|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold241_size241811 | supercontig | scaffold241_size241811:125480..127622 + |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:564 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:564 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:565 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:565 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:566 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:566 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:567 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:567 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:568 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:568 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:569 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:569 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:570 | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:570 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998701 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998702 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998703 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998704 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998705 | Tigriopus kingsejongensis | exon |
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds | snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998706 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk11759 >Tk11759 ID=Tk11759|Name=Tk11759|organism=Tigriopus kingsejongensis|type=polypeptide|length=517bp
MTYLQSKPILNHDTPRGESAKSESIQIMDTNRMIEIVRNLQRGARAIHIT FNALNNHFNAMNLVQISKTLTTLMSQVQEFIFDYNLKRSLSSLDGLNNSE THASAVVDRLKLCAHRCQYTPQQPLGEIKRILAALDKGFNNLVDMMLSRE MQMLLRELDTPSSEISLRSALNTIILLGNEGSNHLCSLLSREGGVRCLLR HCQLIYSPVFANGNLNTSQMGPGNLPADEIRILALRGLSSICCVAECIRE FEQCGGLKVIHELLCTRQSSMEDRIESAGVLAQITSPWISDNHKIHNLDS FVFDMVGSLSGLAKMNNGEETFLLVTAALANLTFMSPATSAAMKRFASVK ILVKAVQVSPFTTLFAKDQVVTVMANMAANSNCRHDICSMNGVEFLLSML ETKVTSQLSQAELAAAERVQKKAAIALSRLCNNNEVCIEVIRLGGIDRLV ELCKDSSERNYSDAVLVACLAVLRRLKANLSDPQMRSLFEDLNASDLIQP KLVDSFLEYSAKQESYV back to topmRNA from alignment at scaffold241_size241811:125480..127622+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1 ID=snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1|Name=snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2143bp|location=Sequence derived from alignment at scaffold241_size241811:125480..127622+ (Tigriopus kingsejongensis) ATGACCTACCTCCAAAGCAAACCCATCCTCAACCACGACACGCCCAGGGG
AGAGTCCGCCAAGTCAGAGTCCATCCAAATCATGGACACAAACCGAATGA
TCGAGATCGTCCGCAATCTTCAACGAGGAGCCAGGGCCATCCACATCACC
TTCAACGCTTTAAACAAGTAGGGAGACAATCAGGGCGACAATCCTCCTCA
TTCCTAGCGTAGAATCATTCAGGCGTAGAATGTTGGCGCCAAATGTTGAT
GACGAGAAGTTCCGTGAATGTTGTCTGACACGTTGCGTTTTTTCCTTGCA
GTCACTTCAATGCCATGAATCTGGTTCAAATTAGCAAGACGCTCACCACT
CTCATGTCCCAAGTCCAGGAATTCATCTTTGACTACAATCTAAAGCGATC
GCTCAGCAGTTTAGACGGGCTCAACAACTCAGAAACCCACGCCAGCGCGG
TGGGATGGAACTTTCCGGGGCTCAAAAGCCATAGGAACGCAGCATCTAGT
CATGATATCTCCCAGAACTCGCAAAAATTCAATGAGATCCTCCTGCTCCA
ACAACGAACTGTCCTTCAGGTACAGACTTGATCCTCGTTTCTGCTCTTGC
TGTGTTGTCCTTCAACCCGTTTATTCATGCCAATTTTCCAGGTTGTGGAC
CGACTTAAGTTGTGCGCCCATCGTTGTCAATACACACCTCAACAGCCTCT
GGGAGAGATCAAGCGGATACTAGCTGCCCTAGACAAAGGGTTCAACAATC
TCGTGGACATGATGCTGAGCCGAGAAATGCAAATGCTGCTCCGGGAGCTG
GATACGCCGTCTTCGGAAATCAGTCTCCGCTCCGCCTTGAACACCATCAT
CCTTCTGGGCAATGAAGGATCCAACCACCTGTGTTCCCTATTATCCCGGG
AAGGCGGCGTGCGGTGTCTCTTGAGACATTGTCAGCTTATTTACTCGCCG
GTTTTCGCCAATGGCAATCTGAACACGAGTCAAATGGGACCAGGCAACCT
TCCCGCCGACGAAATCCGGATTTTGGCGTTGCGTGGACTCAGTTCCATTT
GCTGCGTGGCCGAATGCATCCGAGAATTTGAACAGGTAAGGCCAGTGTAG
GTGTGTTCCAGTGGAGCAGCCGACTTATTTCCCAATTTTATTCCAGTGCG
GTGGGCTGAAGGTAATCCACGAGCTCCTCTGCACGCGACAATCTTCAATG
GAAGATCGAATCGAGAGTGCTGGAGTGTTGGCTCAGATCACCTCGCCTTG
GATCAGTGACAACCATAAGATCCACAACCTGGACTCTTTCGTCTTTGACA
TGGTGGGATCGTTGTCGGGTAAGTGACTACCATCCGGATGGACAGCTCTA
GGAACTTGAGTAACCACCCCTTCCTCTATCCTAGGTCTGGCCAAAATGAA
CAACGGAGAAGAGACATTTCTCTTGGTCACGGCGGCCTTGGCCAATCTCA
CCTTCATGTCTCCGGCCACATCAGCCGCGATGAAGCGATTTGCCAGCGTC
AAAATTCTCGTCAAAGCTGTCCAGGTCTCTCCATTTACCACCCTCTTTGC
CAAGGATCAGGTATGTGCCAAATACACCCCAAGGACTATAGGGACTTTGA
GGAGGATATTGTAACCTTTACTCATTACCTTCAGGTTGTGACTGTGATGG
CCAACATGGCAGCCAACTCCAATTGCCGCCATGACATATGTTCCATGAAT
GGAGTGGAATTTCTCCTCTCGATGCTGGAGACCAAGGTCACATCCCAGCT
TAGTCAAGCCGAATTGGCCGCGGCTGAGCGGGTTCAGAAGAAGGCCGCTA
TCGCCTTATCAAGGTACGGCAGCTCTGGTAAAAATCCAGTTGAATCTGAA
TTGACGGCCCCAACTCATGTTCCAGGTTGTGCAATAATAATGAGGTTTGT
ATAGAGGTGATCCGATTGGGCGGAATCGATCGTTTGGTGGAACTCTGCAA
AGACTCCAGTGAGCGGAACTACAGTGATGCCGTATTGGTGGCCTGTCTGG
CCGTCCTGAGACGGCTGAAGGCGAACCTGAGCGATCCACAAATGCGATCC
CTCTTCGAGGACTTGAACGCCTCCGATCTGATCCAGCCCAAGTTAGTGGA
TTCCTTCTTGGAGTACAGTGCCAAGCAAGAAAGCTATGTCTAG back to top
|