snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1, snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1
Unique Namesnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold257_size234952supercontigscaffold257_size234952:68538..75367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
e3 ubiquitin-protein ligase mib1snap_masked-scaffold257_size234952-processed-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:384snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:384Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:385snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:385Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:386snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:386Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:387snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:387Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:388snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:388Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:389snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:389Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:390snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:390Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:391snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:exon:391Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985182Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985183Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985184Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985185Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985186Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985187Tigriopus kingsejongensisexon
snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1:cds-1985188Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1985189auto1985189Tigriopus kingsejongensispolypeptide
Tk12561Tk12561Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12561

>Tk12561 ID=Tk12561|Name=Tk12561|organism=Tigriopus kingsejongensis|type=polypeptide|length=711bp
MEGSNPLNTSANTPATLPTPPVPASAVAPMNSASLAPNNPMTTGTAGTAP
MALNSALAAASAGGGQAAAASVVASSRSTRFMMEGVGARVIRGVDWKWGK
QDGGEGHVGTVRNFESPEEVVVVWDNGTAANYRCSGAFDLRVLDSAATGL
KHDGSMCDTCRQQPIFGIRWKCAECTNYDLCSMCYHGDKHHLRHRFFRIT
SVGTERVLLEPRRKSKKIPIRGIFPGARVIRGVDWQWEDQDGGNGRRGKV
TEVQDWSAASPKSAAYVIWDTGAKNLYRVGFEGQADLKAVSDAKGGTVYK
DHLPLLGESGPGRSGPHGLQVGDQVNVDLELEIVQHLQHGHGGWTDGMYE
CLGQTGTVAGIDEDHDIVVSYPSGNRWTFNPAVLTKVSGPLLPPLASNLA
TFSATGSSEGGGSGQHFSVGDFVQICSDIERIKVFQRGHGEWAEAMAPTL
GMIGRVQQIYHDNDLKVEVCGTSWTYNPGAVAKVANDGSIPGASSGERLS
ALLKKLFETHVSGDVTEELVKAAANGDAQKMEELLGREECNVNGVFAGHT
ALQAASQNGHLEKLFETHVSGDVTEELVKAAANGDAQKMEELLGREECNV
NGVFAGHTALQAASQNGHLEVIRILIRHKAELEIEDKDGDRAVHHAAFGD
EPTVMELLAHAGADLNARNKRRQTALHIAVNKGHVGVVKILLDLQCHPSL
QVKSLVRYLSR
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mRNA from alignment at scaffold257_size234952:68538..75367-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold257_size234952-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6830bp|location=Sequence derived from alignment at scaffold257_size234952:68538..75367- (Tigriopus kingsejongensis)
ATGGAGGGGAGCAACCCCCTCAACACGAGCGCCAACACACCGGCCACCTT
GCCCACGCCACCCGTGCCCGCCAGCGCCGTGGCTCCCATGAACTCGGCTT
CGCTCGCGCCTAATAATCCAATGACCACGGGCACGGCGGGCACGGCGCCC
ATGGCCTTGAATTCGGCCTTGGCCGCCGCATCAGCCGGAGGCGGTCAGGC
TGCGGCCGCCTCGGTGGTGGCCAGCTCCCGATCGACGCGGTTCATGATGG
AAGGCGTGGGCGCTCGTGTCATCCGGGGCGTGGACTGGAAATGGGGCAAG
CAGGTCAGCGCCACCTCCACCCTCTATGTAGAGTGGAGAACACTTGATCA
CGCCCCTGGTGGTTGTTTCTTTATTTCTAGGATGGAGGCGAAGGTCACGT
CGGCACGGTCCGGAACTTCGAGTCGCCCGAGGAGGTGGTGGTGGTGTGGG
ACAATGGCACGGCCGCCAACTATCGATGTTCGGGCGCCTTTGACCTCCGC
GTCTTGGATTCGGCGGCCACGGGCCTCAAACACGATGGTTCCATGTGCGA
TACTTGTCGCCAACAACCCATCTTTGGCATTCGCTGGAAATGCGCCGAAT
GCACCAACTACGATTTGTGCAGCATGTGCTACCACGGTGACAAGCATCAC
TTGCGTCACCGATTCTTCCGCATCACATCTGTGGGCACGGAAAGGTACCC
CGGGCAGAGTGATTAAGCCACCCGATCTATTGGCTCAGACAGGTTGAGCT
AGTCCATGGCCCACCCAACTAAACGCGGACGAATCGAGAGCCAACCGATC
TACCATGTGCAGATCCGACCTGGTTTTTTTTCGGCCTAGCTAGGGGAATT
TCTGGCCCAGACATCGGCTGACCCATGGAAAGCAGAGCTATGACATGATC
GGCCTTCGTGCACAATTTGGCGATGCCTTTGGAGACGAAAATTTGCCTCA
GACATCAAGATTGAGTCCCATAATGAGAACTGGACCCAGAAGTAACTCCA
ATAATGGTATGATCGGTGGCCCTGGTCATTGAAAAAAATGCGTTAATGCA
GTAGCTTACCCATTATAAGATGTTCAGTTCGGGCATAGTCTGAGTACTGG
CTTTGTTACGGATATTGTTCAATTGTATCGCCATCCCAGATTGTACGTCG
AGGGTCTGATTAGATCAAGGACAGGAACAAGCGCAAAGATAGATACAATC
AGCATTGGCCAGGTCAAATGTTCATGAAGAAGTTATGAATCATCTTGGAA
CTCCCTGATGTTTATGATTGATCCATCAGCCTTGGCCACCATGTGCTACA
TTTCTTGCTCAGCCAAGTGAGCAAAACATCGGCCTCGTCAACCGTGTCAG
ACCAGTTGACATTGTTTTTTCTTCGTCTTCCGAATATCCGCCAAATGAAC
TCTGACATCGAATTATTAAGTGTTTGGTAAACAGTGAATCGGACCTGCTT
CCTGGTCCCCTGGGAATGAATGATATTATCAATTTCCATGAGGTTTGATG
CAAATTGTCTACATGGCCATGTTAGGACTTGGATTGTCAACTTCGATACT
AGGCTTGGGTCCGCTCCGTTTTTTTTGGGAGCCGCTCCGACTCCGGTTTT
CTTTTGGAGTCGCTCACTCTGCTCCGGGCCGGCTCCGCGGTTTTTTACGC
TCCGCTCCGAATCCGGTGTACATTCCGAGCCACAAACTCTGTTCCGGAGC
GGATTTTAGAGCTGCCGGAGCGGTTTTCAGATCGGCTGGAACTACTTATT
GGGTAATGAATTAGCATCTGAACACTAATAGGGATAGGTCTTTTGAACCT
TCCTATAAGTGTTTTCGCCAAAATAAACATGTTTTGAAATACCCTGTCCG
AAGTCGGCTCCTGCGAACTGCTCTGGGAGTTTCGGAGTCAGATCCGCTCC
GTTTTGGGGTCGGAGCCCGTGCTGCCTAGCTCCGCTCCGGGAGCAGACCC
AACCCAACTCGATACCCCATAGACTCCCCTATTGACCTCAAATCCCTTTA
CGTTGACCGTGTCCATCTTTAGATATGATCGGATTACCCAATAGCGTCGT
GCGCTTCAGTTTCAGGAATTTTCTTGATACTCATGAAATTCGATGATCGC
GCCAACACCGAGTTATTAGAAGCCTTAGCCCCGAGTTGAAAAGCTAAATC
TTCGCGGGAATAATTGGGAATCCAGGAATGCGCAAACCTAACGCTAATCT
CTGGAATGAACTTTATTTCAGGGTCTTATTGGAGCCCAGGCGAAAATCAA
AAAAGATACCCATCCGCGGGATCTTCCCCGGGGCGCGTGTGATCCGAGGC
GTTGATTGGCAATGGGAGGATCAAGATGGTGGCAATGGTCGTCGTGGGAA
GGTGACCGAGGTCCAAGATTGGTCGGCGGCCAGTCCCAAATCGGCCGCTT
ATGTCATCTGGGACACGGGAGCCAAGAACTTGTATCGTGTGGGCTTCGAG
GGCCAGGCGGATCTGAAGGTAGTGCTCCATAAAGCTCACGGACAAAAATG
ATAAATGACAATGCCCAATTTGAATCCTATCTAACAGGGTTGTTTTTGCG
TGTTTAGGCTGTTTCGGATGCCAAAGGTGGAACAGTGTACAAGGATCACT
TGCCGCTCCTGGGCGAAAGTGGTCCAGGCCGATCCGGACCGCATGGGCTC
CAAGTGGGCGACCAAGTGAATGTTGATTTAGAGTTGGAGATTGTCCAACA
CCTCCAGCACGGACATGGAGGGTGGACGGATGGGATGTATGAATGTCTGG
GTCAGACCGGAACTGTGGCGGGGATCGATGAGGACCACGATATCGTGGTG
TCTTATCCGTCTGGCAACCGATGGACCTTTAATCCAGCCGTTTTAACCAA
GGTAAGCACATGAGGGATCTCTAAGTCGGTCTTTGACATCATGCCACGTC
TATTTTAATCATTGATATATGGCACCTGTCGGAGGCAGAATGCGTTTCCG
AGAACAAATATTCCGAGCATGAGGAACAGACTGTTCCAATGTAATGAGGC
AATCAAAGGGCTCGTGTACTGTTGAAAGCTTGATTGAGTAACTGGGGATT
TTTATACCATAACCATGGAGGGGACGTATTTCGAGGGAACACCTGAATGC
CAAAGAGCATGAAAGACCATTTTGCGAGGCAAATAAATCCTCTTAACTCA
AATTAGTGCGGCTTTAGTGCCTTCATAACGCAGAATTCCTGTCACTCAAA
TCATTTGGGACATCCAAAACGGTTGTCCTTAGGCATAGTCCCAAATATTG
ACGGGTTTCTACCGATTTTTCTTTGAAATTTGTGTAAGAGTTTTCCCTTT
AAACTGACTGGTCTCTATTAAGGTCGGGCCAGAAATAGTCTTCTCTTTTG
GCGGAATGGGAAAGCTAATTCAATTGCCTTGTTTCCCCCCTTTGTCTTGA
AGGTTTCTGGGCCTTTATTACCACCTCTGGCCTCGAATTTGGCAACCTTC
TCGGCCACGGGATCTTCAGAAGGGGGCGGCAGTGGGCAGCACTTCTCGGT
TGGCGACTTCGTCCAAATCTGCTCCGACATCGAAAGAATAAAGGTCTTCC
AACGAGGTCACGGAGAGTGGGCCGAGGCCATGGCGCCCACGCTTGGCATG
ATTGGTCGCGTACAACAGATTTATCATGATAATGACCTCAAGGTGGAGGT
GTGCGGCACGTCTTGGACCTACAACCCGGGGGCTGTGGCCAAAGTGGCCA
ACGACGGATCCATTCCCGGAGCTTCAAGTGGAGGTAAGTGGTAACTAGCA
ACGTGCCATGGTAGAAGCCGCTCTAACGACTTCATTGTTGGAATTTATCA
TGTTTTCTTGCTCCTTGCGCTAGGGAACGAGAGCGGCATGAGAGGGGACA
GGTTTCGGGAGAAGCGGCGAAAGACGTGCTATTGTCGTAATTGTGTTGAT
ATTCGCCAACTAATGCGAGTTCTTGTCAACGGAGTTTATTTGGTCTTTTT
CGGGTGGAAGAGGCAGGAAATGGGAGAAAGAAAAACGAGAAAAAGAGAGC
CAATGATGGAGAAGAAGAAAGATGTGTCAAATGGGAAAGGAACAGCCATT
AGTCCCAGTTCACTTCCAGGACGACGTCGGCGATTTTCAGCCCAAAAGTC
GGTGAAGAATTTTGACGTGAGCCACAAGCCCACTCATTCGTCCTTGTTGA
AGGGCGATGACGGCCTGCGAAATTTTGCTGTTGAAGGGTTTTACTCTCTC
GACACTTCCCCCTCTCCCAAATCAGTCCGAGGAGCCATTGCAAAGGGGAA
ATCGCCCATCCCTATCCTTGGAGCCCTCTAGAGCTTAGTTGGAGATATCC
CATTGTTGCCCAAATTATCACCCCTCCTTCCAAATGCGAACCTCGACGGA
TTTTTTGTGTTAACGATAAGTTTCTTTCCTGGTAAAGGAGCCCTGTAAAT
GCCACTGTAATGGTCAATTGCCAGGTCATCAGCCAGGTAACAAATGGATC
GTAACTCTCGTCCGGTTCGTTGGTCAGAAGGCCACCTCATACGCTGGCTT
TTCAATTATCGAATCTCGTGCCAATGCGGACGGAAGTATCTAATCGCTAA
AACGTGTTTGGCGCCTCTTGGTATTGGCAGTCGACATGTGTAGTATTGCT
GTTCATTCTTATGCTTCAATAAAGCCATCAACGGTGGTAAGATGAGGTTG
ATAGTTTCGGACTGTGGTACGTGTAGTGTACTGTTCCTTGATGATATGCA
GTTTGCTGAGTGATTTCTTTTTAATTGCCGAAAGTCCTGTGACTGTGGAA
TAGTCCAAGGAATGCGTGGATGAGCTGTAGTTCTGCTGAAATATGCTGGC
GATTAAATGTCAAGGGCTTGCTTGCTCCAGCTTCTAATGAGTTTCAGGGG
GAGGGATCTCGTTTATCCCTCAATCCCCTCCATCGCTCTTTTGGGATGGT
GCCGAAATTGAAGTACCTTGATTGCTTCTTGTCACCCTCAGACGCGAGAG
CAGCACTGACATTTGGGTGACATGCCAACTCTCGGCATGCATTGAGCGAC
ACCTAATCTGGAATTGGTTCAAGAGACCGAATTAGGTCAAATGATTATGG
TTGGAAATATCGTTGTCTTCTCTCCTTTCAGAACGTCTCTCTGCCCTTTT
GAAGAAACTCTTCGAAACTCATGTGTCCGGAGATGTAACGGAGGAGCTGG
TCAAAGCTGCGGCCAATGGAGATGCGCAGAAAATGGAGGAATTGCTAGGA
CGCGAGGAATGCAATGTGAATGGAGTCTTTGCCGGCCATACCGCTCTCCA
AGCAGCCTCCCAAAATGGCCATCTGGAGGTACACGCTAACAGCCTTCCTT
AACACCCGTCACAAAAGCACAGATTTATGGCCTCGAGCTTCTAGAGAGTC
GTCCCCTTTGGTCAGGCTGGCTCTTAAGATACACTGTCCTCATTGAAGTA
CACTGCCTAGCCTCTTAAANCTCTCTTTCTTCCTCGACTTCCTCGTCGTC
GTATCGTTGTCTTCTCTCCTTTCAGAACGTCTCTCTGCCCTTTTGAAGAA
ACTCTTCGAAACTCATGTGTCCGGAGATGTAACGGAGGAGCTGGTCAAAG
CTGCGGCCAATGGAGATGCGCAGAAAATGGAGGAATTGCTAGGACGCGAG
GAATGCAATGTGAATGGAGTCTTTGCCGGCCATACCGCTCTCCAAGCAGC
CTCCCAAAATGGCCATCTGGAGGTACACGCTAACAGCCTTCCTTAACACC
CGTCACAAAAGCACAGATTTATGGCCTCGAGCTTCTAGAGAGTCGTCCCC
TTTGGTCAGGCTGGCTCTTAAGATACACTGTCCTCATTGAAGTACACTGC
CTAGCCTCTTAAACCAGGAGGCAGTTTGATCATTGAACGTATGATCTGAC
CTAGATAGCTCTGTCAACCATGAAAGATTATGCATCACCCGCTAATTCAC
TCGTGCAGCTGGGAAATAAGGGGGGAGACTGTTTTTAAAGTAGGAAGTAG
CGTACATTATTTTGTATGTTGCCTTTTCTTTGAAATGCGAGGATTCAGAG
GCGAGTTTCCTATCCAGCACTTGTCTACGCTTCTCCGAAAGAGGGGATCT
TAAGATTGGGGAGGAAGAAGAGAGATAAAATTCTCGACTAATTTGAAATT
GGACACAGGTTTTATGAGGCAGCTTTGATGTCTTGAAAGTGGTGAAAGTC
TGTCAGGTCCTAAAAGGGCTTTTTGAATGGATGCCTTCTCTTTTGTTAAG
GCCAAGAGAGCTTCAAGTAATACTGGACAAGTAAAATAGCCAGCCGTCAA
TTGTACAGAAGAATGTGAATTGAAATCGAGTCTTCGTTTGGGTGCAGTCA
AGGACCTCGGAAAGTCCAGAGGCTCTTGGTATACCATATGCGCTTTGGGC
CAAGTGCAACGTCCTGTCTGAATTGTTTCATTTTCTATCCAATGGCTTCA
CCCTAGATTTGGGATGCCACATTCATTCATTGTGGCAGAGGCTTGGCAAA
CAAAGCTCGTCGCTGGGTGTTTCTCCTTTATCTGGAGGACATTTTTCGTT
CAAGAATTCGTCCCCACGCGCCCATAAATCTATTCCTTATCAAATTTATT
TCAGGTTATCCGCATTCTCATTCGCCATAAGGCCGAACTCGAGATCGAGG
ACAAGGATGGAGACCGGGCCGTTCACCATGCGGCCTTCGGGGATGAGCCG
ACCGTGATGGAACTGCTCGCTCACGCTGGAGCCGACCTGAATGCTCGAAA
CAAGCGAAGGCAGACAGCGCTTCATATAGCGGTTAACAAAGGCCACGTTG
GTGTGGTGAAGATCCTGTTGGACCTTCAGTGCCATCCGTCCCTGCAGGTG
AAATCTCTCGTTAGATATCTCTCGAGGTAG
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