snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1, snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1
Unique Namesnap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold244_size240795supercontigscaffold244_size240795:143159..145387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein CAPTEDRAFT_227457snap_masked-scaffold244_size240795-processed-gene-1.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1397snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1397Tigriopus kingsejongensisexon
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1398snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1398Tigriopus kingsejongensisexon
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1399snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:exon:1399Tigriopus kingsejongensisexon
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:five_prime_utrsnap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:cdssnap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:cdssnap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1:cds-2001764Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2001765auto2001765Tigriopus kingsejongensispolypeptide
Tk02096Tk02096Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02096

>Tk02096 ID=Tk02096|Name=Tk02096|organism=Tigriopus kingsejongensis|type=polypeptide|length=552bp
LLAVAQEALKAPNMTFSPFIMEPVKSGLKRLKLVPWRGVLAVVGGFLIQL
TLGSYNSFANIMPYMVSYMRKYSEDDVEQLKYTNFIIVQSAWGVTQGCVL
PIGSLLVRIIGVRVSVALGSVLFVTAPMITSWTIQKQLWNVVLSYGVIAS
VGQNLAIIPTLTIPMAWFPHRRGLVSGVVVSGFGMGALLFNQFQTRMVNP
RNLPVSRNGTDAGYFVDDEILLQVPSLLIYSGALYAVLLGIGACLLLSLR
PPPPAASPPITSKAVEAKANTPLWSIHTRDPVVMLAFHHKSELAPAYSLH
ADSRSSLSSSWHTIQKAWIRSNLRASLSPLERILSRREFYLLWVTRFGLV
MISQGFFGLYKAFGLKELGYNDDFLSGVGALAAVFNCMGRFGFGYLLDRI
PYKTLMLFESMLVLVLSSTFYTVANLSQYGMAASLWLLNLFVAGVFSMHP
AVCNKIFGPNLDSMAIGLVGSSDIVNNLLIGFLSRPLMASLGWAGYFLCI
SSLTIIVIVATLVFPKSSPKYSTDEEKDAHSNATMSEDLSVQSKNLSEVT
KL
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mRNA from alignment at scaffold244_size240795:143159..145387+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1 ID=snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1|Name=snap_masked-scaffold244_size240795-processed-gene-1.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2229bp|location=Sequence derived from alignment at scaffold244_size240795:143159..145387+ (Tigriopus kingsejongensis)
AGCAGACGTGCGAGTCAAGAAGTGCAAGCCAAGGCGATTGTTGGCTGTGG
CACAAGAAGCACTCAAAGCCCCCAACATGACCTTCAGCCCCTTCATCATG
GAGCCGGTCAAATCCGGTCTCAAGCGACTGAAGTTGGTCCCCTGGCGCGG
GGTTCTGGCCGTTGTGGGCGGATTCCTCATCCAGCTCACCCTCGGTTCAT
ACAACAGGTAGGGACAATGGGAAAGCGATTAGGTGGACCGGTATTCATAG
GTTGGGTCATGTTATGCTTGTAGCTTCGCCAACATCATGCCATACATGGT
GTCCTATATGAGGAAGTACTCGGAGGACGACGTGGAACAATTAAAGTACA
CCAACTTCATCATTGTGCAGTCCGCCTGGGGCGTCACGCAAGGCTGCGTG
TTGCCCATTGGCAGCCTTCTCGTCAGGATCATCGGCGTCCGAGTGTCAGT
GGCCCTAGGATCCGTTCTCTTCGTAACTGCGCCCATGATCACCTCGTGGA
CCATTCAGAAACAATTGTGGAACGTAGTATTGTCCTATGGCGTGATTGCC
TCCGTGGGACAGAACTTGGCCATCATTCCCACACTCACCATCCCGATGGC
CTGGTTTCCCCACCGACGCGGACTCGTGTCTGGGGTGGTCGTCTCGGGTT
TCGGCATGGGCGCCCTGCTGTTCAACCAGTTCCAGACCCGCATGGTTAAC
CCTAGGAATTTGCCCGTGTCCAGAAATGGAACGGATGCGGGATACTTTGT
GGATGACGAGATCCTGCTCCAAGTGCCGTCGCTGCTCATCTACTCGGGCG
CCCTGTATGCGGTCCTGCTGGGAATCGGAGCTTGTCTCTTGCTCAGCTTG
AGGCCGCCGCCTCCAGCAGCCTCCCCACCCATAACCTCCAAAGCGGTCGA
GGCCAAGGCTAACACACCCTTGTGGTCCATTCACACTCGGGACCCCGTGG
TAATGCTGGCCTTCCACCACAAGTCTGAACTGGCACCCGCCTACTCCCTC
CACGCAGATTCCAGATCCTCCCTGTCATCATCGTGGCACACCATTCAAAA
GGCGTGGATTAGATCTAATCTGAGAGCCTCATTGAGTCCTCTTGAGCGTA
TATTGAGCCGGCGCGAATTCTATCTCCTCTGGGTCACCAGATTTGGACTG
GTCATGATTTCCCAAGGGTTCTTCGGCCTCTACAAAGCCTTCGGCCTCAA
AGAGTTGGGCTATAATGATGATTTCCTCTCCGGAGTGGGCGCCCTCGCAG
CCGTCTTCAATTGCATGGGTCGCTTTGGATTCGGCTATCTCTTGGACAGG
ATCCCCTACAAGTAAGTATGCGCCAGCGGGCACACACTGTGTTACTACCA
GCCAAGAACTCTGCTCTAATCTATAAAATGCAGTCCTCGCCCCACTCAAC
CTAGTTACACACACACACACACACTGCCCTGGACACATTCATTGTCCGTG
GTAGCTGTCCCACCCTCTGTGAGGCCTCTCTTGAATTGAACTAGCACAAT
GGAACTCTTTAGCCTCCGGTTGCGTAGGAGTACGAGTACATTCAACAGTG
TTAACCCCACGTGGAGTGGAGACTCTGAACCTGATTTCCATTTCATTCCA
CTCTTCCTCTTTCAGGACATTAATGCTTTTCGAGAGCATGCTCGTCTTAG
TCTTGTCCTCGACCTTCTACACGGTGGCCAATCTGAGCCAGTATGGCATG
GCAGCCTCGCTCTGGCTCCTCAACCTCTTCGTGGCCGGGGTCTTCTCCAT
GCACCCGGCCGTGTGTAATAAAATTTTCGGTCCTAATCTGGACTCAATGG
CAATTGGACTCGTTGGATCCAGCGACATTGTCAATAATCTCCTTATCGGA
TTTCTCAGCCGGCCTCTCATGGCCTCATTGGGCTGGGCCGGATATTTTCT
GTGCATATCCAGCCTCACCATTATTGTTATCGTTGCCACTCTTGTGTTTC
CAAAGAGCTCTCCAAAGTATAGCACAGACGAGGAGAAGGACGCTCATTCA
AATGCAACTATGTCAGAAGATTTGTCAGTTCAGTCCAAAAATTTGTCAGA
GGTCACCAAGTTGTAGGAGTTACACTTGGCGTGTGTCATCGAGCCGGTCG
AGTCGCTGGTTCTAGTGGAGGATCTGCAAGCCTTTACAAGACGCCCCAAA
TCACTACCTTGTCTTAACAATTAATTATATGCCGAGAATAACGTGCTCTC
CCGCTCAATACTAATGGTTTTCATTACGT
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