snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1, snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold337_size202799supercontigscaffold337_size202799:23895..26659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
t-cell leukemia homeobox protein 2snap_masked-scaffold337_size202799-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:301snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:301Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:302snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:302Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:303snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:303Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:304snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:exon:304Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cds-1967423Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cds-1967424Tigriopus kingsejongensisexon
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1:cds-1967425Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1967426auto1967426Tigriopus kingsejongensispolypeptide
Tk05300Tk05300Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05300

>Tk05300 ID=Tk05300|Name=Tk05300|organism=Tigriopus kingsejongensis|type=polypeptide|length=355bp
MSTTIESTTDHMLPQSKHKQILSFSISNLLHGDHKTRTQSRTHEPCIAAE
SNSEEEDDCETLGTREDELITAKEPVLSQDSLAGDARSVIKVTAHRPLFV
PCSTGGGSFDFAPWLYRPLTLSPPSSGYPMPIPPNVLSSKFAGLPQPRRI
GHPYQNRTPPKRKKPRTSFSRLQICELEKRFHKQKYLASTERATLAKSLK
MTDAQVKTWFQNRRTKWRRQTAEEREQERQAATKYFLSMQLGSIGGVPAP
PLPPHGSLGSALVSQGKEMQALFGDTSSLSSLESLRPWTSSLVTIASSSW
HTIPDEEVKYMCGSTTLIGGSACFEDTFLPLVRAPTLRRLLIHHPRYESN
QFPGT
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mRNA from alignment at scaffold337_size202799:23895..26659+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2765bp|location=Sequence derived from alignment at scaffold337_size202799:23895..26659+ (Tigriopus kingsejongensis)
ATGTCAACAACCATTGAATCCACAACTGATCACATGCTGCCTCAATCCAA
GCACAAGCAGATCTTGTCATTTTCCATATCCAATCTTCTGCATGGTGACC
ACAAGACAAGGACTCAAAGTCGAACTCATGAGCCTTGTATAGCTGCTGAA
TCAAACTCGGAGGAAGAGGATGACTGCGAAACCTTGGGAACGAGGGAGGA
TGAACTAATCACCGCCAAAGAACCAGTTCTCAGCCAAGACTCATTGGCCG
GGGACGCTCGAAGTGTCATCAAGGTCACCGCTCACCGACCCTTGTTCGTT
CCATGTTCCACCGGGGGTGGCTCGTTCGATTTTGCTCCCTGGCTTTACCG
ACCCCTGACTCTTAGCCCGCCTTCCAGTGGATATCCAATGCCCATCCCAC
CGAATGTGCTATCTTCCAAATTTGCAGGTTTGCATTCGAATTTAATCAGG
ATTACTAGGATGGTGCCCGATAATGAGAGCTTATGCACTGGTGTCCCCTT
TTAGGTCTTCCCCAGCCTCGTCGCATTGGTCATCCCTACCAAAATCGCAC
CCCGCCGAAACGGAAGAAGCCGCGGACTTCATTCTCGCGTTTGCAAATCT
GCGAGTTGGAGAAGCGGTTCCACAAGCAGAAGTATTTAGCCTCCACCGAA
CGTGCCACTTTGGCCAAGAGTCTCAAAATGACTGATGCACAAGTCAAGAC
CTGGTTTCAAAATAGGAGAACAAAGTGGAGGTAAGCTCGATTAGTTCACT
TAAGTTAGCGGGGGATTGTGGGTCGTTATCTCGCAATTGAGGCACTTACT
GGAAAAAATGGCCCTAACACTATTGACTAGCATTCGTTTGCCAAGTGTTG
ACTCCCGGGCATAAACCTATTTTAATATGTAAGAAATAAACGATTACACA
CACACTGTACCCTTATGTTGGATTCCCAATCTTTGTGTTCCGTGCCTGCA
TCTGATTTGCAATTAACTGATTTGTACAATAGGCGCTCAATTCAAGGTGT
ACTCTAAGTCAATATCTGTCGGAAAGTGCCGCTTACATTGGGTGCAAGTT
GAAGAGCTGATCCGGCACTGGCAATTCACTAACAGATTGATGCGAGACTG
GATCATTTATTTCCATATGTGCCACAACCAGATGCGTGCCAGAAGAGAAC
AGTTCGCCCCCAAGCTCCGCTCTCATTAATTGGAACCAATATGGCGTTCA
AACTCGATTCATTGGCTGGCTTTGGCTTCAACTCTCTCAAGAGTAGTCTC
ACGTTTGGAGAAAAATGTGACTCCAATTGGAGTAATCTTAAACAAAAGAA
ACACGAAATGAGAGCAATTGAATTAGCTTGCCCATAAATCAGCAATTTAT
CCTCTCGTGATGTTGCTTCTGTTGTTTTCCACATTGAATGGTAGAAGGGC
TGGTTTACAACCAAGCACGTAGAAGGGTGAGTGTTGGATTGAATGTTCCA
TCTCGCTCCTTTCTTCAAAGCCATATTACCCGGAGTCCATCCCTTGATTC
TCGTGATCTCGCCCATCTTCCATTTGAGTATCCGCGTATCTAGCCGGCAA
AATCGTAAAGATCGGAGTTTATTGTGTTGAATGGACAAGATTATTGGGTG
GAACGGGAGCGCAACTGAATTTGACCCTACACTCTAATCAATTCCCACCA
GCCCTTCGCCAGAGATTTGTTTCTAGATCTCAAGGCATGTCCAACATCAA
CTGACCCATTTCAAATCGTGTTTATTCACTAGGTATAATACACACGATTA
CACACACTCTTAAACTATGAAGTTTGGGTCTGGTCGAAATTCGTCGAGTA
CAGAATAGCAGCCCAACGCATTTGAGGGTGCAGGGTATGGGGGATCAAAA
AAGGTTCTGAATATTCTAAATTTCATTGGCCATTGCTCCCCAAAGACCTG
TTAAGCCACTCTCGGAAAGGGATCTCATTTTTCACACTTGGCCATCAATT
TCTCACTCGAGGAGACTCGCATTGTGCACTCTCGCAGTTGATTTCCACCA
ACAGATATCGAGATTGAGCGAGGGTCTATTGGGTAGTCCCTGGTACAACT
CGATCTCTTTTGACTGCGTTACAATAGACCACCAATCGAAAGCATATGCT
CTGGCAAACTTACTTAGATTTGCTTCATCCCCGGCGAACCAGCGAGCAAC
CTGGGACTCAATGGGAGGCCATTCATAAATTTGATATTACACTATACTCG
AATTACTTCCTCCACAGGCGGCAAACGGCAGAGGAGCGGGAACAAGAGCG
TCAAGCCGCCACCAAATACTTCCTCTCGATGCAGCTGGGATCCATTGGAG
GCGTTCCAGCTCCACCCCTTCCTCCCCACGGTTCCCTAGGATCAGCATTA
GTGTCCCAAGGCAAAGAGATGCAAGCGCTCTTTGGCGACACATCTTCGCT
CTCCTCACTAGAGAGTCTGAGGCCTTGGACCTCGAGTTTAGTGGTGCATT
CAAATAATCCTGTACCATCATCCAGAACCCCATCAGGAGCAAATCCAACT
TAATGACCTTTACTCCAACCTCTGTTTCCTACTCTTGTTCCCCTGTGTCA
ATGATTAAATTACACATTGTTCCTAGACGATAGCAAGTTCCTCTTGGCAC
ACTATACCCGATGAGGAGGTGAAGTACATGTGTGGTTCCACCACTCTAAT
CGGTGGCTCTGCCTGTTTTGAGGACACCTTCTTGCCTTTGGTTAGAGCGC
CCACCTTGAGGCGTCTCCTCATCCATCATCCTCGATATGAGAGCAATCAA
TTTCCCGGTACCTAA
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