snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1, snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1
Unique Namesnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold241_size241811supercontigscaffold241_size241811:125480..127622 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
conserved hypothetical proteinsnap_masked-scaffold241_size241811-processed-gene-1.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:564snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:564Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:565snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:565Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:566snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:566Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:567snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:567Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:568snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:568Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:569snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:569Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:570snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:exon:570Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998701Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998702Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998703Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998704Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998705Tigriopus kingsejongensisexon
snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1:cds-1998706Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1998707auto1998707Tigriopus kingsejongensispolypeptide
Tk11759Tk11759Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11759

>Tk11759 ID=Tk11759|Name=Tk11759|organism=Tigriopus kingsejongensis|type=polypeptide|length=517bp
MTYLQSKPILNHDTPRGESAKSESIQIMDTNRMIEIVRNLQRGARAIHIT
FNALNNHFNAMNLVQISKTLTTLMSQVQEFIFDYNLKRSLSSLDGLNNSE
THASAVVDRLKLCAHRCQYTPQQPLGEIKRILAALDKGFNNLVDMMLSRE
MQMLLRELDTPSSEISLRSALNTIILLGNEGSNHLCSLLSREGGVRCLLR
HCQLIYSPVFANGNLNTSQMGPGNLPADEIRILALRGLSSICCVAECIRE
FEQCGGLKVIHELLCTRQSSMEDRIESAGVLAQITSPWISDNHKIHNLDS
FVFDMVGSLSGLAKMNNGEETFLLVTAALANLTFMSPATSAAMKRFASVK
ILVKAVQVSPFTTLFAKDQVVTVMANMAANSNCRHDICSMNGVEFLLSML
ETKVTSQLSQAELAAAERVQKKAAIALSRLCNNNEVCIEVIRLGGIDRLV
ELCKDSSERNYSDAVLVACLAVLRRLKANLSDPQMRSLFEDLNASDLIQP
KLVDSFLEYSAKQESYV
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mRNA from alignment at scaffold241_size241811:125480..127622+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1 ID=snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1|Name=snap_masked-scaffold241_size241811-processed-gene-1.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2143bp|location=Sequence derived from alignment at scaffold241_size241811:125480..127622+ (Tigriopus kingsejongensis)
ATGACCTACCTCCAAAGCAAACCCATCCTCAACCACGACACGCCCAGGGG AGAGTCCGCCAAGTCAGAGTCCATCCAAATCATGGACACAAACCGAATGA TCGAGATCGTCCGCAATCTTCAACGAGGAGCCAGGGCCATCCACATCACC TTCAACGCTTTAAACAAGTAGGGAGACAATCAGGGCGACAATCCTCCTCA TTCCTAGCGTAGAATCATTCAGGCGTAGAATGTTGGCGCCAAATGTTGAT GACGAGAAGTTCCGTGAATGTTGTCTGACACGTTGCGTTTTTTCCTTGCA GTCACTTCAATGCCATGAATCTGGTTCAAATTAGCAAGACGCTCACCACT CTCATGTCCCAAGTCCAGGAATTCATCTTTGACTACAATCTAAAGCGATC GCTCAGCAGTTTAGACGGGCTCAACAACTCAGAAACCCACGCCAGCGCGG TGGGATGGAACTTTCCGGGGCTCAAAAGCCATAGGAACGCAGCATCTAGT CATGATATCTCCCAGAACTCGCAAAAATTCAATGAGATCCTCCTGCTCCA ACAACGAACTGTCCTTCAGGTACAGACTTGATCCTCGTTTCTGCTCTTGC TGTGTTGTCCTTCAACCCGTTTATTCATGCCAATTTTCCAGGTTGTGGAC CGACTTAAGTTGTGCGCCCATCGTTGTCAATACACACCTCAACAGCCTCT GGGAGAGATCAAGCGGATACTAGCTGCCCTAGACAAAGGGTTCAACAATC TCGTGGACATGATGCTGAGCCGAGAAATGCAAATGCTGCTCCGGGAGCTG GATACGCCGTCTTCGGAAATCAGTCTCCGCTCCGCCTTGAACACCATCAT CCTTCTGGGCAATGAAGGATCCAACCACCTGTGTTCCCTATTATCCCGGG AAGGCGGCGTGCGGTGTCTCTTGAGACATTGTCAGCTTATTTACTCGCCG GTTTTCGCCAATGGCAATCTGAACACGAGTCAAATGGGACCAGGCAACCT TCCCGCCGACGAAATCCGGATTTTGGCGTTGCGTGGACTCAGTTCCATTT GCTGCGTGGCCGAATGCATCCGAGAATTTGAACAGGTAAGGCCAGTGTAG GTGTGTTCCAGTGGAGCAGCCGACTTATTTCCCAATTTTATTCCAGTGCG GTGGGCTGAAGGTAATCCACGAGCTCCTCTGCACGCGACAATCTTCAATG GAAGATCGAATCGAGAGTGCTGGAGTGTTGGCTCAGATCACCTCGCCTTG GATCAGTGACAACCATAAGATCCACAACCTGGACTCTTTCGTCTTTGACA TGGTGGGATCGTTGTCGGGTAAGTGACTACCATCCGGATGGACAGCTCTA GGAACTTGAGTAACCACCCCTTCCTCTATCCTAGGTCTGGCCAAAATGAA CAACGGAGAAGAGACATTTCTCTTGGTCACGGCGGCCTTGGCCAATCTCA CCTTCATGTCTCCGGCCACATCAGCCGCGATGAAGCGATTTGCCAGCGTC AAAATTCTCGTCAAAGCTGTCCAGGTCTCTCCATTTACCACCCTCTTTGC CAAGGATCAGGTATGTGCCAAATACACCCCAAGGACTATAGGGACTTTGA GGAGGATATTGTAACCTTTACTCATTACCTTCAGGTTGTGACTGTGATGG CCAACATGGCAGCCAACTCCAATTGCCGCCATGACATATGTTCCATGAAT GGAGTGGAATTTCTCCTCTCGATGCTGGAGACCAAGGTCACATCCCAGCT TAGTCAAGCCGAATTGGCCGCGGCTGAGCGGGTTCAGAAGAAGGCCGCTA TCGCCTTATCAAGGTACGGCAGCTCTGGTAAAAATCCAGTTGAATCTGAA TTGACGGCCCCAACTCATGTTCCAGGTTGTGCAATAATAATGAGGTTTGT ATAGAGGTGATCCGATTGGGCGGAATCGATCGTTTGGTGGAACTCTGCAA AGACTCCAGTGAGCGGAACTACAGTGATGCCGTATTGGTGGCCTGTCTGG CCGTCCTGAGACGGCTGAAGGCGAACCTGAGCGATCCACAAATGCGATCC CTCTTCGAGGACTTGAACGCCTCCGATCTGATCCAGCCCAAGTTAGTGGA TTCCTTCTTGGAGTACAGTGCCAAGCAAGAAAGCTATGTCTAG
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