snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1, snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1
Unique Namesnap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold287_size221780supercontigscaffold287_size221780:55553..59218 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nadph oxidasesnap_masked-scaffold287_size221780-processed-gene-0.16Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:90snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:90Tigriopus kingsejongensisexon
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:91snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:91Tigriopus kingsejongensisexon
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:92snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:exon:92Tigriopus kingsejongensisexon
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cdssnap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cdssnap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cds-1980703Tigriopus kingsejongensisexon
snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cdssnap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1:cds-1980704Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1980705auto1980705Tigriopus kingsejongensispolypeptide
Tk01896Tk01896Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01896

>Tk01896 ID=Tk01896|Name=Tk01896|organism=Tigriopus kingsejongensis|type=polypeptide|length=184bp
MAGISITISQILADPWRIVALVWWPIIKRKVSKQTLVCERGTDGVRMHDT
YSGVSDPSNPEYYGGSPNEERADIVELLEAIAYLICQDDVIRPDTLHRIL
SSRGVPCKILRLADKNRDGVVSVEEMMNFIINITNPRQKTELTEDNIKHL
EKVFRENLAKDKEEFTLAEFKKIVPSKNVSIVPS
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mRNA from alignment at scaffold287_size221780:55553..59218-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1 ID=snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1|Name=snap_masked-scaffold287_size221780-processed-gene-0.16-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3666bp|location=Sequence derived from alignment at scaffold287_size221780:55553..59218- (Tigriopus kingsejongensis)
ATGGCCGGTATCAGCATCACCATCTCTCAAATCTTGGCCGACCCATGGCG
GATTGTCGCCCTCGTTTGGTGGCCCATCATCAAGAGGAAAGTGTCAAAAC
AGACATTGGTCTGCGAGAGGGGAACAGATGGCGTTCGGATGTGATGGTTG
ACCATAAGAGTATTTTTTTCATTACCAAATGCAAATGAAGCAGTCAGCCC
CGTAAGCACACGACTAGAATGCTGTAGGATAAACACTTTCCAATTTATTT
GGTCCTCATCATCTGGGCTGAGCTCCTCAAATCGATAATTTGCATGCAAA
TCAAAGTCTGAATGACGAGGGAATGAAGTGCGTGATCGACGTTCTCCATT
GAATTTACAATCACGGAGCCACCGACGGGTCGACGAACAACGCTACAATT
AGACCAATTTTTCCTCAATCCCCTTTTGGTGTACGAGGAATCGGAGAGAG
AGAGAGCGAGGCAGAAGAAGATGTTCCGGAAGTTTGAATTCCTCGAACAA
TTTCGATTGTGATTATCTTCTGAATAGATCACTCAATGCAGTGGTTCAAC
GCATACACACGCACAGAGACCTGAGAAGGGATCGATGAATAGCCATCTAG
ATCTTGATTGATCTTTCAAAAACCGATCCAGTAATAAGTGGGACATCAAA
TCAGAACGGCCATAACAATCATTGGCCCATTGCTTTGAATGGACTCCAGA
CTCCATCGGTACCTCCCAACATCCGGACTTCGACAGCCAGGCCAATTGGG
TGGCCAGTCCAGGACATTGGGAACAATCGACTCCAATGCTCTTCAGGGAA
CTTGATCAGGCCAAAGTTACGTAAACTAACATTCCTACTACATGTACACA
GGCTCAGTGGGTGGGTAGGCGAATGGGGGAATTCCCGAGGGTTCAAATTT
TGGAACAACGTGGAACATTTTTTATGGGGGATGTAACCAGGTGGAACATG
GCTGCTGATCCGAATGAGCTAATTACCCGTCAAGTAGATTGGCAGGCCCT
TTACTCTACTAGTGCGTCTGATGGTCTCAACCACGCAGAGCTGAATACTT
TTGAAGGCGCCGATTCCTTGTCACTTTGTGAGAATTTCCAACGGACTGAG
AGGAATAGAATTGACACTCTCAATGGTCCTTTCTCAAAATCAAAGTGGAG
CTATCGGGTGGTTAATAAGACGACGGAAATACCTCCAAAGGGTGATTAGG
GCTTCGAGAGAATTGGTTCAATATTCGAACACACTAGCTCTGGGCAGATA
AGGCGGGACAATTTCTCAACTAAAGTTTCCCTCTGCCAGATCGCTAAACG
TTCTCGACCATCCTCAATCTGAATTCTCGAAGCAATCCTGCAGGTATCTT
TGGACTCCTTGGATGCGTGTTTCTTGGCTCTTTCTCTTCCCAGTGGACAG
CATCTATGTGTACATGGCAAATTTACTCCACGTTTGGGAACGCACGGAAA
CGAACCGCTCTGGATGCATTTTCATGGGCGAAGGTTTGGAAATCAGACGA
GTGCGAATGAATGAAGTCATGACGATGGCTGATGACCGCTCAAATATCAC
CGGGACAATCAATGAAGAAAGGAGCGTTCTTTTTGTGACGGCCTAGAAAA
ATGGGGCTATCTGCCGTGGGCCATTAGCTTCTCACCCAGGAAACGCACGG
GGAAATGCGTACGCAAGTTGGGGGTCGGCCAGGCATAGGGCCGCATGCAA
AACTGGCCGCGGATTGATTTTGATTGATGAGTCATGCTCAACGTAATAAT
CAATATCCTATTGGGATACCAAGCAGAGTCTGGGTCGTATCGCGAACCCG
CCGGTGAGCACCAAGCAGATTCAGAAGCGCCGCAGAGCACTCCCGACTGA
CGGCTCATGAGTTCATTGATCTTTTTCAGGCACGACACCTACTCCGGGGT
TTCGGATCCGAGCAACCCGGAGTACTACGGCGGTTCGCCCAACGAAGAGC
GGGCGGATATCGTGGAGCTCTTGGAAGCCATCGCCTACCTCATCTGCCAG
GATGACGTCATCCGTCCGGACACCTTGCACCGGATCCTCTCGAGTCGGGG
CGTGCCCTGCAAGATCCTCCGATTGGCCGACAAGAATCGGGACGGAGTCG
TATCCGTTGAGGAGATGATGAACTTCATCATCAACATCACCAATCCGAGG
TGAGTGTGCCCTTCCTGCCGGGGGTGAGGTGCGATGAATGACTCCCAACC
TGCCCATTATGATGTTCTCGTCATGTCCATGGCTCGTTCGAGGCTGTTGG
GAAGGCACATTATCCCCCCACTAAGTCCTGGGATGATCTCGTGTTCATAA
GCAGTTATCCCTGAGTATGTGTAGACGCTCTTGTCTCGACCAGGATCTCC
CGCCCCATTTGGAGGCAAAAGGGGGACGGAGCCAGTCCATTTTGGGTCAA
TTTACTACCCAATCCCCTCCAAGCCCCTTTTATTAGAGTACGGTAACACA
TTCTACAGGAATATCACGCGTCGCCTCTAAAGAACTCCCCATACCATGTC
CTCCTGGGCAGAAGTCGTTTGATTCGCCGTGATCAGATTCGGAATTGAGC
ACTCAGCTGGCCCAAGGGGCTCCTCCGGCAATTGAGCACATGTACACTCT
GATGGCCTTCTTCATCAAGATATCTCACTCATTCATAGCCCCGCTCATCT
GGCGTACGTCGTTCGTAAGGTTGGACTAGCTGCTGCTGCATCTATTGTGT
ACAGTGAGAAACTTGGATCGGCCAGGGCTGAATCTGGAGCGTGAGATATT
TTCGGGGACATCGAAGGCCCAATAGAGACTGAATTAGCCTCTATCAATTC
GAAGAAACCCCCCTCGATCCTATACGTGACTTCCACAAGGAATGGAAGCT
GTCCATCCCTGACAGCTCGAATAGACACACACTGATGAAGACGAGGGATC
CGAGTGGACATATGAAGATATCCAAGAAATGGGGAGAATGGGATTTTGAT
TGGAAACAAAAGTTTTGCTCATAGCCGCCCTCTCTAGTCAAGAGTGATGA
GTGATTGAAAGACGTCGTCTGCTCGGCTCTCTGGCCCATTGTTCTAGCCT
GAATTGTTTTGATTAATCCCCTTTTTGATGATGTGGCAACTAAAAACCAA
TATCTCTGACAGAGTTGAGAGGTGCTCAGCACAGTAGGAGTCCTTCAGGG
ATTGAATCATTCGCCATTGGACTCGATGATCCTGGTGGCCGTGTTGTCGT
GATTTTCCACTCGCGGCTAGTGGGCCAATCGATGGATCCAGTCGGTTCCG
ATTTGGGAATTCACTTCATCTCCATCTTTCATCGCATAACAAAGTCTCCG
GGCTGGAAGTTGGGCCACGTCCTTGGTTGGCCCACCTCTAAGGGCGAGTG
TTCTTACAGTAATACTCGTTCTCGGGCCAACACTTCCCGGGTGGATGAGG
GCGACGGCCGAGAGGAGTCGGGAAGTGGGCCCACCTTGACTCGGCGATGA
CCCCATCGACGCTGTGGGACTAGTCCTTGGACCTTTAAGCCCAATGCTCT
AACGCTCTCTTTGGCTTACAGGCAAAAAACCGAGCTCACCGAGGATAACA
TCAAGCATCTGGAGAAGGTCTTCCGTGAGAACCTGGCCAAGGACAAGGAG
GAGTTCACCCTCGCCGAGTTTAAGAAGATTGTCCCCTCGAAAAATGTGAG
TATAGTGCCCTCGTAG
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