTGATGAGGCAGG
ACCGGGCATCGTTCACCGAAAGTGTTTCTAGAAACATCAATAAGCACTAG
TACAATCTGATGTCAAGGTAGCTTAATGAAGCGCCATCTAGCGTCATCAT
CTCGAAATAAAACAACTCTAAAATCAATTATGTACTTTGCCCTAAGTGAA
AATATATCAAGCAGAAACAGATGTTCATATTGAGCAAAACACAGAATAGA
AAAATGTTTCATTTCAAGATTTTCAGAATGGATCTAGGTGATTTTCTATC
AAATACAGTAGTTTTAACATTAAAGGGACAAATTACTTTGTTTTTGTTGG
TATTTGAGAGCCTTTTTGCAACTCTGCACTCGCCCAGGGTTGGCAACTGC
TGTTGCCAAATGACATATCCTCATGCTTCCTCCACTAGCACGGTAATTCA
CTTGCTAAACGTTCCAAATCGATCCCATTGTTCTCCAAAACCTCCAAAAC
CTTCTGACATGGATAACTCATGGCTCATGGGGAGAATACGTCAATAAGAT
ATCCTTTTTGGTGTTGAAAATATATCAAGCCGAAACAGATAGTTCATATT
GAACAATACACAGAATAGATAAATATTTCATTTCAAGAGTTTCAGAATGG
ATCCAGGTGATCTCGGGTTCAACTACCTCATTGATAAGGAAAAGGTGCCA
ACGGAAGAAGGCTCCCTGTGATTGAATTGAACTTGCTGTGTCCTCATTTG
TTGGTGCCAAAGTGCTCATTGGGCACAACTAAAGCTCTGTGTATTCCTAT
ATTTATATAGATCCAGAGCTTTAGGCACTACCACGCACGACGATTGGTAC
ATTCTTTGTTTTAATGAAATTCCTGAACGATTAAAGAAGCCCTAATATTT
CAGGTCAAATCGGATAAAACTGGGTCAAAATTGGGTCAAATTGATGTTAA
GGTTAAATCAGCGAAAAAATGTATACAATTAGTTGAGGCAACCAACCAAC
GGGCATGATTCCACTCCCAGAACTTTGGTTCAGCGGTTCGAATCAACTCC
TTGTATTTTCAACGCAATCAGGGCGAAATCATGTCCGCCCGCTACACGAC
TTCCAACCATGTAGAAATTCCTGAGGGACTTCGCCGGCAGTTGCTAAGTC
GCCGGGATGTTGGCCATAGCCGGGACCTGCTCAATAACCGGGTTGTGGAC
CATTGTCGGGATCAGCTCAACCGCGGGATGTGGACCTTCGCCGGTATCTA
G
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