snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1, snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1
Unique Namesnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold311_size212931supercontigscaffold311_size212931:127533..129732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
peptidyl prolyl cis-trans isomerase bsnap_masked-scaffold311_size212931-processed-gene-1.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1053snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1053Tigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1054snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1054Tigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1055snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1055Tigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1056snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:exon:1056Tigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:five_prime_utrsnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cds-1999003Tigriopus kingsejongensisexon
snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cdssnap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1:cds-1999004Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1999005auto1999005Tigriopus kingsejongensispolypeptide
Tk00658Tk00658Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00658

>Tk00658 ID=Tk00658|Name=Tk00658|organism=Tigriopus kingsejongensis|type=polypeptide|length=305bp
LFVRPGRLAMPQTESGELATVEPSSHSLLGSHRLVAHPLDPRRRSANSLV
SQPSEPHASHHPDTIATSWCAQLSRRNRLIMKLMVAVCLFTACVALILGF
HTSSAADATGPKVTDIVYFDMTIGGEAVGRIEVGLFGNTVPKTAENFKQL
AIGHEKGHYKGSKFHRIIPDFMLQGGDFTRGDGKGFQAERTDSTYVGTGG
RSIYGEKFPDENFKLKHYGAGWLSMANSGKDTNGSQFFITVKATSWLDGR
HVVFGKVIKGMDVVRKIENTKTGQQDRPVADVVIADSGVIDVTEPFAVTK
DDASA
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mRNA from alignment at scaffold311_size212931:127533..129732+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1 ID=snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1|Name=snap_masked-scaffold311_size212931-processed-gene-1.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2200bp|location=Sequence derived from alignment at scaffold311_size212931:127533..129732+ (Tigriopus kingsejongensis)
CGAGTCCCGAACCCCCAGCTCGCAGGCTACCTCCCACAGCGACCCACTTG
TTCGTGCGTCCGGGCCGGCTTGCCATGCCGCAGACTGAGAGTGGTGAGTT
GGCGACGGTCGAGCCCTCGTCGCACTCGTTGCTAGGTTCGCACCGGTTGG
TGGCTCATCCTCTGGATCCCCGTCGTCGCAGCGCCAATTCGCTGGTGTCC
CAACCCTCCGAGCCTCACGCATCGCATCATCCTGACACCATTGCGACCTC
TTGGTGTGCTCAGTTGTCTCGCCGGAATCGACTCATCATGAAGTTAATGG
TGGCGGTCTGTCTCTTCACGGCCTGTGTGGCTCTCATCCTCGGATTCCAT
ACCTCCTCGGCCGCCGATGCCACTGGTCCCAAGGTGAGTTCCCACTAGGT
TCCCTGGCACCCTCCGACGGTTTGATGACTATCGACCCGGTGGATTGGGT
GCCCCAAGACTCGTTGGGGGGGGGGGGGGGGGTGAATGACCGGCTTCTGG
CTTGGAGTTTGAGCCTAATATAAGGCTCTAGAAACGTTGGTAACCCTCCT
GGCTACCCCAGGTATGGGGTTGGTGACTGATGGCTAACTTGGGGTTTTTG
TGTATTTTAGGTCACCGATATCGTGTACTTTGACATGACCATTGGCGGCG
AGGCCGTGGGCCGGATCGAGGTGGGCCTCTTTGGCAACACCGTGCCCAAG
ACGGCTGAGAACTTCAAGCAATTGGCCATCGGACACGAGAAGGGACACTA
CAAGGGCTCCAAGTTCCACCGTATCATCCCAGACTTCATGCTCCAAGGTG
GCGATTTCACTCGCGGCGATGGTAAGGGCTTCCAAGCCGAGCGAACCGAC
TCGACCTATGTAGGTCAGTGATGACGTAACTCTACCTGGGAACTGGTTTA
CTTTCAGGTACCGGTGGTCGCTCCATCTACGGTGAAAAGTTCCCCGACGA
GAACTTCAAGCTCAAGCATTACGGTGCCGGTTGGTTGTCCATGGCCAATT
CTGGCAAAGACACCAACGGCTCCCAGTTCTTCATCACCGTCAAGGCCACC
AGCTGGTTGGACGGCCGCCACGTTGTCTTTGGCAAGGTTATCAAGGTGGG
TCCTAGGTACCCTGCGAGCCGGGCCGATATGCCTTTTTTTAGACTTTTCC
CTTTATTTCTTCCGCCCATGCCATCTGCTCTCATTCTAAATCAATCAACT
GACTTGAAAGCCACAAGTGTGACGCCTCGAATCACGTCACGCCAAGCCAG
CTGGGTTCAATTTGTCACTCGGATGAGTCTCCCCAGATAGATAAGGCTAG
ACCCAATTTTCGGCTTCCAAGTGCCCTGAGACTTTTGCTCTCCCAGTGGC
AGGCACCATTAGATGCAGGCGGTGTATAGGTAGCTCGAACCGGAGTGTCA
CAGTTATTGACTGGACTCTTGACCACAGAAGTTAAAATCAACTTGGATTT
TGTCTCCCTTGAACACTATCAAGGGAGATTGTCTACCCAACGTTCTGCAC
CTTGCACTTGCCTAGTCGATCAGACAAGTTAGAAACCCATTGGTAGTCTC
AATAAGCCGAAGATATTAAACTTGGGTCCTTGCTGTGAGAACATGGGTTG
GCCTCAAGTAGTACAAAATGTTTGATCGGCTTTACTGTGTTCAAGATTTC
CTCTGTGATTGTAAATACAACTTGGAACGTAAAACGTATCAAAACTGTTC
GTAGAGGTGGCAAGGGTCATATCCAGGGACCTAATGCCCTTGCAGACCTT
GGGGCCTCGTTCTTGATTCACCCTCATTCCGCCCGATCCCCATAATCCAT
CATACTTGTCAAAACTGATGCGAGCCAAGTCCCGACTCATTAAATGGCAT
CCCATTTTAAAGTTGGGACCACACATTTCGGCTTGAGAGTTCGAATTGCA
TTTGTGCAACCGGAAAACAATAGCTTATCGCAACAGATCTGAGGAACGAG
TTCTTGACCAGAATGACCATTTGGACTCTTTTCCAGGGTATGGATGTTGT
GAGGAAGATCGAAAACACTAAAACCGGTCAACAAGATCGACCTGTGGCTG
ATGTTGTGATTGCCGATTCCGGTGTGATCGATGTCACCGAGCCCTTCGCC
GTTACCAAGGACGATGCCTCGGCTTAAATCGCGGCACTAAATCATTTTTT
ATTCAACCTTTGTGCATTTTACGAATCAATACATCCTTGTAGAATCACAA
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