|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold2988_size10843 | supercontig | scaffold2988_size10843:6915..10803 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:exon:496 | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:exon:496 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:exon:497 | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:exon:497 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds-1957925 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds-1957930 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1:cds-1957931 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk09483 >Tk09483 ID=Tk09483|Name=Tk09483|organism=Tigriopus kingsejongensis|type=polypeptide|length=1234bp
MISKPFGPFAALLCSLSALTHSANAQQVLIDFDDGIPGNNRHDSSVRNGG
FEDFNSTNFATTPFWDSVFPAGNASDPTLSARSRTGSLRSFVSGSLGTGT
QIHLAQTIPATAANLEADRSYTFSFYVRQGNGLENLDEGLAALEIVDNLG
DPVLANGSNLLASRSFPIPADNSWGIVRFSTPPLAADSPFIGQSLRIRIQ
GSADITHFIIIDDVSLTSTLGNPVPAPTLPSKPNIVIIYSDDVGYGDIAV
NGSGIVPTPHMDRIANSGIRFTDGHSPASTCTPSRYSMLTGEYAWRTPGT
GIANGNSRLLIRQGSVTLPSMLQQAGYRTAAIGKWHLGLGDSVTDYNATR
IAPGPLEIGFDYWFGIPATNDRVPCVYMENSAIVNLDRLNDPLQVSYSGP
IGNLPTGATNPELNLHYQAESTQHEGTIINGVSRIGWMSGGQSAWWRDED
HADIFAGKTATYIKESVASNQPFFLYFASPDIHAPRLPHERFQGQSPHNW
RGDALLSLDFSTGEVFKQLEDPNGDGDTSDSVLNNTLLIFTSDNGPVGTE
GYLDGFAGRSPLPTDAAPDSEDILPALLGQSATGRNTLITQNNTQNPKGV
RIGNWKYFSNSGNLHDLSSDPAEASNLANSNPQRLAQLQNFLTQSEAIPL
KMPLAAWWPFDGSTGDIEARDLSDFKNGATLSQGATWTSDNGLPHLHFDG
NNARAEVPALAPIAGDFTLSTWARSDSATWTTGGSFFSRRPSFNFGPVSG
GRSIQLQITAADSSTQSITFDLASLPGFDLQDWHHYAATYHATSGTATLF
IDGVNQSSLTFPSNGLTSSETTLSLGSDGTTATLAGDLSDARIYTRALPG
QRLANTASARLADSDQDGMLSDWEHRFDLDPFNPADASADADDDGENNLA
EFLANTSPISSGDASAGLISHWKFDEASGNTALDSRENHNGLLNGSPTRR
SAAGRTFLTFDGTNRSVSVDSFPDLTDSCTVSCWAQSAGENWNVAGALIS
RRPQFIMHPWLGSKRLSFFVFDASGTAINTEIDLADLPNFDLTAWHHYAG
TYDRQSGRIRLFVDGIERATNTTSPGPLSSSTAPLYIGRDFPQTRYLAGS
IDDVKIFNLALTPAQLVTLAEGFDDDQDGLDDSFERQLIEDDANDEFQEL
EDVAPDGDGVTNLQKFIFGTSPLLASDVFKIEPLRFVENEGSRSLEVQIN
ARAGRTYTLQQSSTLTNDWQDIESTPRLSTNRSL back to topmRNA from alignment at scaffold2988_size10843:6915..10803+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold2988_size10843-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3889bp|location=Sequence derived from alignment at scaffold2988_size10843:6915..10803+ (Tigriopus kingsejongensis)
ATGATTTCCAAGCCTTTCGGCCCCTTTGCCGCCCTTCTCTGCTCGCTTTC
CGCCCTCACTCACTCCGCCAATGCCCAGCAAGTCCTCATCGACTTCGACG
ACGGCATTCCCGGAAATAACCGCCACGATAGCAGCGTCCGCAACGGCGGC
TTCGAAGACTTCAACAGCACCAACTTCGCCACCACCCCCTTTTGGGATTC
CGTCTTCCCCGCCGGCAATGCCAGCGACCCCACCCTCTCCGCTCGCTCTC
GCACTGGCTCACTCCGCTCCTTCGTCTCCGGCTCCCTCGGCACCGGCACT
CAGATCCACCTCGCCCAAACCATCCCCGCCACCGCTGCCAATCTCGAAGC
CGACCGTAGCTACACCTTTAGCTTCTACGTGCGCCAAGGCAACGGGCTCG
AGAACCTCGACGAAGGCCTCGCCGCCCTCGAGATCGTCGATAACCTGGGC
GACCCCGTCCTCGCCAACGGCAGCAATCTCCTCGCCTCCCGCAGCTTCCC
CATCCCCGCCGATAACTCCTGGGGAATCGTCCGTTTCTCAACACCGCCGC
TCGCCGCAGACAGCCCCTTCATTGGCCAAAGCCTCCGCATCCGCATCCAA
GGCAGCGCCGATATCACCCACTTCATCATCATCGATGACGTCTCGCTCAC
CTCAACTCTAGGAAACCCCGTACCTGCGCCCACCCTCCCCTCAAAACCCA
ACATCGTCATCATCTACTCTGACGACGTCGGCTACGGAGACATCGCGGTC
AACGGCTCCGGCATCGTCCCCACCCCGCACATGGACCGCATTGCCAACTC
CGGCATCCGCTTCACCGATGGCCACTCCCCCGCCTCCACTTGCACCCCCA
GCCGCTACAGCATGCTCACCGGCGAATACGCCTGGCGGACTCCGGGGACG
GGCATCGCGAACGGCAACAGCCGCCTCCTCATCCGCCAAGGCTCCGTCAC
CCTCCCCTCCATGCTCCAGCAAGCCGGCTACCGCACCGCCGCCATCGGCA
AGTGGCACCTCGGCCTCGGTGACTCCGTGACTGATTACAATGCCACCCGC
ATCGCGCCAGGCCCATTGGAAATCGGCTTCGACTACTGGTTCGGCATCCC
CGCCACCAACGACCGCGTCCCCTGCGTTTACATGGAAAACAGCGCCATCG
TGAATCTCGATCGCCTCAATGATCCCCTCCAAGTCAGCTACTCCGGCCCC
ATCGGCAACCTCCCCACCGGCGCCACGAACCCCGAGCTCAACCTCCACTA
CCAAGCTGAATCCACACAGCACGAGGGCACCATCATCAATGGCGTCAGCC
GCATCGGCTGGATGTCCGGCGGCCAAAGCGCCTGGTGGCGCGATGAAGAC
CACGCCGATATCTTCGCCGGAAAAACCGCCACTTATATCAAAGAAAGCGT
GGCCTCAAATCAACCCTTCTTCCTCTACTTCGCCTCGCCCGATATCCACG
CCCCCCGCCTCCCGCACGAGCGCTTCCAAGGCCAAAGCCCCCACAACTGG
CGCGGCGATGCCCTCCTCTCGCTCGACTTCTCCACCGGTGAAGTCTTCAA
ACAACTCGAAGACCCAAATGGCGACGGCGACACCTCCGACAGCGTCCTCA
ACAACACCCTCCTCATCTTCACCAGCGACAACGGCCCCGTCGGCACCGAG
GGCTATCTCGATGGCTTTGCCGGGCGCTCGGTGAGTGAATTCCCCGATGG
CCACGATAGCAATGGCATCTACATCGGCGGNNNNNNNNNNNNACGAAGGC
GGCACCCGCGTCCCTTTCTTCGCGCAATGGCCCGGCACCATCCCCGCCGG
AATCACCTCCAGCGCCCTCATCAGCCACACCGATTTCATGGCCAGCTTCG
CCACCCTCGTCGGCCAGCCCCTCCCCACCGATGCCGCGCCCGATAGCGAG
GACATCCTCCCCGCCCTCCTCGGCCAAAGCGCCACCGGACGCAACACCCT
CATCACCCAAAACAACACCCAAAACCCCAAAGGCGTGCGCATCGGGAACT
GGAAATACTTCAGCAACAGCGGCAACCTCCACGACCTCAGCAGCGACCCC
GCCGAGGCCAGCAACCTCGCCAACTCCAACCCGCAAAGGCTGGCCCAACT
CCAAAACTTCCTCACCCAATCCGAAGCGATTCCGCTCAAAATGCCCCTCG
CCGCGTGGTGGCCCTTCGATGGCAGCACGGGTGACATTGAAGCCCGCGAT
CTCAGCGATTTTAAAAACGGAGCCACCCTCAGCCAAGGCGCCACCTGGAC
CAGCGACAACGGCCTCCCACACCTCCACTTCGATGGCAACAACGCCCGCG
CCGAGGTGCCCGCCCTCGCCCCCATCGCTGGCGACTTCACCCTCAGCACC
TGGGCCCGCTCGGACTCCGCCACCTGGACCACCGGCGGCTCCTTCTTCTC
CCGCCGCCCCTCCTTTAACTTCGGCCCCGTTAGCGGAGGCCGCAGCATCC
AGCTCCAGATCACTGCCGCCGATTCCAGCACTCAAAGCATCACCTTTGAC
CTCGCCTCCCTCCCCGGCTTCGATCTCCAAGACTGGCATCACTACGCCGC
CACCTATCACGCCACTTCCGGCACCGCCACTCTCTTCATCGACGGCGTAA
ACCAAAGCTCCCTCACCTTCCCCAGCAATGGCCTCACCAGCTCAGAAACC
ACCCTCTCCCTCGGCAGCGATGGCACAACCGCCACCCTCGCCGGCGACCT
CTCAGACGCCCGCATTTACACCCGCGCCCTCCCCGGTCAACGCCTCGCCA
ACACCGCCTCCGCACGCCTCGCCGACTCCGACCAAGACGGCATGCTCTCC
GACTGGGAACACCGCTTTGACCTCGATCCCTTCAACCCCGCCGATGCCTC
CGCAGACGCCGATGATGATGGCGAAAACAACCTCGCCGAGTTCCTCGCCA
ACACCTCCCCAATCAGCTCAGGAGACGCCAGCGCCGGACTCATTTCGCAT
TGGAAATTTGACGAAGCCAGCGGCAACACCGCCCTCGATTCCCGGGAAAA
CCACAATGGCCTCCTCAACGGCAGCCCCACCCGCCGCAGCGCCGCCGGGC
GGACCTTCCTCACCTTCGATGGCACGAACCGCTCAGTCTCGGTCGACTCC
TTTCCAGACCTCACCGATTCATGCACCGTATCCTGCTGGGCCCAGAGCGC
GGGCGAAAACTGGAACGTCGCCGGAGCCCTCATTTCACGCCGCCCCCAGT
TCATCATGCACCCATGGCTCGGCTCCAAACGCCTCTCATTCTTCGTCTTC
GATGCCAGCGGCACCGCCATCAATACCGAGATCGATCTCGCCGACCTCCC
CAACTTTGACCTCACCGCCTGGCATCACTACGCCGGCACTTACGATCGCC
AAAGCGGGCGCATCCGCCTCTTCGTCGATGGCATCGAGCGCGCCACCAAC
ACCACCTCCCCCGGCCCCCTCTCCAGCAGCACCGCCCCCCTTTACATCGG
CCGCGATTTCCCACAGACCCGCTACCTCGCCGGCTCCATTGACGATGTCA
AAATCTTCAACCTCGCCCTCACCCCCGCACAACTCGTCACCCTCGCCGAG
GGCTTCGACGACGACCAAGACGGCCTCGATGACTCCTTCGAGCGCCAGCT
CATCGAAGACGATGCCAACGACGAATTCCAAGAGCTCGAAGACGTCGCCC
CAGATGGCGATGGCGTCACCAACCTCCAAAAATTCATCTTCGGCACCTCG
CCCCTCCTAGCCTCCGATGTCTTCAAAATCGAACCCCTCCGCTTCGTCGA
AAACGAAGGCTCACGCAGCCTCGAAGTCCAGATCAACGCCCGCGCCGGCC
GCACCTACACCCTCCAACAATCCAGCACCCTCACCAACGACTGGCAGGAT
ATCGAAAGCACCCCTCGCCTAAGCACAAATCGTTCCCTC back to top
|
